RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 CDKN2BP42772 138 aa15.93■□□□□ 0.14
CHMP3-203ENST00000409225 ZBED6P86452 979 aa15.93■□□□□ 0.14
CHMP3-203ENST00000409225 GSTM4Q03013 218 aa15.93■□□□□ 0.14
CHMP3-203ENST00000409225 OCA2Q04671 838 aa15.93■□□□□ 0.14
CHMP3-203ENST00000409225 EEF1A2Q05639 463 aaKnown RBP15.93■□□□□ 0.14
CHMP3-203ENST00000409225 TFDP2Q14188 446 aa15.93■□□□□ 0.14
CHMP3-203ENST00000409225 GPR33Q49SQ1 333 aa15.93■□□□□ 0.14
CHMP3-203ENST00000409225 TCTE1Q5JU00 501 aa15.93■□□□□ 0.14
CHMP3-203ENST00000409225 YOD1Q5VVQ6 348 aaPredicted RBP15.93■□□□□ 0.14
CHMP3-203ENST00000409225 ATG9BQ674R7 924 aa15.93■□□□□ 0.14
CHMP3-203ENST00000409225 CNSTQ6PJW8 725 aa15.93■□□□□ 0.14
CHMP3-203ENST00000409225 NDUFAF7Q7L592 441 aa15.93■□□□□ 0.14
CHMP3-203ENST00000409225 TAX1BP1Q86VP1 789 aa15.93■□□□□ 0.14
CHMP3-203ENST00000409225 SUN3Q8TAQ9 357 aa15.93■□□□□ 0.14
CHMP3-203ENST00000409225 SLC35G2Q8TBE7 412 aa15.93■□□□□ 0.14
CHMP3-203ENST00000409225 STT3BQ8TCJ2 826 aa15.93■□□□□ 0.14
CHMP3-203ENST00000409225 P3H4Q92791 437 aa15.93■□□□□ 0.14
CHMP3-203ENST00000409225 DNAJC1Q96KC8 554 aaKnown RBP15.93■□□□□ 0.14
CHMP3-203ENST00000409225 QKIQ96PU8 341 aaKnown RBP eCLIP15.93■□□□□ 0.142e-7■■■■□ 25.7
CHMP3-203ENST00000409225 SELENOSQ9BQE4 189 aa15.93■□□□□ 0.14
CHMP3-203ENST00000409225 GBA3Q9H227 469 aa15.93■□□□□ 0.14
CHMP3-203ENST00000409225 MCCC2Q9HCC0 563 aa15.93■□□□□ 0.14
CHMP3-203ENST00000409225 DDX56Q9NY93 547 aaKnown RBP15.93■□□□□ 0.14
CHMP3-203ENST00000409225 IL1RAPL1Q9NZN1 696 aa15.93■□□□□ 0.14
CHMP3-203ENST00000409225 TRHDEQ9UKU6 1024 aa15.93■□□□□ 0.14
CHMP3-203ENST00000409225 HYOU1Q9Y4L1 999 aa15.93■□□□□ 0.14
CHMP3-203ENST00000409225 PRSS21Q9Y6M0 314 aa15.93■□□□□ 0.14
CHMP3-203ENST00000409225 NCOA6Q14686 2063 aaPredicted RBP15.93■□□□□ 0.14
CHMP3-203ENST00000409225 TRBV5-4A0A0C4DH59 114 aa15.92■□□□□ 0.14
CHMP3-203ENST00000409225 KDM1AO60341 852 aa15.92■□□□□ 0.14
CHMP3-203ENST00000409225 ANXA9O76027 345 aa15.92■□□□□ 0.14
CHMP3-203ENST00000409225 SERPINA7P05543 415 aa15.92■□□□□ 0.14
CHMP3-203ENST00000409225 CD1EP15812 388 aa15.92■□□□□ 0.14
CHMP3-203ENST00000409225 FDXRP22570 491 aa15.92■□□□□ 0.14
CHMP3-203ENST00000409225 PKLRP30613 574 aa15.92■□□□□ 0.14
CHMP3-203ENST00000409225 ADRA1AP35348 466 aa15.92■□□□□ 0.14
CHMP3-203ENST00000409225 RAB28P51157 221 aa15.92■□□□□ 0.14
CHMP3-203ENST00000409225 SYTL3Q4VX76 610 aa15.92■□□□□ 0.14
CHMP3-203ENST00000409225 ZC3H12BQ5HYM0 836 aaKnown RBP15.92■□□□□ 0.14
CHMP3-203ENST00000409225 LRRC38Q5VT99 294 aa15.92■□□□□ 0.14
CHMP3-203ENST00000409225 HIBCHQ6NVY1 386 aaPredicted RBP15.92■□□□□ 0.14
CHMP3-203ENST00000409225 FIGLAQ6QHK4 219 aa15.92■□□□□ 0.14
CHMP3-203ENST00000409225 RANBP10Q6VN20 620 aa15.92■□□□□ 0.14
CHMP3-203ENST00000409225 NCCRP1Q6ZVX7 275 aaPredicted RBP15.92■□□□□ 0.14
CHMP3-203ENST00000409225 ADAMTS18Q8TE60 1221 aa15.92■□□□□ 0.14
CHMP3-203ENST00000409225 MAGED4Q96JG8 741 aa15.92■□□□□ 0.14
CHMP3-203ENST00000409225 SPOCK3Q9BQ16 436 aa15.92■□□□□ 0.14
CHMP3-203ENST00000409225 C10orf88Q9H8K7 445 aa15.92■□□□□ 0.14
CHMP3-203ENST00000409225 ZNF304Q9HCX3 659 aa15.92■□□□□ 0.14
CHMP3-203ENST00000409225 SMARCAL1Q9NZC9 954 aa15.92■□□□□ 0.14
CHMP3-203ENST00000409225 ZNF282Q9UDV7 671 aaPredicted RBP15.92■□□□□ 0.14
CHMP3-203ENST00000409225 CIDEBQ9UHD4 219 aa15.92■□□□□ 0.14
CHMP3-203ENST00000409225 CACNA1CQ13936 2221 aa15.92■□□□□ 0.14
CHMP3-203ENST00000409225 DNHD1Q96M86 4753 aa15.91■□□□□ 0.14
CHMP3-203ENST00000409225 BHMG1C9JSJ3 638 aaPredicted RBP15.91■□□□□ 0.14
CHMP3-203ENST00000409225 PRAMEF2O60811 474 aa15.91■□□□□ 0.14
CHMP3-203ENST00000409225 AP2A2O94973 939 aa15.91■□□□□ 0.14
CHMP3-203ENST00000409225 BMP10O95393 424 aa15.91■□□□□ 0.14
CHMP3-203ENST00000409225 MED26O95402 600 aa15.91■□□□□ 0.14
CHMP3-203ENST00000409225 TMEM253P0C7T8 217 aa15.91■□□□□ 0.14
CHMP3-203ENST00000409225 VSX2P58304 361 aaPredicted RBP15.91■□□□□ 0.14
CHMP3-203ENST00000409225 MSLNQ13421 630 aaPredicted RBP15.91■□□□□ 0.14
CHMP3-203ENST00000409225 DBN1Q16643 649 aa15.91■□□□□ 0.14
CHMP3-203ENST00000409225 FAM214AQ32MH5 1076 aa15.91■□□□□ 0.14
CHMP3-203ENST00000409225 LINC01555Q8NAE3 123 aa15.91■□□□□ 0.14
CHMP3-203ENST00000409225 BPIFA3Q9BQP9 254 aa15.91■□□□□ 0.14
CHMP3-203ENST00000409225 LUC7LQ9NQ29 371 aaKnown RBP15.91■□□□□ 0.14
CHMP3-203ENST00000409225 INTS7Q9NVH2 962 aaKnown RBP15.91■□□□□ 0.14
CHMP3-203ENST00000409225 CAPN11Q9UMQ6 739 aa15.91■□□□□ 0.14
CHMP3-203ENST00000409225 FITM1A5D6W6 292 aa15.9■□□□□ 0.14
CHMP3-203ENST00000409225 FAM227AF5H4B4 570 aa15.9■□□□□ 0.14
CHMP3-203ENST00000409225 ITGAMP11215 1152 aa15.9■□□□□ 0.14
CHMP3-203ENST00000409225 CXCR2P25025 360 aa15.9■□□□□ 0.14
CHMP3-203ENST00000409225 CSE1LP55060 971 aaKnown RBP15.9■□□□□ 0.14
CHMP3-203ENST00000409225 CSNK1G2P78368 415 aa15.9■□□□□ 0.14
CHMP3-203ENST00000409225 WASHC2DQ5SRD0 308 aa15.9■□□□□ 0.14
CHMP3-203ENST00000409225 ITPRIPL1Q6GPH6 555 aa15.9■□□□□ 0.14
CHMP3-203ENST00000409225 MEX3BQ6ZN04 569 aaKnown RBP15.9■□□□□ 0.14
CHMP3-203ENST00000409225 LAPTM4BQ86VI4 370 aa15.9■□□□□ 0.14
CHMP3-203ENST00000409225 TMTC1Q8IUR5 882 aa15.9■□□□□ 0.14
CHMP3-203ENST00000409225 PIANPQ8IYJ0 282 aa15.9■□□□□ 0.14
CHMP3-203ENST00000409225 AMER2Q8N7J2 671 aa15.9■□□□□ 0.14
CHMP3-203ENST00000409225 ZNF285Q96NJ3 590 aa15.9■□□□□ 0.14
CHMP3-203ENST00000409225 IL17FQ96PD4 163 aa15.9■□□□□ 0.14
CHMP3-203ENST00000409225 GPAMQ9HCL2 828 aa15.9■□□□□ 0.14
CHMP3-203ENST00000409225 STOX2Q9P2F5 926 aaPredicted RBP15.9■□□□□ 0.14
CHMP3-203ENST00000409225 MEMO1Q9Y316 297 aa15.9■□□□□ 0.14
CHMP3-203ENST00000409225 LUC7L2Q9Y383 392 aaKnown RBP15.9■□□□□ 0.14
CHMP3-203ENST00000409225 IGHV1-45A0A0A0MS14 117 aa15.89■□□□□ 0.13
CHMP3-203ENST00000409225 SLC5A10A0PJK1 596 aa15.89■□□□□ 0.13
CHMP3-203ENST00000409225 HYKKA2RU49 373 aa15.89■□□□□ 0.13
CHMP3-203ENST00000409225 OR5H15A6NDH6 313 aa15.89■□□□□ 0.13
CHMP3-203ENST00000409225 HACD1B0YJ81 288 aa15.89■□□□□ 0.13
CHMP3-203ENST00000409225 FTH1P02794 183 aa15.89■□□□□ 0.13
CHMP3-203ENST00000409225 HOXB4P17483 251 aaPredicted RBP15.89■□□□□ 0.13
CHMP3-203ENST00000409225 FBLP22087 321 aaKnown RBP15.89■□□□□ 0.13
CHMP3-203ENST00000409225 PSMB4P28070 264 aa15.89■□□□□ 0.13
CHMP3-203ENST00000409225 RBL1P28749 1068 aa15.89■□□□□ 0.13
CHMP3-203ENST00000409225 ART1P52961 327 aa15.89■□□□□ 0.13
CHMP3-203ENST00000409225 EMP2P54851 167 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms