RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 SMPDL3AQ92484 453 aa8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 KCNJ9Q92806 393 aa8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 FKBP10Q96AY3 582 aa8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 RNF31Q96EP0 1072 aa8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 OSBPL9Q96SU4 736 aa8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 SELENOSQ9BQE4 189 aa8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 ING2Q9H160 280 aa8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 FAM60AQ9NP50 221 aa8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 TLK1Q9UKI8 766 aa8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 SNX12Q9UMY4 172 aa8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 MAD1L1Q9Y6D9 718 aa8.74□□□□□ -1.01
SNORD88A-201ENST00000408314 PABPN1LA6NDY0 278 aaKnown RBP8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 DPM1O60762 260 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 NIPSNAP2O75323 286 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 C1orf105O95561 183 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 ALBP02768 609 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 FURINP09958 794 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 TPBGLP0DKB5 382 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 MPC1LP0DKB6 136 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 CBSLP0DN79 551 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 ERVK-10P10266 1014 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 PGAM1P18669 254 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 ARNTP27540 789 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 PEBP1P30086 187 aaKnown RBP8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 RPA3P35244 121 aaPredicted RBP8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 CBSP35520 551 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 PTGIRP43119 386 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 GABRA4P48169 554 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 GRB7Q14451 532 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 SSPNQ14714 243 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 CYP2A13Q16696 494 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 NKAIN1Q4KMZ8 207 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 CTSL3PQ5NE16 218 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 IRAK1BP1Q5VVH5 260 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 MLIPQ5VWP3 458 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 PAPD7Q5XG87 772 aaKnown RBP8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 ZNF385CQ66K41 422 aaPredicted RBP8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 TTC27Q6P3X3 843 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 CNSTQ6PJW8 725 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 FIGLAQ6QHK4 219 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 CES3Q6UWW8 571 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 TMEM135Q86UB9 458 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 CAND1Q86VP6 1230 aaKnown RBP8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 MCATQ8IVS2 390 aaKnown RBP8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 SLC35F6Q8N357 371 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 DNAJC22Q8N4W6 341 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 ZNF655Q8N720 491 aaPredicted RBP8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 EFCAB3Q8N7B9 438 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 LMNTD1Q8N9Z9 388 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 LINC01555Q8NAE3 123 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 CLEC1AQ8NC01 280 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 FBXO15Q8NCQ5 510 aaPredicted RBP8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 OR2Y1Q8NGV0 311 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 ADAMTS17Q8TE56 1095 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 TM9SF4Q92544 642 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 PTERQ96BW5 349 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 BIRC8Q96P09 236 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 GBP5Q96PP8 586 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 MENTQ9BUN1 341 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 TRIM4Q9C037 500 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 EPN3Q9H201 632 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 WDR54Q9H977 334 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 ENAMQ9NRM1 1142 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 C20orf96Q9NUD7 363 aaPredicted RBP8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 ASIC3Q9UHC3 531 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 CRYL1Q9Y2S2 319 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 PTRH2Q9Y3E5 179 aaKnown RBP8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 KLK4Q9Y5K2 254 aa8.73□□□□□ -1.01
SNORD88A-201ENST00000408314 TCRBV7S3A2A0A539 114 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 H3BMH7 237 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 GOLGA8MH3BSY2 632 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 MYO1CO00159 1063 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 TXNDC9O14530 226 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 DSCR3O14972 297 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 ZBTB14O43829 449 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 AVILO75366 819 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 PSIP1O75475 530 aaKnown RBP8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 MATN4O95460 622 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 CAPN1P07384 714 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 ALAS2P22557 587 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 OTX2P32243 289 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 SKIV2L2P42285 1042 aaKnown RBP8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 MAGEA3P43357 314 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 BDKRB1P46663 353 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 RGS4P49798 205 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 TERF1P54274 439 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 ABATP80404 500 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 ILF2Q12905 390 aaKnown RBP8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 GBX1Q14549 363 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 ZIC1Q15915 447 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 PRAMEF17Q5VTA0 474 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 ANKRD22Q5VYY1 191 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 PRMT9Q6P2P2 845 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 KIAA0408Q6ZU52 694 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 TTLL10Q6ZVT0 673 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 MICALCLQ6ZW33 695 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 CENPUQ71F23 418 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 MRGPREQ86SM8 312 aa8.72□□□□□ -1.01
SNORD88A-201ENST00000408314 TAX1BP1Q86VP1 789 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms