RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 NEFHP12036 1026 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 GFAPP14136 432 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 TSPAN8P19075 237 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 HIST1H2ADP20671 130 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 CYP2A7P20853 494 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 BGNP21810 368 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 GDF5P43026 501 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 RXRGP48443 463 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 SERPINB4P48594 390 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 HSPA7P48741 367 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 GUCY1A3Q02108 690 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 PLOD1Q02809 727 aaPredicted RBP8.1□□□□□ -1.11
GPC3-203ENST00000406757 TARDBPQ13148 414 aaKnown RBP eCLIP8.1□□□□□ -1.11
GPC3-203ENST00000406757 FASTKQ14296 549 aaKnown RBP8.1□□□□□ -1.11
GPC3-203ENST00000406757 PCLAFQ15004 111 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 TGFBIQ15582 683 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 PPP1R3AQ16821 1122 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 ZXDCQ2QGD7 858 aaPredicted RBP8.1□□□□□ -1.11
GPC3-203ENST00000406757 CCDC153Q494R4 210 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 CES4AQ5XG92 561 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 UNC5DQ6UXZ4 953 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 ZYG11AQ6WRX3 759 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 ZCCHC23Q6ZST2 131 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 KANSL1Q7Z3B3 1105 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 CCDC91Q7Z6B0 441 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 RASGRP3Q8IV61 690 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 NUDCD3Q8IVD9 361 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 TRIM48Q8IWZ4 208 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 FBXO39Q8N4B4 442 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 ARL14Q8N4G2 192 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 PTGR2Q8N8N7 351 aaPredicted RBP8.1□□□□□ -1.11
GPC3-203ENST00000406757 KYQ8NBH2 561 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 FAM76AQ8TAV0 307 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 MCOLN3Q8TDD5 553 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 SLC37A2Q8TED4 501 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 SAP25Q8TEE9 199 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 PYCR2Q96C36 320 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 NXPE2Q96DL1 559 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 HIST1H2AHQ96KK5 128 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 HIST1H2AJQ99878 128 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 H2AFJQ9BTM1 129 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 TRIT1Q9H3H1 467 aaKnown RBP8.1□□□□□ -1.11
GPC3-203ENST00000406757 ZNF395Q9H8N7 513 aaPredicted RBP8.1□□□□□ -1.11
GPC3-203ENST00000406757 ARL15Q9NXU5 204 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 NCKIPSDQ9NZQ3 722 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 OARD1Q9Y530 152 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 PCDHGA1Q9Y5H4 931 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 AK5Q9Y6K8 562 aa8.1□□□□□ -1.11
GPC3-203ENST00000406757 KNL1Q8NG31 2342 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 KLHL33A6NCF5 533 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 LMO7DNF2Z398 122 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 PPM1DO15297 605 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 TM9SF1O15321 606 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 SLC16A5O15375 505 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 TLX3O43711 291 aaPredicted RBP8.09□□□□□ -1.11
GPC3-203ENST00000406757 SMIM24O75264 130 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 VIPP01282 170 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 S100BP04271 92 aaPredicted RBP8.09□□□□□ -1.11
GPC3-203ENST00000406757 DHRS4L1P0CG22 281 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 TAC1P20366 129 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 ATP5F1P24539 256 aaPredicted RBP8.09□□□□□ -1.11
GPC3-203ENST00000406757 EEF1DP29692 281 aaKnown RBP8.09□□□□□ -1.11
GPC3-203ENST00000406757 MAPK9P45984 424 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 ACADVLP49748 655 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 KPNA2P52292 529 aaKnown RBP8.09□□□□□ -1.11
GPC3-203ENST00000406757 CDH13P55290 713 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 YBX1P67809 324 aaKnown RBP8.09□□□□□ -1.11
GPC3-203ENST00000406757 NAE1Q13564 534 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 GPR18Q14330 331 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 CHI3L2Q15782 390 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 SWT1Q5T5J6 900 aaKnown RBP8.09□□□□□ -1.11
GPC3-203ENST00000406757 HES3Q5TGS1 186 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 TTC23LQ6PF05 361 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 SUSD1Q6UWL2 747 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 WASH2PQ6VEQ5 465 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 ADAMTSL2Q86TH1 951 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 FAM20CQ8IXL6 584 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 TBC1D21Q8IYX1 336 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 SFRP1Q8N474 314 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 CCNYL1Q8N7R7 359 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 OR4E2Q8NGC2 313 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 OR52E1Q8NGJ3 308 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 OR9A1PQ8NGU1 263 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 OR5K2Q8NHB8 316 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 RHEBL1Q8TAI7 183 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 MAPK15Q8TD08 544 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 DYDC1Q8WWB3 177 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 ZNF775Q96BV0 537 aaPredicted RBP8.09□□□□□ -1.11
GPC3-203ENST00000406757 RHBDF1Q96CC6 855 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 MED8Q96G25 268 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 NSUN5Q96P11 429 aaKnown RBP8.09□□□□□ -1.11
GPC3-203ENST00000406757 UBL7Q96S82 380 aaPredicted RBP8.09□□□□□ -1.11
GPC3-203ENST00000406757 TMEM79Q9BSE2 394 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 TBC1D10AQ9BXI6 508 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 TRIM54Q9BYV2 358 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 SHCBP1LQ9BZQ2 653 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 WASH6PQ9NQA3 447 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 INTS9Q9NV88 658 aaKnown RBP8.09□□□□□ -1.11
GPC3-203ENST00000406757 WWOXQ9NZC7 414 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 NUDT4Q9NZJ9 180 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms