RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 HSD17B2P37059 387 aa20.39■□□□□ 0.85
TPM1-208ENST00000404484 LRP8Q14114 963 aa20.39■□□□□ 0.85
TPM1-208ENST00000404484 PTK2BQ14289 1009 aa20.39■□□□□ 0.85
TPM1-208ENST00000404484 SF3A2Q15428 464 aaKnown RBP20.39■□□□□ 0.85
TPM1-208ENST00000404484 GGTA1PQ4G0N0 100 aa20.39■□□□□ 0.85
TPM1-208ENST00000404484 RNF165Q6ZSG1 346 aa20.39■□□□□ 0.85
TPM1-208ENST00000404484 OR56A3Q8NH54 315 aa20.39■□□□□ 0.85
TPM1-208ENST00000404484 BIRC7Q96CA5 298 aa20.39■□□□□ 0.85
TPM1-208ENST00000404484 HSPA12BQ96MM6 686 aa20.39■□□□□ 0.85
TPM1-208ENST00000404484 TRIT1Q9H3H1 467 aaKnown RBP20.39■□□□□ 0.85
TPM1-208ENST00000404484 ACTR8Q9H981 624 aa20.39■□□□□ 0.85
TPM1-208ENST00000404484 RIC8BQ9NVN3 520 aa20.39■□□□□ 0.85
TPM1-208ENST00000404484 TIMM22Q9Y584 194 aa20.39■□□□□ 0.85
TPM1-208ENST00000404484 PI4KAP42356 2102 aa20.39■□□□□ 0.85
TPM1-208ENST00000404484 DCHS1Q96JQ0 3298 aa20.39■□□□□ 0.85
TPM1-208ENST00000404484 A0A1B0GTL3 188 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 ZNF839A8K0R7 811 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 UGDHO60701 494 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 CLCNKAP51800 687 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 NAE1Q13564 534 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 UBAP2LQ14157 1087 aaKnown RBP20.38■□□□□ 0.85
TPM1-208ENST00000404484 SPRED3Q2MJR0 410 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 CAPRIN2Q6IMN6 1127 aaKnown RBP20.38■□□□□ 0.85
TPM1-208ENST00000404484 CPSF7Q8N684 471 aaKnown RBP20.38■□□□□ 0.85
TPM1-208ENST00000404484 OR5K2Q8NHB8 316 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 PRR11Q96HE9 360 aaPredicted RBP20.38■□□□□ 0.85
TPM1-208ENST00000404484 CDK15Q96Q40 435 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 ATG10Q9H0Y0 220 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 MRPL40Q9NQ50 206 aaKnown RBP20.38■□□□□ 0.85
TPM1-208ENST00000404484 PILRBQ9UKJ0 227 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 SLC22A14Q9Y267 594 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 CA5BQ9Y2D0 317 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.38■□□□□ 0.85
TPM1-208ENST00000404484 RRP15Q9Y3B9 282 aaKnown RBP20.38■□□□□ 0.85
TPM1-208ENST00000404484 ST14Q9Y5Y6 855 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 KNL1Q8NG31 2342 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 CEP192Q8TEP8 1941 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 A0A1W2PPC4 97 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 PRR19A6NJB7 356 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 H0Y8X5 98 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 CBX6O95503 412 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 ESRRAP11474 423 aaPredicted RBP20.38■□□□□ 0.85
TPM1-208ENST00000404484 ARHGAP19Q14CB8 494 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 CCSMST1Q4G0I0 132 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 TCEAL6Q6IPX3 200 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 CAPN13Q6MZZ7 669 aaPredicted RBP20.38■□□□□ 0.85
TPM1-208ENST00000404484 PRR23CQ6ZRP0 262 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 Q6ZSR6 202 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 CHSY3Q70JA7 882 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 LARP4Q71RC2 724 aaKnown RBP eCLIP20.38■□□□□ 0.859e-10■□□□□ 8.2
TPM1-208ENST00000404484 THOC6Q86W42 341 aaKnown RBP20.38■□□□□ 0.85
TPM1-208ENST00000404484 SYT12Q8IV01 421 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 SYTL1Q8IYJ3 562 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 TBC1D21Q8IYX1 336 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 RAB42Q8N4Z0 105 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 PHC3Q8NDX5 983 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 SPDYE1Q8NFV5 336 aaPredicted RBP20.38■□□□□ 0.85
TPM1-208ENST00000404484 CADM4Q8NFZ8 388 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 OR1E3Q8WZA6 343 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 TCEAL3Q969E4 200 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 ARL8BQ9NVJ2 186 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 GPRC5BQ9NZH0 403 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 TAGLN3Q9UI15 199 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 LNPEPQ9UIQ6 1025 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 PSMD13Q9UNM6 376 aa20.38■□□□□ 0.85
TPM1-208ENST00000404484 PRR5-ARHGAP8B1AHC4 643 aa20.37■□□□□ 0.85
TPM1-208ENST00000404484 PATE3B3GLJ2 98 aa20.37■□□□□ 0.85
TPM1-208ENST00000404484 UBDO15205 165 aa20.37■□□□□ 0.85
TPM1-208ENST00000404484 KRT6AP02538 564 aa20.37■□□□□ 0.85
TPM1-208ENST00000404484 KRT6BP04259 564 aa20.37■□□□□ 0.85
TPM1-208ENST00000404484 CCND1P24385 295 aa20.37■□□□□ 0.85
TPM1-208ENST00000404484 MAOBP27338 520 aa20.37■□□□□ 0.85
TPM1-208ENST00000404484 PRDX6P30041 224 aa20.37■□□□□ 0.85
TPM1-208ENST00000404484 KRT6CP48668 564 aa20.37■□□□□ 0.85
TPM1-208ENST00000404484 MNAT1P51948 309 aa20.37■□□□□ 0.85
TPM1-208ENST00000404484 CORO7P57737 925 aa20.37■□□□□ 0.85
TPM1-208ENST00000404484 NCALDP61601 193 aa20.37■□□□□ 0.85
TPM1-208ENST00000404484 ACTN3Q08043 901 aaPredicted RBP20.37■□□□□ 0.85
TPM1-208ENST00000404484 ZXDCQ2QGD7 858 aaPredicted RBP20.37■□□□□ 0.85
TPM1-208ENST00000404484 PYCR2Q96C36 320 aa20.37■□□□□ 0.85
TPM1-208ENST00000404484 TUBGCP3Q96CW5 907 aa20.37■□□□□ 0.85
TPM1-208ENST00000404484 CMTM5Q96DZ9 223 aa20.37■□□□□ 0.85
TPM1-208ENST00000404484 MED8Q96G25 268 aa20.37■□□□□ 0.85
TPM1-208ENST00000404484 PDXPQ96GD0 296 aa20.37■□□□□ 0.85
TPM1-208ENST00000404484 TUBB1Q9H4B7 451 aa20.37■□□□□ 0.85
TPM1-208ENST00000404484 EBF2Q9HAK2 575 aa20.37■□□□□ 0.85
TPM1-208ENST00000404484 SPATA7Q9P0W8 599 aa20.37■□□□□ 0.85
TPM1-208ENST00000404484 KCNK6Q9Y257 313 aa20.37■□□□□ 0.85
TPM1-208ENST00000404484 BTRCQ9Y297 605 aa20.37■□□□□ 0.85
TPM1-208ENST00000404484 DNAH14Q0VDD8 3507 aa20.36■□□□□ 0.85
TPM1-208ENST00000404484 METTL12A8MUP2 240 aa20.36■□□□□ 0.85
TPM1-208ENST00000404484 CLGNO14967 610 aa20.36■□□□□ 0.85
TPM1-208ENST00000404484 DNAJC8O75937 253 aaPredicted RBP20.36■□□□□ 0.85
TPM1-208ENST00000404484 EZRP15311 586 aaKnown RBP20.36■□□□□ 0.85
TPM1-208ENST00000404484 LBPP18428 481 aa20.36■□□□□ 0.85
TPM1-208ENST00000404484 EPORP19235 508 aa20.36■□□□□ 0.85
TPM1-208ENST00000404484 PNLIPRP1P54315 467 aa20.36■□□□□ 0.85
TPM1-208ENST00000404484 SRP54P61011 504 aaKnown RBP20.36■□□□□ 0.85
TPM1-208ENST00000404484 PCDH1Q08174 1060 aa20.36■□□□□ 0.85
TPM1-208ENST00000404484 XKR7Q5GH72 579 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms