RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 OTX2P32243 289 aa14.76□□□□□ -0.05
TPM1-207ENST00000403994 CCNFP41002 786 aa14.76□□□□□ -0.05
TPM1-207ENST00000403994 CCL11P51671 97 aa14.76□□□□□ -0.05
TPM1-207ENST00000403994 FOXL2P58012 376 aa14.76□□□□□ -0.05
TPM1-207ENST00000403994 DCDP81605 110 aaKnown RBP14.76□□□□□ -0.05
TPM1-207ENST00000403994 SARNPP82979 210 aaKnown RBP14.76□□□□□ -0.05
TPM1-207ENST00000403994 CYP1B1Q16678 543 aa14.76□□□□□ -0.05
TPM1-207ENST00000403994 NKAIN1Q4KMZ8 207 aa14.76□□□□□ -0.05
TPM1-207ENST00000403994 ZNF470Q6ECI4 717 aa14.76□□□□□ -0.05
TPM1-207ENST00000403994 TTC23LQ6PF05 361 aa14.76□□□□□ -0.05
TPM1-207ENST00000403994 SDCCAG8Q86SQ7 713 aaPredicted RBP14.76□□□□□ -0.05
TPM1-207ENST00000403994 CILP2Q8IUL8 1156 aa14.76□□□□□ -0.05
TPM1-207ENST00000403994 TMEM102Q8N9M5 508 aaPredicted RBP14.76□□□□□ -0.05
TPM1-207ENST00000403994 HMGCLL1Q8TB92 370 aa14.76□□□□□ -0.05
TPM1-207ENST00000403994 DLG3Q92796 817 aa14.76□□□□□ -0.05
TPM1-207ENST00000403994 MAGOHBQ96A72 148 aaKnown RBP14.76□□□□□ -0.05
TPM1-207ENST00000403994 RAD51AP1Q96B01 352 aa14.76□□□□□ -0.05
TPM1-207ENST00000403994 SERPINB12Q96P63 405 aa14.76□□□□□ -0.05
TPM1-207ENST00000403994 TCF12Q99081 682 aa14.76□□□□□ -0.05
TPM1-207ENST00000403994 NDC1Q9BTX1 674 aa14.76□□□□□ -0.05
TPM1-207ENST00000403994 INTS7Q9NVH2 962 aaKnown RBP14.76□□□□□ -0.05
TPM1-207ENST00000403994 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.76□□□□□ -0.05
TPM1-207ENST00000403994 IFT80Q9P2H3 777 aaPredicted RBP14.76□□□□□ -0.05
TPM1-207ENST00000403994 NDOR1Q9UHB4 597 aa14.76□□□□□ -0.05
TPM1-207ENST00000403994 GPN3Q9UHW5 284 aaPredicted RBP14.76□□□□□ -0.05
TPM1-207ENST00000403994 PTRH2Q9Y3E5 179 aaKnown RBP14.76□□□□□ -0.05
TPM1-207ENST00000403994 SHANK1Q9Y566 2161 aa14.75□□□□□ -0.05
TPM1-207ENST00000403994 A0A1B0GX78 115 aa14.75□□□□□ -0.05
TPM1-207ENST00000403994 PFDN6O15212 129 aa14.75□□□□□ -0.05
TPM1-207ENST00000403994 PRICKLE3O43900 615 aaPredicted RBP14.75□□□□□ -0.05
TPM1-207ENST00000403994 NRP2O60462 931 aa14.75□□□□□ -0.05
TPM1-207ENST00000403994 FKBP9O95302 570 aa14.75□□□□□ -0.05
TPM1-207ENST00000403994 F7P08709 466 aaPredicted RBP14.75□□□□□ -0.05
TPM1-207ENST00000403994 MLNP12872 115 aa14.75□□□□□ -0.05
TPM1-207ENST00000403994 COILP38432 576 aaPredicted RBP14.75□□□□□ -0.05
TPM1-207ENST00000403994 FOLR3P41439 243 aa14.75□□□□□ -0.05
TPM1-207ENST00000403994 RRADP55042 308 aa14.75□□□□□ -0.05
TPM1-207ENST00000403994 MLLT10P55197 1068 aa14.75□□□□□ -0.05
TPM1-207ENST00000403994 SF1Q15637 639 aaKnown RBP14.75□□□□□ -0.05
TPM1-207ENST00000403994 MLIPQ5VWP3 458 aa14.75□□□□□ -0.05
TPM1-207ENST00000403994 MRPL14Q6P1L8 145 aaKnown RBP14.75□□□□□ -0.05
TPM1-207ENST00000403994 CCDC137Q6PK04 289 aaKnown RBP14.75□□□□□ -0.05
TPM1-207ENST00000403994 FIGLAQ6QHK4 219 aa14.75□□□□□ -0.05
TPM1-207ENST00000403994 CENPUQ71F23 418 aa14.75□□□□□ -0.05
TPM1-207ENST00000403994 MED25Q71SY5 747 aa14.75□□□□□ -0.05
TPM1-207ENST00000403994 MCATQ8IVS2 390 aaKnown RBP14.75□□□□□ -0.05
TPM1-207ENST00000403994 FDCSPQ8NFU4 85 aa14.75□□□□□ -0.05
TPM1-207ENST00000403994 OR2Y1Q8NGV0 311 aa14.75□□□□□ -0.05
TPM1-207ENST00000403994 ZNF669Q96BR6 464 aaPredicted RBP14.75□□□□□ -0.05
TPM1-207ENST00000403994 PBKQ96KB5 322 aa14.75□□□□□ -0.05
TPM1-207ENST00000403994 FOPNLQ96NB1 174 aa14.75□□□□□ -0.05
TPM1-207ENST00000403994 NUDT9Q9BW91 350 aa14.75□□□□□ -0.05
TPM1-207ENST00000403994 XAB2Q9HCS7 855 aaKnown RBP14.75□□□□□ -0.05
TPM1-207ENST00000403994 SPATA7Q9P0W8 599 aa14.75□□□□□ -0.05
TPM1-207ENST00000403994 CRYL1Q9Y2S2 319 aa14.75□□□□□ -0.05
TPM1-207ENST00000403994 NEU2Q9Y3R4 380 aa14.75□□□□□ -0.05
TPM1-207ENST00000403994 MRFAP1Q9Y605 127 aa14.75□□□□□ -0.05
TPM1-207ENST00000403994 SPTBN1Q01082 2364 aaKnown RBP14.74□□□□□ -0.05
TPM1-207ENST00000403994 HEATR5BQ9P2D3 2071 aa14.74□□□□□ -0.05
TPM1-207ENST00000403994 FAM237BA0A1B0GVD1 139 aa14.74□□□□□ -0.05
TPM1-207ENST00000403994 A0A1W2PPV9 198 aa14.74□□□□□ -0.05
TPM1-207ENST00000403994 ARHGEF33A8MVX0 844 aa14.74□□□□□ -0.05
TPM1-207ENST00000403994 GOLGA8MH3BSY2 632 aa14.74□□□□□ -0.05
TPM1-207ENST00000403994 ZNF185O15231 689 aa14.74□□□□□ -0.05
TPM1-207ENST00000403994 CTSVO60911 334 aa14.74□□□□□ -0.05
TPM1-207ENST00000403994 MATN4O95460 622 aa14.74□□□□□ -0.05
TPM1-207ENST00000403994 UMODP07911 640 aa14.74□□□□□ -0.05
TPM1-207ENST00000403994 MCM3P25205 808 aa14.74□□□□□ -0.05
TPM1-207ENST00000403994 GRIA3P42263 894 aa14.74□□□□□ -0.05
TPM1-207ENST00000403994 MAGEA3P43357 314 aa14.74□□□□□ -0.05
TPM1-207ENST00000403994 CD97P48960 835 aa14.74□□□□□ -0.05
TPM1-207ENST00000403994 DHX34Q14147 1143 aaKnown RBP14.74□□□□□ -0.05
TPM1-207ENST00000403994 NADK2Q4G0N4 442 aa14.74□□□□□ -0.05
TPM1-207ENST00000403994 ANKRD20A4Q4UJ75 823 aa14.74□□□□□ -0.05
TPM1-207ENST00000403994 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.74□□□□□ -0.05
TPM1-207ENST00000403994 NEPROQ6NW34 567 aa14.74□□□□□ -0.05
TPM1-207ENST00000403994 TTLL10Q6ZVT0 673 aa14.74□□□□□ -0.05
TPM1-207ENST00000403994 TMEM151BQ8IW70 566 aa14.74□□□□□ -0.05
TPM1-207ENST00000403994 AGGF1Q8N302 714 aaeCLIP14.74□□□□□ -0.05
TPM1-207ENST00000403994 RAB42Q8N4Z0 105 aa14.74□□□□□ -0.05
TPM1-207ENST00000403994 MCUQ8NE86 351 aa14.74□□□□□ -0.05
TPM1-207ENST00000403994 OR2L3Q8NG85 312 aa14.74□□□□□ -0.05
TPM1-207ENST00000403994 COG1Q8WTW3 980 aa14.74□□□□□ -0.05
TPM1-207ENST00000403994 FKBP10Q96AY3 582 aa14.74□□□□□ -0.05
TPM1-207ENST00000403994 ZNF285Q96NJ3 590 aa14.74□□□□□ -0.05
TPM1-207ENST00000403994 NAP1L3Q99457 506 aaPredicted RBP14.74□□□□□ -0.05
TPM1-207ENST00000403994 MIPEPQ99797 713 aa14.74□□□□□ -0.05
TPM1-207ENST00000403994 SELENOSQ9BQE4 189 aa14.74□□□□□ -0.05
TPM1-207ENST00000403994 ENAMQ9NRM1 1142 aa14.74□□□□□ -0.05
TPM1-207ENST00000403994 SLC22A11Q9NSA0 550 aa14.74□□□□□ -0.05
TPM1-207ENST00000403994 INTS10Q9NVR2 710 aaKnown RBP14.74□□□□□ -0.05
TPM1-207ENST00000403994 GPR83Q9NYM4 423 aa14.74□□□□□ -0.05
TPM1-207ENST00000403994 GALPQ9UBC7 116 aa14.74□□□□□ -0.05
TPM1-207ENST00000403994 VPS9D1Q9Y2B5 631 aa14.74□□□□□ -0.05
TPM1-207ENST00000403994 ZNF451Q9Y4E5 1061 aa14.74□□□□□ -0.05
TPM1-207ENST00000403994 PCDHGB7Q9Y5F8 929 aa14.74□□□□□ -0.05
TPM1-207ENST00000403994 KLK4Q9Y5K2 254 aa14.74□□□□□ -0.05
TPM1-207ENST00000403994 ZCWPW2A0A1B0GU75 182 aa14.73□□□□□ -0.05
TPM1-207ENST00000403994 CLEC18AA5D8T8 446 aa14.73□□□□□ -0.05
TPM1-207ENST00000403994 A6NL46 340 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms