RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 SLC30A4O14863 429 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 CHST10O43529 356 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 VBP1P61758 197 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 LYSMD3Q7Z3D4 306 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 TRPV1Q8NER1 839 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 SGIP1Q9BQI5 828 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 C8orf4Q9NR00 106 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 SLC22A14Q9Y267 594 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 SLIT1O75093 1534 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 DAPL1A0PJW8 107 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 PPIBP23284 216 aaKnown RBP13.48□□□□□ -0.25
VAPA-202ENST00000400000 MAP3K8P41279 467 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 GRIA1P42261 906 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 PRKCDQ05655 676 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 ARFRP1Q13795 201 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 SCARB2Q14108 478 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 SLC29A4Q7RTT9 530 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 HOPXQ9BPY8 73 aaPredicted RBP13.48□□□□□ -0.25
VAPA-202ENST00000400000 NDC1Q9BTX1 674 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 MGAT4AQ9UM21 535 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 FSCN2O14926 492 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 CFHP08603 1231 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 PSKH1P11801 424 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 VARSP26640 1264 aaKnown RBP13.47□□□□□ -0.25
VAPA-202ENST00000400000 SLC39A3Q9BRY0 314 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 UNC93B1Q9H1C4 597 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 PGRP06401 933 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 HOXB2P14652 356 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 GRK5P34947 590 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 LBX1P52954 281 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 HEPACAMQ14CZ8 416 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 ABHD13Q7L211 337 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 OR8H1Q8NGG4 311 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 C1orf216Q8TAB5 229 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 ABHD5Q8WTS1 349 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 SLC35A5Q9BS91 424 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 HERC2P3Q9BVR0 1158 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 MED28Q9H204 178 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 IL21RQ9HBE5 538 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 FRMPD1Q5SYB0 1578 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 C9J4A7 227 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 PLD2O14939 933 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 HLA-DQB2P05538 268 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 ABHD2P08910 425 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 ENPP2Q13822 863 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 LAPTM4AQ15012 233 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 NNATQ16517 81 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 TMEM126BQ8IUX1 230 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 OR8K3Q8NH51 312 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 MNTQ99583 582 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 ZNF226Q9NYT6 803 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 TCRBV7S3A2A0A539 114 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 TLX3O43711 291 aaPredicted RBP13.47□□□□□ -0.25
VAPA-202ENST00000400000 ZBTB48P10074 688 aaPredicted RBP13.47□□□□□ -0.25
VAPA-202ENST00000400000 BNIP1Q12981 228 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 PCBP1Q15365 356 aaKnown RBP eCLIP13.47□□□□□ -0.25
VAPA-202ENST00000400000 SLC10A6Q3KNW5 377 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 CHRDL2Q6WN34 429 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 ZNF101Q8IZC7 436 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 FSTL5Q8N475 847 aaPredicted RBP13.47□□□□□ -0.25
VAPA-202ENST00000400000 PLD4Q96BZ4 506 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 SLC25A51Q9H1U9 297 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 SLC2A6Q9UGQ3 507 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 TMEM233B4DJY2 109 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 WNT9AO14904 365 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 CLEC3AO75596 197 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 CSTF2P33240 577 aaKnown RBP eCLIP13.47□□□□□ -0.25
VAPA-202ENST00000400000 ARL2P36404 184 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 CCR8P51685 355 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 NR1H2P55055 460 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 APLFQ8IW19 511 aaPredicted RBP13.47□□□□□ -0.25
VAPA-202ENST00000400000 METTL8Q9H825 291 aaKnown RBP13.47□□□□□ -0.25
VAPA-202ENST00000400000 PRDM16Q9HAZ2 1276 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 A0A1W2PPL8 197 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 CCNKO75909 580 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 LCA5LO95447 670 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 GPD2P43304 727 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 KHKP50053 298 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 TAF1AQ15573 450 aaPredicted RBP13.47□□□□□ -0.25
VAPA-202ENST00000400000 OR4K17Q8NGC6 315 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 PHOSPHO1Q8TCT1 267 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 KLHL6Q8WZ60 621 aa13.47□□□□□ -0.25
VAPA-202ENST00000400000 TRIM43Q96BQ3 446 aaPredicted RBP13.47□□□□□ -0.25
VAPA-202ENST00000400000 GPATCH1Q9BRR8 931 aaKnown RBP13.47□□□□□ -0.25
VAPA-202ENST00000400000 ATRNL1Q5VV63 1379 aa13.46□□□□□ -0.25
VAPA-202ENST00000400000 TCRBV21S2A2A0A5A6 115 aa13.46□□□□□ -0.25
VAPA-202ENST00000400000 CHP2O43745 196 aa13.46□□□□□ -0.25
VAPA-202ENST00000400000 ADAM8P78325 824 aa13.46□□□□□ -0.25
VAPA-202ENST00000400000 OLFML1Q6UWY5 402 aa13.46□□□□□ -0.25
VAPA-202ENST00000400000 LBX2Q6XYB7 198 aa13.46□□□□□ -0.25
VAPA-202ENST00000400000 ASB12Q8WXK4 309 aa13.46□□□□□ -0.25
VAPA-202ENST00000400000 HAVCR1Q96D42 359 aa13.46□□□□□ -0.25
VAPA-202ENST00000400000 MSLNLQ96KJ4 702 aa13.46□□□□□ -0.25
VAPA-202ENST00000400000 MGME1Q9BQP7 344 aa13.46□□□□□ -0.25
VAPA-202ENST00000400000 MAZP56270 477 aaKnown RBP13.46□□□□□ -0.25
VAPA-202ENST00000400000 DAOAP59103 153 aa13.46□□□□□ -0.25
VAPA-202ENST00000400000 MLLT1Q03111 559 aaPredicted RBP13.46□□□□□ -0.25
VAPA-202ENST00000400000 SYVN1Q86TM6 617 aa13.46□□□□□ -0.25
VAPA-202ENST00000400000 OR8H3Q8N146 312 aa13.46□□□□□ -0.25
VAPA-202ENST00000400000 PIK3R3Q92569 461 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms