RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.22□□□□□ -1.09
CHD8-201ENST00000399982 RCCD1A6NED2 376 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 EI24O14681 340 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 MFSD11O43934 449 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 CRTAPO75718 401 aaPredicted RBP8.22□□□□□ -1.09
CHD8-201ENST00000399982 ZNF81P51508 661 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 RPA4Q13156 261 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 LAPTM5Q13571 262 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 MOB2Q70IA6 237 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 TERB2Q8NHR7 220 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 ZNF486Q96H40 463 aaPredicted RBP8.22□□□□□ -1.09
CHD8-201ENST00000399982 SNTG2Q9NY99 539 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 ZNF282Q9UDV7 671 aaPredicted RBP8.22□□□□□ -1.09
CHD8-201ENST00000399982 MSRAQ9UJ68 235 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 ASF1AQ9Y294 204 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 GOLGA4Q13439 2230 aaKnown RBP8.22□□□□□ -1.09
CHD8-201ENST00000399982 SPATA31A6Q5VVP1 1343 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 KLRC4O43908 158 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 HK1P19367 917 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 GPR158Q5T848 1215 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 RFWD3Q6PCD5 774 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 KLHL35Q6PF15 583 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 NCEH1Q6PIU2 408 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 SLC2A7Q6PXP3 512 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.22□□□□□ -1.09
CHD8-201ENST00000399982 SAMD14Q8IZD0 417 aaPredicted RBP8.22□□□□□ -1.09
CHD8-201ENST00000399982 RBFAQ8N0V3 343 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 GDPD1Q8N9F7 314 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 SIMC1Q8NDZ2 872 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 TWIST2Q8WVJ9 160 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 ELMO3Q96BJ8 720 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 TXN2Q99757 166 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 TULP4Q9NRJ4 1543 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 A0A0U1RQK1 487 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 OR7G2Q8NG99 324 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 ZFP3Q96NJ6 502 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 TBC1D17Q9HA65 648 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 TESMINQ9Y4I5 508 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 ANKRD34BA5PLL1 514 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 NELFEP18615 380 aaKnown RBP8.21□□□□□ -1.09
CHD8-201ENST00000399982 CSTF2P33240 577 aaKnown RBP eCLIP8.21□□□□□ -1.09
CHD8-201ENST00000399982 FMO1Q01740 532 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 TAGLNQ01995 201 aaKnown RBP8.21□□□□□ -1.09
CHD8-201ENST00000399982 SCIMPQ6UWF3 145 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 OR4C6Q8NH72 309 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 SEC14L3Q9UDX4 400 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 MAGI3Q5TCQ9 1506 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 CCL15-CCL14A0A0B4J2E2 113 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 ZNF726A6NNF4 738 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 KCNU1A8MYU2 1149 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 NT5C1B-RDH14C9J2C7 533 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 LRRN3E7EW58 273 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 FAM86B1E9PN63 330 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 EIF1AYO14602 144 aaKnown RBP8.21□□□□□ -1.09
CHD8-201ENST00000399982 FFAR2O15552 330 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 SGCEO43556 437 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 YBX3P16989 372 aaKnown RBP eCLIP8.21□□□□□ -1.093e-6■□□□□ 10.5
CHD8-201ENST00000399982 TSPAN8P19075 237 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 DLSTP36957 453 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 EIF1AXP47813 144 aaKnown RBP8.21□□□□□ -1.09
CHD8-201ENST00000399982 POLR2HP52434 150 aaKnown RBP8.21□□□□□ -1.09
CHD8-201ENST00000399982 NCS1P62166 190 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 RNF4P78317 190 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 CCL15Q16663 113 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 XKR4Q5GH76 650 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 FAM198BQ6UWH4 519 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 DENND1CQ8IV53 801 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 FBXO15Q8NCQ5 510 aaPredicted RBP8.21□□□□□ -1.09
CHD8-201ENST00000399982 OR10H4Q8NGA5 316 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 ALG3Q92685 438 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 FEM1AQ9BSK4 669 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 EIF5A2Q9GZV4 153 aaKnown RBP8.21□□□□□ -1.09
CHD8-201ENST00000399982 OR10A4Q9H209 315 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 LRRN3Q9H3W5 708 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 BRD7Q9NPI1 651 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 CDH10Q9Y6N8 788 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 CELF2O95319 508 aaKnown RBP8.21□□□□□ -1.09
CHD8-201ENST00000399982 FCER2P06734 321 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 FPR1P21462 350 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 ETV6P41212 452 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 NIPAL4Q0D2K0 466 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 SLC13A2Q13183 592 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 ARL13AQ5H913 290 aaPredicted RBP8.21□□□□□ -1.09
CHD8-201ENST00000399982 FAM171A1Q5VUB5 890 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 WDR53Q7Z5U6 358 aaPredicted RBP8.21□□□□□ -1.09
CHD8-201ENST00000399982 FBXO33Q7Z6M2 555 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 SCML4Q8N228 414 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 SCRN2Q96FV2 425 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 PSKH2Q96QS6 385 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 RGCCQ9H4X1 137 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 COL20A1Q9P218 1284 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 MRPS33Q9Y291 106 aaKnown RBP8.21□□□□□ -1.09
CHD8-201ENST00000399982 CLTCL1P53675 1640 aa8.21□□□□□ -1.09
CHD8-201ENST00000399982 ZNF705EA8MWA4 302 aaPredicted RBP8.21□□□□□ -1.1
CHD8-201ENST00000399982 F8VP50 259 aa8.21□□□□□ -1.1
CHD8-201ENST00000399982 SCO1O75880 301 aa8.21□□□□□ -1.1
CHD8-201ENST00000399982 ZNF182P17025 639 aaPredicted RBP8.21□□□□□ -1.1
CHD8-201ENST00000399982 CASRP41180 1078 aa8.21□□□□□ -1.1
CHD8-201ENST00000399982 MAP2K3P46734 347 aa8.21□□□□□ -1.1
CHD8-201ENST00000399982 GTF2BQ00403 316 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms