RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 PCBP2Q15366 365 aaKnown RBP eCLIP10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 FAM69BQ5VUD6 431 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 KIAA0895LQ68EN5 471 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 UNC5AQ6ZN44 842 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 ZCCHC23Q6ZST2 131 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 RAB43Q86YS6 212 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 HTRA1Q92743 480 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 HDAC2Q92769 488 aaKnown RBP10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 ECHDC3Q96DC8 303 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 MAU2Q9Y6X3 613 aa10.75□□□□□ -0.69
CACNA1C-216ENST00000399638 DPPA5A6NC42 116 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 SEC14L5O43304 696 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 CER1O95813 267 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 CCNFP41002 786 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 CCR8P51685 355 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 EPHA4P54764 986 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 SF3B4Q15427 424 aaKnown RBP eCLIP10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 GXYLT1Q4G148 440 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 PLEKHG4Q58EX7 1191 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 EEF1DP3Q658K8 133 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 FSTL5Q8N475 847 aaPredicted RBP10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 LRRC20Q8TCA0 184 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 ART4Q93070 314 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 APOLD1Q96LR9 279 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 HHIPQ96QV1 700 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 CCDC59Q9P031 241 aaKnown RBP10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 TLL2Q9Y6L7 1015 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 C3P01024 1663 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 ASTN2O75129 1339 aaPredicted RBP10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 TP53I11O14683 189 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 POLR2CP19387 275 aaPredicted RBP10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 TTKP33981 857 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 GATMP50440 423 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 WNT3AP56704 352 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 RPL26P61254 145 aaKnown RBP10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 USP46P62068 366 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 STK11Q15831 433 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 KIAA1211LQ6NV74 962 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 ZFP1Q6P2D0 407 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 ZNF627Q7L945 461 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 DPY19L4Q7Z388 723 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 EGFL6Q8IUX8 553 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 LRRC52Q8N7C0 313 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 TCEANCQ8N8B7 351 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 BRI3BPQ8WY22 251 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 PDCD1LG2Q9BQ51 273 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 RMI1Q9H9A7 625 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 TREM1Q9NP99 234 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 MKKSQ9NPJ1 570 aaPredicted RBP10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 RCCD1A6NED2 376 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 PLD2O14939 933 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 MID1O15344 667 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 CARD17Q5XLA6 110 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 LRRC55Q6ZSA7 311 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 SERPINA9Q86WD7 417 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 SNIP1Q8TAD8 396 aaKnown RBP10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 EBPLQ9BY08 206 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 ZNF700Q9H0M5 742 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 SSU72Q9NP77 194 aaKnown RBP10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 TRPV5Q9NQA5 729 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 SNTG1Q9NSN8 517 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 REV1Q9UBZ9 1251 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 GABRQQ9UN88 632 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 FAM170BA6NMN3 283 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 FARS2O95363 451 aaKnown RBP10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 PIGNO95427 931 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 TYRP14679 529 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 MATKP42679 507 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 ESCO2Q56NI9 601 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 SLC36A4Q6YBV0 504 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 IRF2BP1Q8IU81 584 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 DNAJB14Q8TBM8 379 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 TM9SF4Q92544 642 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 DMRTB1Q96MA1 342 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 ACTR10Q9NZ32 417 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 RARRES3Q9UL19 164 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 FAM208AQ9UK61 1670 aaKnown RBP10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 INSIG1O15503 277 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 ITGB1P05556 798 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 PTDSS1P48651 473 aaKnown RBP10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 PXNP49023 591 aaPredicted RBP10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 RRP1BQ14684 758 aaKnown RBP10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 MAD2L1BPQ15013 274 aaPredicted RBP10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 RFTN2Q52LD8 501 aaPredicted RBP10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 TXNDC8Q6A555 127 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 PNLDC1Q8NA58 520 aaKnown RBP10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 COX4I2Q96KJ9 171 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 YIPF4Q9BSR8 244 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 THAP1Q9NVV9 213 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 DNAJB4Q9UDY4 337 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 PIAS3Q9Y6X2 628 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 AURKAO14965 403 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 SUV39H1O43463 412 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 CSF2P04141 144 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 RIDAP52758 137 aaKnown RBP10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 EARS2Q5JPH6 523 aaKnown RBP10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 UBAP2Q5T6F2 1119 aaKnown RBP10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 CPT1BQ92523 772 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 UBXN10Q96LJ8 280 aa10.74□□□□□ -0.69
CACNA1C-216ENST00000399638 CPEB1Q9BZB8 566 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms