RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 CARD16Q5EG05 197 aa10.84□□□□□ -0.67
CACNA1C-215ENST00000399637 INTS6LQ5JSJ4 861 aaKnown RBP10.84□□□□□ -0.67
CACNA1C-215ENST00000399637 LDLRAP1Q5SW96 308 aa10.84□□□□□ -0.67
CACNA1C-215ENST00000399637 ZNF852Q6ZMS4 543 aa10.84□□□□□ -0.67
CACNA1C-215ENST00000399637 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.84□□□□□ -0.67
CACNA1C-215ENST00000399637 CRYBG2Q8N1P7 616 aa10.84□□□□□ -0.67
CACNA1C-215ENST00000399637 LPIN3Q9BQK8 851 aa10.84□□□□□ -0.67
CACNA1C-215ENST00000399637 FAM83DQ9H4H8 585 aa10.84□□□□□ -0.67
CACNA1C-215ENST00000399637 PDE7BQ9NP56 450 aa10.84□□□□□ -0.67
CACNA1C-215ENST00000399637 B4GALT7Q9UBV7 327 aa10.84□□□□□ -0.67
CACNA1C-215ENST00000399637 GTF2IRD1Q9UHL9 959 aa10.84□□□□□ -0.67
CACNA1C-215ENST00000399637 PCDHGB7Q9Y5F8 929 aa10.84□□□□□ -0.67
CACNA1C-215ENST00000399637 ACOT7O00154 380 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 TNFRSF10BO14763 440 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 DNAJA2O60884 412 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 CBFA2T3O75081 653 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 NME6O75414 186 aaPredicted RBP10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 ITIH1P19827 911 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 HSD11B1P28845 292 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 SLC5A3P53794 718 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 ELOCQ15369 112 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 OR52J3Q8NH60 311 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 ZNF570Q96NI8 536 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 IPPKQ9H8X2 491 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 TAS2R7Q9NYW3 318 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 RCOR3Q9P2K3 495 aaPredicted RBP10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 LOC100509620A0A075B734 347 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 TCRBV9S1A1TA0A576 114 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 STK16O75716 305 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 BPGMP07738 259 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 SRYQ05066 204 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 MRPL49Q13405 166 aaKnown RBP10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 SIM2Q14190 667 aaPredicted RBP10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 SMARCD3Q6STE5 483 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 ZNF527Q8NB42 609 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 NETO2Q8NC67 525 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 OR10H4Q8NGA5 316 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 BORCS8Q96FH0 119 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 INPP4AQ96PE3 977 aaPredicted RBP10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 GPR21Q99679 349 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 IFT27Q9BW83 186 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 RAB11FIP5Q9BXF6 653 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 OR2AG1Q9H205 316 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 TTYH1Q9H313 450 aaPredicted RBP10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 ACSS3Q9H6R3 686 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 RIMBP3CA6NJZ7 1639 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 RIMBP3BA6NNM3 1639 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 RIMBP3Q9UFD9 1639 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 ZNF41P51814 821 aaPredicted RBP10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 SVOPLQ8N434 492 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 SEC61A2Q9H9S3 476 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 COL5A2P05997 1499 aaPredicted RBP10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 PRAMEF33A0A0G2JMD5 474 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 ISPDA4D126 451 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 FAM155AB1AL88 458 aaPredicted RBP10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 CCRL2O00421 344 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 PRAMEF10O60809 474 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 PRAMEF1O95521 474 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 NDST3O95803 873 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 EOMESO95936 686 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 ALPIP09923 528 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 RHOQP17081 205 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 TPSB2P20231 275 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 PTX3P26022 381 aaPredicted RBP10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 CCNFP41002 786 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 ADAM8P78325 824 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 TPSAB1Q15661 275 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 ZNF792Q3KQV3 632 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 PGM2L1Q6PCE3 622 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 FSTL5Q8N475 847 aaPredicted RBP10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 KAT2AQ92830 837 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 WDR18Q9BV38 432 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 MKKSQ9NPJ1 570 aaPredicted RBP10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 ERVK-18Q9QC07 812 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 NENFQ9UMX5 172 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 BAIAP2Q9UQB8 552 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 REXO2Q9Y3B8 237 aaKnown RBP10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 H0Y8G0 127 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 AXIN1O15169 862 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 BCAS1O75363 584 aaPredicted RBP10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 NELFEP18615 380 aaKnown RBP10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 TAS2R40P59535 323 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 ITPRIPL2Q3MIP1 535 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 PNLDC1Q8NA58 520 aaKnown RBP10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 PDPRQ8NCN5 879 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 CNDP2Q96KP4 475 aaKnown RBP10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 ELAC1Q9H777 363 aaKnown RBP10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 EMC3Q9P0I2 261 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 CD207Q9UJ71 328 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 DGKBQ9Y6T7 804 aa10.83□□□□□ -0.68
CACNA1C-215ENST00000399637 ADAMDEC1O15204 470 aa10.82□□□□□ -0.68
CACNA1C-215ENST00000399637 NUAK1O60285 661 aa10.82□□□□□ -0.68
CACNA1C-215ENST00000399637 PEX10O60683 326 aa10.82□□□□□ -0.68
CACNA1C-215ENST00000399637 TPST2O60704 377 aa10.82□□□□□ -0.68
CACNA1C-215ENST00000399637 TULP3O75386 442 aa10.82□□□□□ -0.68
CACNA1C-215ENST00000399637 PGLSO95336 258 aa10.82□□□□□ -0.68
CACNA1C-215ENST00000399637 FHP07954 510 aa10.82□□□□□ -0.68
CACNA1C-215ENST00000399637 NR0B1P51843 470 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms