RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 TGFB1P01137 390 aa13.9□□□□□ -0.18
PCDHGA11-201ENST00000398587 HLA-DQA2P01906 255 aa13.9□□□□□ -0.18
PCDHGA11-201ENST00000398587 CD1DP15813 335 aa13.9□□□□□ -0.18
PCDHGA11-201ENST00000398587 ACTR1BP42025 376 aa13.9□□□□□ -0.18
PCDHGA11-201ENST00000398587 CCR10P46092 362 aa13.9□□□□□ -0.18
PCDHGA11-201ENST00000398587 ACTR1AP61163 376 aa13.9□□□□□ -0.18
PCDHGA11-201ENST00000398587 DAG1Q14118 895 aa13.9□□□□□ -0.18
PCDHGA11-201ENST00000398587 TTC29Q8NA56 475 aaPredicted RBP13.9□□□□□ -0.18
PCDHGA11-201ENST00000398587 KCNA7Q96RP8 456 aa13.9□□□□□ -0.18
PCDHGA11-201ENST00000398587 ZNF347Q96SE7 839 aa13.9□□□□□ -0.18
PCDHGA11-201ENST00000398587 CHURC1-FNTBB4DL54 471 aa13.9□□□□□ -0.18
PCDHGA11-201ENST00000398587 TRMUO75648 421 aaKnown RBP13.9□□□□□ -0.18
PCDHGA11-201ENST00000398587 FADS2O95864 444 aaKnown RBP13.9□□□□□ -0.18
PCDHGA11-201ENST00000398587 PGRP06401 933 aa13.9□□□□□ -0.18
PCDHGA11-201ENST00000398587 G6PDP11413 515 aa13.9□□□□□ -0.18
PCDHGA11-201ENST00000398587 LMAN2Q12907 356 aa13.9□□□□□ -0.18
PCDHGA11-201ENST00000398587 HKDC1Q2TB90 917 aa13.9□□□□□ -0.18
PCDHGA11-201ENST00000398587 KCTD21Q4G0X4 260 aa13.9□□□□□ -0.18
PCDHGA11-201ENST00000398587 KLHL12Q53G59 568 aa13.9□□□□□ -0.18
PCDHGA11-201ENST00000398587 TFGQ92734 400 aaPredicted RBP13.9□□□□□ -0.18
PCDHGA11-201ENST00000398587 RAD9AQ99638 391 aa13.9□□□□□ -0.18
PCDHGA11-201ENST00000398587 OLFM1Q99784 485 aa13.9□□□□□ -0.18
PCDHGA11-201ENST00000398587 TRMT61BQ9BVS5 477 aaKnown RBP13.9□□□□□ -0.18
PCDHGA11-201ENST00000398587 SMG9Q9H0W8 520 aaKnown RBP13.9□□□□□ -0.18
PCDHGA11-201ENST00000398587 CXorf21Q9HAI6 301 aa13.9□□□□□ -0.18
PCDHGA11-201ENST00000398587 MYH9P35579 1960 aaKnown RBP13.9□□□□□ -0.18
PCDHGA11-201ENST00000398587 MAST2Q6P0Q8 1798 aa13.9□□□□□ -0.18
PCDHGA11-201ENST00000398587 CCNB2O95067 398 aa13.9□□□□□ -0.18
PCDHGA11-201ENST00000398587 ITGB1P05556 798 aa13.9□□□□□ -0.18
PCDHGA11-201ENST00000398587 CSF2RAP15509 400 aa13.9□□□□□ -0.18
PCDHGA11-201ENST00000398587 MERTKQ12866 999 aa13.9□□□□□ -0.18
PCDHGA11-201ENST00000398587 SLC9A5Q14940 896 aa13.9□□□□□ -0.18
PCDHGA11-201ENST00000398587 TAB1Q15750 504 aa13.9□□□□□ -0.18
PCDHGA11-201ENST00000398587 SLC2A7Q6PXP3 512 aa13.9□□□□□ -0.18
PCDHGA11-201ENST00000398587 FAM220AQ7Z4H9 259 aa13.9□□□□□ -0.18
PCDHGA11-201ENST00000398587 SLC30A8Q8IWU4 369 aa13.9□□□□□ -0.18
PCDHGA11-201ENST00000398587 MPZL2O60487 215 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 NPPAP01160 153 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 C4BPBP20851 252 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 GKP32189 559 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 MAGEA6P43360 314 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 CREB5Q02930 508 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 SNAPC1Q16533 368 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 SPATS1Q496A3 300 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 PLEKHS1Q5SXH7 462 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 OR4F3Q6IEY1 312 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 NEK5Q6P3R8 708 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 SCD5Q86SK9 330 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 SPRTNQ9H040 489 aaPredicted RBP13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 LAMA4Q16363 1823 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 PIK3CBP42338 1070 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 CLCN4P51793 760 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 CLCNKAP51800 687 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 PDCD4Q53EL6 469 aaKnown RBP13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 DNASE1L2Q92874 299 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 SIPA1Q96FS4 1042 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 GAS2L1Q99501 681 aaPredicted RBP13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 CARS2Q9HA77 564 aaKnown RBP13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 ZCCHC3Q9NUD5 404 aaKnown RBP13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 MARCH4Q9P2E8 410 aaPredicted RBP13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 OAZ3Q9UMX2 235 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 ZCWPW2A0A1B0GU75 182 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 MMP20O60882 483 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 CD247P20963 164 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 YAP1P46937 504 aaKnown RBP13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 BLKP51451 505 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 ZNF846Q147U1 533 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 ZBTB46Q86UZ6 589 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 CEP97Q8IW35 865 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 MCFD2Q8NI22 146 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 NAT14Q8WUY8 206 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 LRIG1Q96JA1 1093 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 SPHK2Q9NRA0 654 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 C2orf78A6NCI8 922 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 TEX28O15482 410 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 HNF1BP35680 557 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 ARSDP51689 593 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 ABHD18Q0P651 414 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 LRRC32Q14392 662 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 KHDRBS2Q5VWX1 349 aaKnown RBP13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 DPY19L3Q6ZPD9 716 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 AHSA2Q719I0 299 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 ZNF248Q8NDW4 579 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 ZCCHC10Q8TBK6 192 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 CCDC106Q9BWC9 280 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 RSPH9Q9H1X1 276 aaPredicted RBP13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 ABCB10Q9NRK6 738 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 MAFFQ9ULX9 164 aa13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 NDRG2Q9UN36 371 aaKnown RBP13.89□□□□□ -0.19
PCDHGA11-201ENST00000398587 SAP18O00422 153 aaKnown RBP13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 OR1I1O60431 355 aa13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 GADD45GO95257 159 aa13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 ANXA8P13928 327 aa13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 SYN1P17600 705 aa13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 IL4RP24394 825 aa13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 MTTPP55157 894 aa13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 RAB33AQ14088 237 aa13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 CLLU1OSQ5K130 101 aa13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 C6orf136Q5SQH8 315 aa13.88□□□□□ -0.19
PCDHGA11-201ENST00000398587 PDE12Q6L8Q7 609 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms