RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 ITGALP20701 1170 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 PTPN3P26045 913 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 KCNJ5P48544 419 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 NOVA1P51513 510 aaKnown RBP3.69□□□□□ -1.82
UBE3A-202ENST00000397954 ARFIP1P53367 373 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 CDK3Q00526 305 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 CFHR1Q03591 330 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 SCARB2Q14108 478 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 FZD2Q14332 565 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 IRF4Q15306 451 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 RPS6KA1Q15418 735 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 CNGA3Q16281 694 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 SKIDA1Q1XH10 827 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 KIF19Q2TAC6 998 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 FAM72AQ5TYM5 149 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 KCTD11Q693B1 232 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 FAM72DQ6L9T8 149 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 SNX20Q7Z614 316 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 TFAP2DQ7Z6R9 452 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 LCA5Q86VQ0 697 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 FAM72BQ86X60 149 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 LRRC8AQ8IWT6 810 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 NPWQ8N729 165 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 WDR36Q8NI36 951 aaKnown RBP3.69□□□□□ -1.82
UBE3A-202ENST00000397954 PIWIL2Q8TC59 973 aaKnown RBP3.69□□□□□ -1.82
UBE3A-202ENST00000397954 HM13Q8TCT9 377 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 MAPK15Q8TD08 544 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 EDARADDQ8WWZ3 215 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 NDRG1Q92597 394 aaKnown RBP3.69□□□□□ -1.82
UBE3A-202ENST00000397954 HSPH1Q92598 858 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 AGAP3Q96P47 875 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 PANX3Q96QZ0 392 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 UBL7Q96S82 380 aaPredicted RBP3.69□□□□□ -1.82
UBE3A-202ENST00000397954 SEMA3CQ99985 751 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 CALN1Q9BXU9 219 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 POPDC3Q9HBV1 291 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 NLE1Q9NVX2 485 aaPredicted RBP3.69□□□□□ -1.82
UBE3A-202ENST00000397954 SEPT10Q9P0V9 454 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 DNAI1Q9UI46 699 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 SLCO3A1Q9UIG8 710 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 DUSP13Q9UII6 198 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 NUDT5Q9UKK9 219 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 DNAJC16Q9Y2G8 782 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 HYOU1Q9Y4L1 999 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 ASB1Q9Y576 335 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 CACNA1EQ15878 2313 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 C4orf47A7E2U8 309 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 SLC16A5O15375 505 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 PRPF4O43172 522 aaKnown RBP eCLIP3.69□□□□□ -1.822e-8■□□□□ 10.1
UBE3A-202ENST00000397954 DUX1O43812 170 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 NUAK1O60285 661 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 UGT2B4P06133 528 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 FTH1P19P0C7X4 201 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 IL11P20809 199 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 CHMP24386 653 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 ADRA1DP25100 572 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 HPDP32754 393 aaPredicted RBP3.69□□□□□ -1.82
UBE3A-202ENST00000397954 STK19P49842 368 aaPredicted RBP3.69□□□□□ -1.82
UBE3A-202ENST00000397954 BNC1Q01954 994 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 CACNG1Q06432 222 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 CKAP4Q07065 602 aaKnown RBP3.69□□□□□ -1.82
UBE3A-202ENST00000397954 CD69Q07108 199 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 SP140Q13342 867 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 EFR3AQ14156 821 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 IL11RAQ14626 422 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 MESDQ14696 234 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 ARHGAP19Q14CB8 494 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 TMED2Q15363 201 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 NKPD1Q17RQ9 610 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 UGT3A1Q6NUS8 523 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 SHQ1Q6PI26 577 aaKnown RBP3.69□□□□□ -1.82
UBE3A-202ENST00000397954 RANBP10Q6VN20 620 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 Q6ZSR6 202 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 SZRD1Q7Z422 152 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 PXKQ7Z7A4 578 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 SLC44A2Q8IWA5 706 aaPredicted RBP3.69□□□□□ -1.82
UBE3A-202ENST00000397954 KLHDC8AQ8IYD2 350 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 TMEFF1Q8IYR6 380 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 ARL14Q8N4G2 192 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 SLC15A4Q8N697 577 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 UBE2FQ969M7 185 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 SLC22A18Q96BI1 424 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 BTBD6Q96KE9 485 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 BMFQ96LC9 184 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 FOXB1Q99853 325 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 TBL1YQ9BQ87 522 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 FAM83DQ9H4H8 585 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 KIR3DX1Q9H7L2 352 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 CHODLQ9H9P2 273 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 FBXO8Q9NRD0 319 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 PLK2Q9NYY3 685 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 APOBEC3BQ9UH17 382 aaKnown RBP3.69□□□□□ -1.82
UBE3A-202ENST00000397954 PCYOX1Q9UHG3 505 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 MED16Q9Y2X0 877 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 SNX11Q9Y5W9 270 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 PSAT1Q9Y617 370 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 COLEC10Q9Y6Z7 277 aa3.69□□□□□ -1.82
UBE3A-202ENST00000397954 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.68□□□□□ -1.82
UBE3A-202ENST00000397954 H3BQF6 201 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms