RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 SCAMP1O15126 338 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 DENRO43583 198 aaKnown RBP18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 KCNJ13O60928 360 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 BCAS2O75934 225 aaPredicted RBP18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 CATP04040 527 aaKnown RBP18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 UBTFL6P0CB48 400 aaPredicted RBP18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 BCKDHBP21953 392 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 CALRP27797 417 aaKnown RBP18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 MAP4P27816 1152 aaKnown RBP18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 ERFP50548 548 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 CDKL1Q00532 357 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 FLOT2Q14254 428 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 PTK2BQ14289 1009 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 C18orf21Q32NC0 220 aaPredicted RBP18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 CDKL4Q5MAI5 379 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 RNF220Q5VTB9 566 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 LPCAT4Q643R3 524 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 ANKS6Q68DC2 871 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 SLC30A9Q6PML9 568 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 MBOAT1Q6ZNC8 495 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 ADCY4Q8NFM4 1077 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 RHBDF1Q96CC6 855 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 RCN3Q96D15 328 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 CENPKQ9BS16 269 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 WDR41Q9HAD4 459 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 MEAF6Q9HAF1 191 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 EIF2B4Q9UI10 523 aaKnown RBP18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 KCNK6Q9Y257 313 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 TNPO3Q9Y5L0 923 aaKnown RBP18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 COPG1Q9Y678 874 aaKnown RBP18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 SLCO1B1Q9Y6L6 691 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 CCDC163A0A0D9SF12 145 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 ARHGEF33A8MVX0 844 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 LAMTOR5O43504 91 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 THEGLP0DJG4 465 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 ACADLP28330 430 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 INHBCP55103 352 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 CDH13P55290 713 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 SRP54P61011 504 aaKnown RBP18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 STX5Q13190 355 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 MMEL1Q495T6 779 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 NXNQ6DKJ4 435 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 PDZD3Q86UT5 571 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 SLC22A18ASQ8N1D0 253 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 GALNT15Q8N3T1 639 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 SPDYE1Q8NFV5 336 aaPredicted RBP18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 FAM174AQ8TBP5 190 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 ZNF483Q8TF39 744 aaPredicted RBP18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 HSPA12BQ96MM6 686 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 NSUN5Q96P11 429 aaKnown RBP18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 CATSPER2Q96P56 530 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 C1QTNF3Q9BXJ4 246 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 OSGEPL1Q9H4B0 414 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 PRMT8Q9NR22 394 aaPredicted RBP18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 WWOXQ9NZC7 414 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 ACSL5Q9ULC5 683 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 RAB26Q9ULW5 256 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 DTNAQ9Y4J8 743 aa18.79■□□□□ 0.6
PDLIM2-204ENST00000397760 TAPBPO15533 448 aa18.78■□□□□ 0.6
PDLIM2-204ENST00000397760 RPS17P08708 135 aaKnown RBP18.78■□□□□ 0.6
PDLIM2-204ENST00000397760 MAOBP27338 520 aa18.78■□□□□ 0.6
PDLIM2-204ENST00000397760 BDKRB1P46663 353 aa18.78■□□□□ 0.6
PDLIM2-204ENST00000397760 HSPA13P48723 471 aa18.78■□□□□ 0.6
PDLIM2-204ENST00000397760 FNTBP49356 437 aa18.78■□□□□ 0.6
PDLIM2-204ENST00000397760 AQP4P55087 323 aa18.78■□□□□ 0.6
PDLIM2-204ENST00000397760 AP1S2P56377 157 aa18.78■□□□□ 0.6
PDLIM2-204ENST00000397760 SQLEQ14534 574 aa18.78■□□□□ 0.6
PDLIM2-204ENST00000397760 PCBP2Q15366 365 aaKnown RBP eCLIP18.78■□□□□ 0.69e-7■■■■□ 24.1
PDLIM2-204ENST00000397760 KLHDC7BQ96G42 594 aa18.78■□□□□ 0.6
PDLIM2-204ENST00000397760 ZDHHC5Q9C0B5 715 aa18.78■□□□□ 0.6
PDLIM2-204ENST00000397760 PAPOLBQ9NRJ5 636 aaKnown RBP18.78■□□□□ 0.6
PDLIM2-204ENST00000397760 NDUFA13Q9P0J0 144 aa18.78■□□□□ 0.6
PDLIM2-204ENST00000397760 PCTPQ9UKL6 214 aa18.78■□□□□ 0.6
PDLIM2-204ENST00000397760 PNMA8BQ9ULN7 279 aaPredicted RBP18.78■□□□□ 0.6
PDLIM2-204ENST00000397760 ASB1Q9Y576 335 aa18.78■□□□□ 0.6
PDLIM2-204ENST00000397760 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.77■□□□□ 0.6
PDLIM2-204ENST00000397760 C1orf105O95561 183 aa18.77■□□□□ 0.6
PDLIM2-204ENST00000397760 TSPAN8P19075 237 aa18.77■□□□□ 0.6
PDLIM2-204ENST00000397760 RPL10P27635 214 aaKnown RBP18.77■□□□□ 0.6
PDLIM2-204ENST00000397760 HSPA7P48741 367 aa18.77■□□□□ 0.6
PDLIM2-204ENST00000397760 SH3BGRP55822 239 aaPredicted RBP18.77■□□□□ 0.6
PDLIM2-204ENST00000397760 NAA20P61599 178 aa18.77■□□□□ 0.6
PDLIM2-204ENST00000397760 ROR2Q01974 943 aaKnown RBP18.77■□□□□ 0.6
PDLIM2-204ENST00000397760 PDCD2Q16342 344 aaPredicted RBP18.77■□□□□ 0.6
PDLIM2-204ENST00000397760 ALG11Q2TAA5 492 aa18.77■□□□□ 0.6
PDLIM2-204ENST00000397760 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.77■□□□□ 0.6
PDLIM2-204ENST00000397760 TMEFF1Q8IYR6 380 aa18.77■□□□□ 0.6
PDLIM2-204ENST00000397760 MARVELD2Q8N4S9 558 aa18.77■□□□□ 0.6
PDLIM2-204ENST00000397760 MRPL1Q9BYD6 325 aaKnown RBP18.77■□□□□ 0.6
PDLIM2-204ENST00000397760 GPR27Q9NS67 375 aa18.77■□□□□ 0.6
PDLIM2-204ENST00000397760 CNOT11Q9UKZ1 510 aaKnown RBP18.77■□□□□ 0.6
PDLIM2-204ENST00000397760 SPTY2D1-AS1A0A0U1RR47 76 aa18.77■□□□□ 0.59
PDLIM2-204ENST00000397760 KRT87PA6NCN2 255 aa18.77■□□□□ 0.59
PDLIM2-204ENST00000397760 IFRD1O00458 451 aaPredicted RBP18.77■□□□□ 0.59
PDLIM2-204ENST00000397760 TRIM38O00635 465 aa18.77■□□□□ 0.59
PDLIM2-204ENST00000397760 SLC35G4P0C7Q5 338 aa18.77■□□□□ 0.59
PDLIM2-204ENST00000397760 IDSP22304 550 aa18.77■□□□□ 0.59
PDLIM2-204ENST00000397760 PEX19P40855 299 aa18.77■□□□□ 0.59
PDLIM2-204ENST00000397760 ATP4BP51164 291 aa18.77■□□□□ 0.59
PDLIM2-204ENST00000397760 CLCNKAP51800 687 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms