RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 LPCAT1Q8NF37 534 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 ANKRD49Q8WVL7 239 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 SLC13A3Q8WWT9 602 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 JPH3Q8WXH2 748 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-205ENST00000397611 TRAF4Q9BUZ4 470 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-205ENST00000397611 SPATA9Q9BWV2 254 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 PLCL2Q9UPR0 1127 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 FAM50BQ9Y247 325 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 FAM172BPA6NC97 362 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 BEST1O76090 585 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 PRKACAP17612 351 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 NDUFV1P49821 464 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 VEZF1Q14119 521 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 HMBOX1Q6NT76 420 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 TBC1D15Q8TC07 691 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 PROKR1Q8TCW9 393 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 AP3S1Q92572 193 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 MSANTD3Q96H12 275 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 HHIPQ96QV1 700 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 GPR63Q9BZJ6 419 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 NLE1Q9NVX2 485 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-205ENST00000397611 ZNF451Q9Y4E5 1061 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 GLUD1P00367 558 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 S100A6P06703 90 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 USP17L7P0C7H9 530 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 STARP49675 285 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 BMXP51813 675 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 AP1S2P56377 157 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 SH3BP2P78314 561 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 FAM189BP81408 668 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 ELP6Q0PNE2 266 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 TAF1AQ15573 450 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-205ENST00000397611 UPP1Q16831 310 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 FBXO48Q5FWF7 155 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 PPP2R2DQ66LE6 453 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 FAM180AQ6UWF9 173 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 PTCHD4Q6ZW05 846 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 CHST9Q7L1S5 443 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 SNX29P2Q8IUI4 249 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 SYT12Q8IV01 421 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 TTC29Q8NA56 475 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-205ENST00000397611 CLHC1Q8NHS4 586 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 TMBIM1Q969X1 311 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 SEMA3CQ99985 751 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 MRPL9Q9BYD2 267 aaKnown RBP5.33□□□□□ -1.56
PTPRD-205ENST00000397611 GSDMCQ9BYG8 508 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 PLCXD1Q9NUJ7 323 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 KLQ9UEF7 1012 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 PCDHB5Q9Y5E4 795 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 HS3ST4Q9Y661 456 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 CHURC1-FNTBB4DL54 471 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 H3BMQ9 156 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 ANKRD28O15084 1053 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 OR7A10O76100 309 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 KDM4BO94953 1096 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 CHRM5P08912 532 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-205ENST00000397611 ALDOCP09972 364 aaKnown RBP5.33□□□□□ -1.56
PTPRD-205ENST00000397611 HOXD9P28356 352 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-205ENST00000397611 CTSKP43235 329 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 MAPK9P45984 424 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 KCNC1P48547 511 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 C21orf58P58505 322 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 GGTA1PQ4G0N0 100 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 ALFQ53S48 1182 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 SYT6Q5T7P8 510 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-205ENST00000397611 ZNF280DQ6N043 979 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 OTOP3Q7RTS5 596 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 MFSD6LQ8IWD5 586 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 TP53INP2Q8IXH6 220 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 ZNF557Q8N988 423 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-205ENST00000397611 ASB12Q8WXK4 309 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 COG8Q96MW5 612 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 IL17CQ9P0M4 197 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 TRPS1Q9UHF7 1281 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 CCL15-CCL14A0A0B4J2E2 113 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 MGAT4DA6NG13 374 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 WNT9AO14904 365 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 CNTN5O94779 1100 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 ZNF7P17097 686 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-205ENST00000397611 PRPH2P23942 346 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 ZNF140P52738 457 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-205ENST00000397611 SCRN3Q0VDG4 424 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 ELOAQ14241 798 aaKnown RBP5.33□□□□□ -1.56
PTPRD-205ENST00000397611 CCL15Q16663 113 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 NANOGP8Q6NSW7 305 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 RETSATQ6NUM9 610 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 CDC73Q6P1J9 531 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 GDPGP1Q6ZNW5 385 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 RASAL3Q86YV0 1011 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 ZNF671Q8TAW3 534 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 ZNF583Q96ND8 569 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 NANOGQ9H9S0 305 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 CATSPERZQ9NTU4 200 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 PTGFRNQ9P2B2 879 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 GJD2Q9UKL4 321 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 MED16Q9Y2X0 877 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 PCDHGA4Q9Y5G9 962 aa5.33□□□□□ -1.56
PTPRD-205ENST00000397611 TCRBV5S2A0A599 114 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 hCG_2039718K7EN88 272 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 DHFRP00374 187 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms