RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 PCP4L1A6NKN8 68 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 ATP6V1G2-DDX39BF2Z307 99 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 SH3BGRLO75368 114 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 B3GALNT1O75752 331 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 RPP40O75818 363 aaKnown RBP4.91□□□□□ -1.62
SSR1-202ENST00000397511 CYBBP04839 570 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 GPIP06744 558 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 CKBP12277 381 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 ALOX12P18054 663 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 LBPP18428 481 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 TACR2P21452 398 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 FDXRP22570 491 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 ALDH4A1P30038 563 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 LSM3P62310 102 aaKnown RBP4.91□□□□□ -1.62
SSR1-202ENST00000397511 IL1RL1Q01638 556 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 LIPEQ05469 1076 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 ZNF33AQ06730 810 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 PIGFQ07326 219 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 PTGR1Q14914 329 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 SETMARQ53H47 684 aaPredicted RBP4.91□□□□□ -1.62
SSR1-202ENST00000397511 COLEC12Q5KU26 742 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 AFMIDQ63HM1 303 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 ANKS6Q68DC2 871 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 TBPL2Q6SJ96 375 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 FAM151BQ6UXP7 276 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.91□□□□□ -1.62
SSR1-202ENST00000397511 MBOAT1Q6ZNC8 495 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 GDPD3Q7L5L3 318 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 MRPL10Q7Z7H8 261 aaKnown RBP4.91□□□□□ -1.62
SSR1-202ENST00000397511 NOXA1Q86UR1 476 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 P2RY8Q86VZ1 359 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 IFNL1Q8IU54 200 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 DCP1BQ8IZD4 617 aaKnown RBP4.91□□□□□ -1.62
SSR1-202ENST00000397511 METTL4Q8N3J2 472 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 TRPV3Q8NET8 790 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 STAG3L4Q8TBR4 150 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 METTL6Q8TCB7 284 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 SKA2Q8WVK7 121 aaPredicted RBP4.91□□□□□ -1.62
SSR1-202ENST00000397511 RORBQ92753 470 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 FUBP1Q96AE4 644 aaKnown RBP4.91□□□□□ -1.62
SSR1-202ENST00000397511 CEP19Q96LK0 163 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 MYRFLQ96LU7 910 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 ASB2Q96Q27 587 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 NODALQ96S42 347 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 ATOH8Q96SQ7 321 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 TM9SF2Q99805 663 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 BOCQ9BWV1 1114 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 REXO4Q9GZR2 422 aaKnown RBP4.91□□□□□ -1.62
SSR1-202ENST00000397511 CCDC90BQ9GZT6 254 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 FBXO44Q9H4M3 255 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 ARNT2Q9HBZ2 717 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 TM9SF3Q9HD45 589 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 ZC4H2Q9NQZ6 224 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 FARSBQ9NSD9 589 aaKnown RBP4.91□□□□□ -1.62
SSR1-202ENST00000397511 ACOXLQ9NUZ1 547 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 EXD2Q9NVH0 621 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 MAT2BQ9NZL9 334 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 TEKT2Q9UIF3 430 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 UTS2RQ9UKP6 389 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 SCML2Q9UQR0 700 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 FCF1Q9Y324 198 aaKnown RBP4.91□□□□□ -1.62
SSR1-202ENST00000397511 HCN4Q9Y3Q4 1203 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 GRIP1Q9Y3R0 1128 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 PMF1-BGLAPU3KQ54 211 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 A0A0G2JMP0 313 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 LINC00854A0A1B0GVQ3 168 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 ASPDHA6ND91 283 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 FXYD1O00168 92 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 MEN1O00255 615 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 PLK4O00444 970 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 BET1O15155 118 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 TBC1D4O60343 1298 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 NOBOXO60393 691 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 ZNF623O75123 536 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 SERPINI2O75830 405 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 INMTO95050 263 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 B3GALT4O96024 378 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 C1RP00736 705 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 LDLRP01130 860 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 G6PDP11413 515 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 CYBAP13498 195 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 HOXC8P31273 242 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 SHMT2P34897 504 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 CA5AP35218 305 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 GSK3BP49841 420 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 ST13P50502 369 aaKnown RBP4.91□□□□□ -1.62
SSR1-202ENST00000397511 HK3P52790 923 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 GP2P55259 537 aaKnown RBP4.91□□□□□ -1.62
SSR1-202ENST00000397511 OR4D2P58180 307 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 SRP54P61011 504 aaKnown RBP4.91□□□□□ -1.62
SSR1-202ENST00000397511 VBP1P61758 197 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 HMGCS1Q01581 520 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 ZNF45Q02386 682 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 IL10RBQ08334 325 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 LCP2Q13094 533 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 DSC3Q14574 896 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 LAPTM4AQ15012 233 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 TAF12Q16514 161 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 IMPG1Q17R60 797 aa4.91□□□□□ -1.62
SSR1-202ENST00000397511 TBRG1Q3YBR2 411 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms