RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 WISP2O76076 250 aa9.01□□□□□ -0.97
NEDD9-203ENST00000397378 HPP00738 406 aa9.01□□□□□ -0.97
NEDD9-203ENST00000397378 CHRM5P08912 532 aaPredicted RBP9.01□□□□□ -0.97
NEDD9-203ENST00000397378 GSTM1P09488 218 aa9.01□□□□□ -0.97
NEDD9-203ENST00000397378 H2AFZP0C0S5 128 aa9.01□□□□□ -0.97
NEDD9-203ENST00000397378 ALAS2P22557 587 aa9.01□□□□□ -0.97
NEDD9-203ENST00000397378 TMPRSS15P98073 1019 aa9.01□□□□□ -0.97
NEDD9-203ENST00000397378 PMP22Q01453 160 aa9.01□□□□□ -0.97
NEDD9-203ENST00000397378 GSTM4Q03013 218 aa9.01□□□□□ -0.97
NEDD9-203ENST00000397378 NFKBIBQ15653 356 aa9.01□□□□□ -0.97
NEDD9-203ENST00000397378 RBBP7Q16576 425 aa9.01□□□□□ -0.97
NEDD9-203ENST00000397378 YOD1Q5VVQ6 348 aaPredicted RBP9.01□□□□□ -0.97
NEDD9-203ENST00000397378 C3P1Q6ZMU1 363 aa9.01□□□□□ -0.97
NEDD9-203ENST00000397378 TTLL10Q6ZVT0 673 aa9.01□□□□□ -0.97
NEDD9-203ENST00000397378 H2AFVQ71UI9 128 aa9.01□□□□□ -0.97
NEDD9-203ENST00000397378 COX15Q7KZN9 410 aa9.01□□□□□ -0.97
NEDD9-203ENST00000397378 RFX6Q8HWS3 928 aa9.01□□□□□ -0.97
NEDD9-203ENST00000397378 DMRTC2Q8IXT2 367 aaPredicted RBP9.01□□□□□ -0.97
NEDD9-203ENST00000397378 INTS1Q8N201 2190 aaKnown RBP9.01□□□□□ -0.97
NEDD9-203ENST00000397378 IPMKQ8NFU5 416 aa9.01□□□□□ -0.97
NEDD9-203ENST00000397378 SUN3Q8TAQ9 357 aa9.01□□□□□ -0.97
NEDD9-203ENST00000397378 AGAP11Q8TF27 550 aa9.01□□□□□ -0.97
NEDD9-203ENST00000397378 PHF10Q8WUB8 498 aaKnown RBP9.01□□□□□ -0.97
NEDD9-203ENST00000397378 HAS2Q92819 552 aa9.01□□□□□ -0.97
NEDD9-203ENST00000397378 RMND5BQ96G75 393 aaPredicted RBP9.01□□□□□ -0.97
NEDD9-203ENST00000397378 NAP1L5Q96NT1 182 aaPredicted RBP9.01□□□□□ -0.97
NEDD9-203ENST00000397378 COPS8Q99627 209 aa9.01□□□□□ -0.97
NEDD9-203ENST00000397378 FSD1LQ9BXM9 530 aa9.01□□□□□ -0.97
NEDD9-203ENST00000397378 POLDIP3Q9BY77 421 aaKnown RBP9.01□□□□□ -0.97
NEDD9-203ENST00000397378 NPDC1Q9NQX5 325 aaPredicted RBP9.01□□□□□ -0.97
NEDD9-203ENST00000397378 ENAMQ9NRM1 1142 aa9.01□□□□□ -0.97
NEDD9-203ENST00000397378 IRAK4Q9NWZ3 460 aa9.01□□□□□ -0.97
NEDD9-203ENST00000397378 SPHK1Q9NYA1 384 aa9.01□□□□□ -0.97
NEDD9-203ENST00000397378 EURLQ9NYK6 297 aa9.01□□□□□ -0.97
NEDD9-203ENST00000397378 PTGFRNQ9P2B2 879 aa9.01□□□□□ -0.97
NEDD9-203ENST00000397378 CRLS1Q9UJA2 301 aa9.01□□□□□ -0.97
NEDD9-203ENST00000397378 NKX2-6A6NCS4 301 aa9□□□□□ -0.97
NEDD9-203ENST00000397378 VSTM2BA6NLU5 285 aa9□□□□□ -0.97
NEDD9-203ENST00000397378 FAM90A27PA6NNH2 459 aa9□□□□□ -0.97
NEDD9-203ENST00000397378 RNF212BA8MTL3 300 aa9□□□□□ -0.97
NEDD9-203ENST00000397378 DSCR3O14972 297 aa9□□□□□ -0.97
NEDD9-203ENST00000397378 PROM1O43490 865 aa9□□□□□ -0.97
NEDD9-203ENST00000397378 USP1O94782 785 aa9□□□□□ -0.97
NEDD9-203ENST00000397378 LY6G6DO95868 133 aa9□□□□□ -0.97
NEDD9-203ENST00000397378 ABOP16442 354 aa9□□□□□ -0.97
NEDD9-203ENST00000397378 ITGALP20701 1170 aa9□□□□□ -0.97
NEDD9-203ENST00000397378 FDXRP22570 491 aa9□□□□□ -0.97
NEDD9-203ENST00000397378 ACADLP28330 430 aa9□□□□□ -0.97
NEDD9-203ENST00000397378 SOX11P35716 441 aa9□□□□□ -0.97
NEDD9-203ENST00000397378 DYNLT1P63172 113 aa9□□□□□ -0.97
NEDD9-203ENST00000397378 YBX1P67809 324 aaKnown RBP9□□□□□ -0.97
NEDD9-203ENST00000397378 PPP2R2BQ00005 443 aa9□□□□□ -0.97
NEDD9-203ENST00000397378 FANCCQ00597 558 aa9□□□□□ -0.97
NEDD9-203ENST00000397378 KIR2DS3Q14952 304 aa9□□□□□ -0.97
NEDD9-203ENST00000397378 NR1I3Q14994 352 aa9□□□□□ -0.97
NEDD9-203ENST00000397378 GPR33Q49SQ1 333 aa9□□□□□ -0.97
NEDD9-203ENST00000397378 LRRC38Q5VT99 294 aa9□□□□□ -0.97
NEDD9-203ENST00000397378 Q6ZPB1 254 aaPredicted RBP9□□□□□ -0.97
NEDD9-203ENST00000397378 CLEC17AQ6ZS10 378 aa9□□□□□ -0.97
NEDD9-203ENST00000397378 PID1Q7Z2X4 250 aa9□□□□□ -0.97
NEDD9-203ENST00000397378 SNX20Q7Z614 316 aa9□□□□□ -0.97
NEDD9-203ENST00000397378 TBC1D21Q8IYX1 336 aa9□□□□□ -0.97
NEDD9-203ENST00000397378 ZNF567Q8N184 647 aa9□□□□□ -0.97
NEDD9-203ENST00000397378 ACRBPQ8NEB7 543 aa9□□□□□ -0.97
NEDD9-203ENST00000397378 OR5AR1Q8NGP9 310 aa9□□□□□ -0.97
NEDD9-203ENST00000397378 CCDC110Q8TBZ0 833 aa9□□□□□ -0.97
NEDD9-203ENST00000397378 CTNNBL1Q8WYA6 563 aaPredicted RBP9□□□□□ -0.97
NEDD9-203ENST00000397378 BPIFA3Q9BQP9 254 aa9□□□□□ -0.97
NEDD9-203ENST00000397378 ZNF395Q9H8N7 513 aaPredicted RBP9□□□□□ -0.97
NEDD9-203ENST00000397378 ZDHHC3Q9NYG2 299 aa9□□□□□ -0.97
NEDD9-203ENST00000397378 STMN3Q9NZ72 180 aa9□□□□□ -0.97
NEDD9-203ENST00000397378 IL1RAPL1Q9NZN1 696 aa9□□□□□ -0.97
NEDD9-203ENST00000397378 KLHL8Q9P2G9 620 aaPredicted RBP9□□□□□ -0.97
NEDD9-203ENST00000397378 POLG2Q9UHN1 485 aa9□□□□□ -0.97
NEDD9-203ENST00000397378 ZNF835Q9Y2P0 537 aa9□□□□□ -0.97
NEDD9-203ENST00000397378 TRBV5-4A0A0C4DH59 114 aa8.99□□□□□ -0.97
NEDD9-203ENST00000397378 SMTNL1A8MU46 457 aa8.99□□□□□ -0.97
NEDD9-203ENST00000397378 ISM1B1AKI9 464 aa8.99□□□□□ -0.97
NEDD9-203ENST00000397378 LIN7AO14910 233 aaPredicted RBP8.99□□□□□ -0.97
NEDD9-203ENST00000397378 MLYCDO95822 493 aa8.99□□□□□ -0.97
NEDD9-203ENST00000397378 AGTP01019 485 aa8.99□□□□□ -0.97
NEDD9-203ENST00000397378 KRT1P04264 644 aa8.99□□□□□ -0.97
NEDD9-203ENST00000397378 TPBGLP0DKB5 382 aa8.99□□□□□ -0.97
NEDD9-203ENST00000397378 PEBP1P30086 187 aaKnown RBP8.99□□□□□ -0.97
NEDD9-203ENST00000397378 CARSP49589 748 aaKnown RBP8.99□□□□□ -0.97
NEDD9-203ENST00000397378 GEMP55040 296 aa8.99□□□□□ -0.97
NEDD9-203ENST00000397378 ZBED6P86452 979 aa8.99□□□□□ -0.97
NEDD9-203ENST00000397378 MSLNQ13421 630 aaPredicted RBP8.99□□□□□ -0.97
NEDD9-203ENST00000397378 TFDP2Q14188 446 aa8.99□□□□□ -0.97
NEDD9-203ENST00000397378 MESDQ14696 234 aa8.99□□□□□ -0.97
NEDD9-203ENST00000397378 GRM7Q14831 915 aa8.99□□□□□ -0.97
NEDD9-203ENST00000397378 TAZQ16635 292 aa8.99□□□□□ -0.97
NEDD9-203ENST00000397378 TCTE1Q5JU00 501 aa8.99□□□□□ -0.97
NEDD9-203ENST00000397378 ATG9BQ674R7 924 aa8.99□□□□□ -0.97
NEDD9-203ENST00000397378 RANBP10Q6VN20 620 aa8.99□□□□□ -0.97
NEDD9-203ENST00000397378 SHISA6Q6ZSJ9 500 aa8.99□□□□□ -0.97
NEDD9-203ENST00000397378 MCATQ8IVS2 390 aaKnown RBP8.99□□□□□ -0.97
NEDD9-203ENST00000397378 FAM20CQ8IXL6 584 aa8.99□□□□□ -0.97
NEDD9-203ENST00000397378 KBTBD2Q8IY47 623 aa8.99□□□□□ -0.97
NEDD9-203ENST00000397378 EID3Q8N140 333 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms