RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 SDCCAG8Q86SQ7 713 aaPredicted RBP10.02□□□□□ -0.81
NEDD8-202ENST00000396828 SLC26A11Q86WA9 606 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 CFAP206Q8IYR0 622 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 RIBC1Q8N443 379 aaPredicted RBP10.02□□□□□ -0.81
NEDD8-202ENST00000396828 OTUD6BQ8N6M0 293 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 OR4E2Q8NGC2 313 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 OR13C4Q8NGS5 318 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 OR13J1Q8NGT2 312 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 OR2L2Q8NH16 312 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 EPS8L3Q8TE67 593 aaKnown RBP10.02□□□□□ -0.81
NEDD8-202ENST00000396828 MR1Q95460 341 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 HDAC10Q969S8 669 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 CDKN2AIPNLQ96HQ2 116 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 DNAJC1Q96KC8 554 aaKnown RBP10.02□□□□□ -0.81
NEDD8-202ENST00000396828 PAFAH2Q99487 392 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 CHST8Q9H2A9 424 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 CENPHQ9H3R5 247 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 ASB8Q9H765 288 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 PLAC1Q9HBJ0 212 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 IARS2Q9NSE4 1012 aaKnown RBP10.02□□□□□ -0.81
NEDD8-202ENST00000396828 SMOXQ9NWM0 555 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 PSMC3IPQ9P2W1 217 aaPredicted RBP10.02□□□□□ -0.81
NEDD8-202ENST00000396828 DNMT3AQ9Y6K1 912 aaPredicted RBP10.02□□□□□ -0.81
NEDD8-202ENST00000396828 SHANK1Q9Y566 2161 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 LRBAP50851 2863 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 SPTBN1Q01082 2364 aaKnown RBP10.01□□□□□ -0.81
NEDD8-202ENST00000396828 IQANK1A0A1B0GTG1 560 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 UBA6A0AVT1 1052 aaPredicted RBP10.01□□□□□ -0.81
NEDD8-202ENST00000396828 SLC9B1P1A6NJY1 282 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 C21orf140B9A014 251 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 H7C0S8 307 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 BTN3A3O00478 584 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 PFDN6O15212 129 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 RGS16O15492 202 aaPredicted RBP10.01□□□□□ -0.81
NEDD8-202ENST00000396828 SRP72O76094 671 aaKnown RBP10.01□□□□□ -0.81
NEDD8-202ENST00000396828 RECKO95980 971 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 MT-ND3P03897 115 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 CAPN1P07384 714 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 GP1BBP13224 206 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 MSH3P20585 1137 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 GNLYP22749 145 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 SLCO1A2P46721 670 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 SERPINB9P50453 376 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 CCL11P51671 97 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 ACY1Q03154 408 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 ILF2Q12905 390 aaKnown RBP10.01□□□□□ -0.81
NEDD8-202ENST00000396828 ITGA9Q13797 1035 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 EFTUD2Q15029 972 aaKnown RBP eCLIP10.01□□□□□ -0.811e-8■■■□□ 18.3
NEDD8-202ENST00000396828 RASA2Q15283 850 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 FASTKD1Q53R41 847 aaKnown RBP10.01□□□□□ -0.81
NEDD8-202ENST00000396828 PRR30Q53SZ7 412 aaPredicted RBP10.01□□□□□ -0.81
NEDD8-202ENST00000396828 ZNF789Q5FWF6 425 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 AARS2Q5JTZ9 985 aaKnown RBP10.01□□□□□ -0.81
NEDD8-202ENST00000396828 PLEKHS1Q5SXH7 462 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 MRNIPQ6NTE8 343 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 NEPROQ6NW34 567 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 AFTPHQ6ULP2 937 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 TDRPQ86YL5 185 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 TMEM151BQ8IW70 566 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 FAM26EQ8N5C1 309 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 OR4L1Q8NH43 312 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 OR1L3Q8NH93 324 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 ADAMTS17Q8TE56 1095 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 SLC44A1Q8WWI5 657 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.01□□□□□ -0.81
NEDD8-202ENST00000396828 MRRFQ96E11 262 aaKnown RBP10.01□□□□□ -0.81
NEDD8-202ENST00000396828 SGSM3Q96HU1 749 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 FCRL4Q96PJ5 515 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 TTC1Q99614 292 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 CPNE1Q99829 537 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 ZCCHC2Q9C0B9 1178 aaKnown RBP10.01□□□□□ -0.81
NEDD8-202ENST00000396828 KLHL25Q9H0H3 589 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 KIR3DX1Q9H7L2 352 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 MLXIPLQ9NP71 852 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 MED4Q9NPJ6 270 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 ZNF180Q9UJW8 692 aa10.01□□□□□ -0.81
NEDD8-202ENST00000396828 FARSAQ9Y285 508 aaKnown RBP10.01□□□□□ -0.81
NEDD8-202ENST00000396828 FER1L5A0AVI2 2057 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 CCDC162PA2VCL2 907 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 AGAP14A8MT82 685 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 CXorf49A8MYA2 514 aaPredicted RBP10□□□□□ -0.81
NEDD8-202ENST00000396828 GOLGA8KD6RF30 607 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 GOLGA8TH3BQL2 631 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 AGPSO00116 658 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 CD3EAPO15446 510 aaKnown RBP10□□□□□ -0.81
NEDD8-202ENST00000396828 HCRTR1O43613 425 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 CPNE3O75131 537 aaKnown RBP10□□□□□ -0.81
NEDD8-202ENST00000396828 KRT38O76015 456 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 ZBTB11O95625 1053 aaPredicted RBP10□□□□□ -0.81
NEDD8-202ENST00000396828 GOT2P00505 430 aaKnown RBP10□□□□□ -0.81
NEDD8-202ENST00000396828 PVRP15151 417 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 OGNP20774 298 aaKnown RBP10□□□□□ -0.81
NEDD8-202ENST00000396828 PSMA3P25788 255 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 CNTFP26441 200 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 ARNTP27540 789 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 PDHA2P29803 388 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 MC4RP32245 332 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 RORAP35398 523 aa10□□□□□ -0.81
NEDD8-202ENST00000396828 PPARGP37231 505 aaPredicted RBP10□□□□□ -0.81
NEDD8-202ENST00000396828 ARL4DP49703 201 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms