RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 PEX10O60683 326 aa15.29■□□□□ 0.04
GNE-202ENST00000396594 SH3BGRLO75368 114 aa15.29■□□□□ 0.04
GNE-202ENST00000396594 SNAI1O95863 264 aaPredicted RBP15.29■□□□□ 0.04
GNE-202ENST00000396594 IFNA6P05013 189 aa15.29■□□□□ 0.04
GNE-202ENST00000396594 SLC34A3Q8N130 599 aa15.29■□□□□ 0.04
GNE-202ENST00000396594 UFD1Q92890 307 aa15.29■□□□□ 0.04
GNE-202ENST00000396594 PITHD1Q9GZP4 211 aaPredicted RBP15.29■□□□□ 0.04
GNE-202ENST00000396594 PTPRHQ9HD43 1115 aa15.29■□□□□ 0.04
GNE-202ENST00000396594 IFT52Q9Y366 437 aa15.29■□□□□ 0.04
GNE-202ENST00000396594 DGKBQ9Y6T7 804 aa15.29■□□□□ 0.04
GNE-202ENST00000396594 H3BUI4 141 aa15.29■□□□□ 0.04
GNE-202ENST00000396594 ADGRE1Q14246 886 aa15.29■□□□□ 0.04
GNE-202ENST00000396594 ZC3HC1Q86WB0 502 aaKnown RBP15.29■□□□□ 0.04
GNE-202ENST00000396594 ZDHHC21Q8IVQ6 265 aa15.29■□□□□ 0.04
GNE-202ENST00000396594 OR9A1PQ8NGU1 263 aa15.29■□□□□ 0.04
GNE-202ENST00000396594 RAB2BQ8WUD1 216 aa15.29■□□□□ 0.04
GNE-202ENST00000396594 ATP6AP2A0A1C7CYW4 349 aa15.29■□□□□ 0.04
GNE-202ENST00000396594 A0A1W2PRU2 124 aa15.29■□□□□ 0.04
GNE-202ENST00000396594 ATP6AP2O75787 350 aa15.29■□□□□ 0.04
GNE-202ENST00000396594 ACTR1AP61163 376 aa15.29■□□□□ 0.04
GNE-202ENST00000396594 KCNJ2P63252 427 aa15.29■□□□□ 0.04
GNE-202ENST00000396594 ARSIQ5FYB1 569 aa15.29■□□□□ 0.04
GNE-202ENST00000396594 PITRM1Q5JRX3 1037 aa15.29■□□□□ 0.04
GNE-202ENST00000396594 RBM12BQ8IXT5 1001 aaKnown RBP15.29■□□□□ 0.04
GNE-202ENST00000396594 RNF31Q96EP0 1072 aa15.29■□□□□ 0.04
GNE-202ENST00000396594 PGAP3Q96FM1 320 aaPredicted RBP15.29■□□□□ 0.04
GNE-202ENST00000396594 LRRC46Q96FV0 321 aa15.29■□□□□ 0.04
GNE-202ENST00000396594 RIOK2Q9BVS4 552 aaKnown RBP15.29■□□□□ 0.04
GNE-202ENST00000396594 PTBP2Q9UKA9 531 aaKnown RBP15.29■□□□□ 0.04
GNE-202ENST00000396594 MT-CYBP00156 380 aaPredicted RBP15.28■□□□□ 0.04
GNE-202ENST00000396594 CD63P08962 238 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 RALGDSQ12967 914 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 SCARB2Q14108 478 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 ZNF805Q5CZA5 627 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 UNC5DQ6UXZ4 953 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 BBS10Q8TAM1 723 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 SLC5A11Q8WWX8 675 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 CLIP3Q96DZ5 547 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 TEX264Q9Y6I9 313 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 RNF225M0QZC1 329 aaPredicted RBP15.28■□□□□ 0.04
GNE-202ENST00000396594 LEFTY2O00292 366 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 TNFRSF10BO14763 440 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 KLK3P07288 261 aaPredicted RBP15.28■□□□□ 0.04
GNE-202ENST00000396594 C8BP07358 591 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 GSTT1P30711 240 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 CCNHP51946 323 aaPredicted RBP15.28■□□□□ 0.04
GNE-202ENST00000396594 MED22Q15528 200 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 LRIF1Q5T3J3 769 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 KLHDC10Q6PID8 442 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 SCIMPQ6UWF3 145 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 BNIPLQ7Z465 357 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 KLHL6Q8WZ60 621 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 PPM1MQ96MI6 270 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 ATG10Q9H0Y0 220 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 WDR55Q9H6Y2 383 aaPredicted RBP15.28■□□□□ 0.04
GNE-202ENST00000396594 CARS2Q9HA77 564 aaKnown RBP15.28■□□□□ 0.04
GNE-202ENST00000396594 ADAMTS5Q9UNA0 930 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 SLBPQ14493 270 aaKnown RBP eCLIP15.28■□□□□ 0.04
GNE-202ENST00000396594 COQ5Q5HYK3 327 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 ZNF440Q8IYI8 595 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 OR4C15Q8NGM1 316 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 MCFD2Q8NI22 146 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 PHOSPHO2Q8TCD6 241 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 ZNF382Q96SR6 550 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 TRPV5Q9NQA5 729 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 RNF19AQ9NV58 838 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 GPR89AB7ZAQ6 455 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 PENKP01210 267 aaPredicted RBP15.28■□□□□ 0.04
GNE-202ENST00000396594 GPR89BP0CG08 455 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 IL7RP16871 459 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 FBXO46Q6PJ61 603 aaPredicted RBP15.28■□□□□ 0.04
GNE-202ENST00000396594 ZDHHC24Q6UX98 284 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 USP43Q70EL4 1123 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 FAM81AQ8TBF8 368 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 NCSTNQ92542 709 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 ZUFSPQ96AP4 578 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 SMOQ99835 787 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 ACAT2Q9BWD1 397 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 SERTAD3Q9UJW9 196 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 PCDHGB6Q9Y5F9 930 aa15.28■□□□□ 0.04
GNE-202ENST00000396594 OAZ2O95190 189 aa15.27■□□□□ 0.04
GNE-202ENST00000396594 OR5F1O95221 314 aa15.27■□□□□ 0.04
GNE-202ENST00000396594 PGLSO95336 258 aa15.27■□□□□ 0.04
GNE-202ENST00000396594 HBQ1P09105 142 aa15.27■□□□□ 0.04
GNE-202ENST00000396594 PEPDP12955 493 aa15.27■□□□□ 0.04
GNE-202ENST00000396594 SLC13A2Q13183 592 aa15.27■□□□□ 0.04
GNE-202ENST00000396594 DGCR6Q14129 220 aa15.27■□□□□ 0.04
GNE-202ENST00000396594 TRAM1Q15629 374 aa15.27■□□□□ 0.04
GNE-202ENST00000396594 EMC10Q5UCC4 262 aa15.27■□□□□ 0.04
GNE-202ENST00000396594 ZNF781Q8N8C0 355 aa15.27■□□□□ 0.04
GNE-202ENST00000396594 RASGEF1AQ8N9B8 481 aa15.27■□□□□ 0.04
GNE-202ENST00000396594 TP53INP1Q96A56 240 aa15.27■□□□□ 0.04
GNE-202ENST00000396594 ZDHHC7Q9NXF8 308 aa15.27■□□□□ 0.04
GNE-202ENST00000396594 TOR4AQ9NXH8 423 aa15.27■□□□□ 0.04
GNE-202ENST00000396594 PEX12O00623 359 aa15.27■□□□□ 0.04
GNE-202ENST00000396594 ENPP3O14638 875 aa15.27■□□□□ 0.04
GNE-202ENST00000396594 ECI2O75521 394 aa15.27■□□□□ 0.04
GNE-202ENST00000396594 ITGA10O75578 1167 aa15.27■□□□□ 0.04
GNE-202ENST00000396594 GALTP07902 379 aa15.27■□□□□ 0.04
GNE-202ENST00000396594 ZNF3P17036 446 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms