RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 MAB21L2Q9Y586 359 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 MEIS2O14770 477 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 SLC9A3P48764 834 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 ASB12Q8WXK4 309 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 PMEPA1Q969W9 287 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 TMEM109Q9BVC6 243 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 EIF2B3Q9NR50 452 aaKnown RBP13.7□□□□□ -0.22
COL4A3-202ENST00000396578 ELOA3DA6NLF2 546 aaPredicted RBP13.7□□□□□ -0.22
COL4A3-202ENST00000396578 CD72P21854 359 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 VAMP1P23763 118 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 NSG1P42857 185 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 ERVK-8P63133 956 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 GBE1Q04446 702 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 ELOA3BQ3SY89 546 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 AADACL4Q5VUY2 407 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 DNM1P34Q6PK57 102 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 ELOA3Q8NG57 546 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 LRRC58Q96CX6 371 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 PSKH2Q96QS6 385 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 TTPALQ9BTX7 342 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 P2RX2Q9UBL9 471 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 B4GALT4O60513 344 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 GLDCP23378 1020 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 GADD45AP24522 165 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 CCKBRP32239 447 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 PTGER3P43115 390 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 MVKQ03426 396 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 ATAT1Q5SQI0 421 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 PSRC1Q6PGN9 363 aaPredicted RBP13.7□□□□□ -0.22
COL4A3-202ENST00000396578 TMED4Q7Z7H5 227 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 ZNF565Q8N9K5 539 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 ZCCHC10Q8TBK6 192 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 S100A16Q96FQ6 103 aaKnown RBP13.7□□□□□ -0.22
COL4A3-202ENST00000396578 KAZALD1Q96I82 304 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 ANKHQ9HCJ1 492 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 FAM105AQ9NUU6 356 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 PPLO60437 1756 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 MYO9BQ13459 2157 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 PGDP52209 483 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 PTP4A2Q12974 167 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 PACRGLQ8N7B6 248 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 CERKQ8TCT0 537 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 MFSD3Q96ES6 412 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 FUZQ9BT04 418 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 ELOVL2Q9NXB9 296 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 CD84Q9UIB8 345 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 TEX13CA0A0J9YWL9 993 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 MATN3O15232 486 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 STBD1O95210 358 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 DSC2Q02487 901 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 PDE12Q6L8Q7 609 aaKnown RBP13.69□□□□□ -0.22
COL4A3-202ENST00000396578 CD300LFQ8TDQ1 290 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 IRGQQ8WZA9 623 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 C12orf65Q9H3J6 166 aaKnown RBP13.69□□□□□ -0.22
COL4A3-202ENST00000396578 FLRT1Q9NZU1 646 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 AQP12BA6NM10 295 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 RNASEH2AO75792 299 aaKnown RBP13.69□□□□□ -0.22
COL4A3-202ENST00000396578 TAF1AQ15573 450 aaPredicted RBP13.69□□□□□ -0.22
COL4A3-202ENST00000396578 CYP2U1Q7Z449 544 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 CEP97Q8IW35 865 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 AQP12AQ8IXF9 295 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 BRSK1Q8TDC3 778 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 PHB2Q99623 299 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 PTPN18Q99952 460 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 SPATA7Q9P0W8 599 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 LRCH4O75427 683 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 PRNPP04156 253 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 ZNF14P17017 642 aaPredicted RBP13.69□□□□□ -0.22
COL4A3-202ENST00000396578 GJA1P17302 382 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 NDST2P52849 883 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 KLF1Q13351 362 aaPredicted RBP13.69□□□□□ -0.22
COL4A3-202ENST00000396578 ACSBG2Q5FVE4 666 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 TOR1AIP1Q5JTV8 583 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 SPATA31A6Q5VVP1 1343 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 TNFAIP8L2Q6P589 184 aaPredicted RBP13.69□□□□□ -0.22
COL4A3-202ENST00000396578 HID1Q8IV36 788 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 LCN9Q8WX39 176 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 TLCD1Q96CP7 247 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 HSPA12BQ96MM6 686 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 TLR4O00206 839 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 CSTBP04080 98 aaKnown RBP13.69□□□□□ -0.22
COL4A3-202ENST00000396578 GSTM3P21266 225 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 NFKB2Q00653 900 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 AIMP2Q13155 320 aaKnown RBP13.69□□□□□ -0.22
COL4A3-202ENST00000396578 TTLQ8NG68 377 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 TMEM203Q969S6 136 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 KREMEN1Q96MU8 473 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 SLC35A5Q9BS91 424 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 CCSER2Q9H7U1 834 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 ENY2Q9NPA8 101 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 ALKBH4Q9NXW9 302 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 ZNF726A6NNF4 738 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 PDLIM1O00151 329 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 IGFBP4P22692 258 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 CCNFP41002 786 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 FKBP1AP62942 108 aaKnown RBP13.69□□□□□ -0.22
COL4A3-202ENST00000396578 SLC3A1Q07837 685 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 TAF10Q12962 218 aa13.69□□□□□ -0.22
COL4A3-202ENST00000396578 FIP1L1Q6UN15 594 aaKnown RBP13.69□□□□□ -0.22
COL4A3-202ENST00000396578 SDCBP2Q9H190 292 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms