RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 DNAJC8O75937 253 aaPredicted RBP12.32□□□□□ -0.44
TRIM39-204ENST00000396548 IDSP22304 550 aa12.32□□□□□ -0.44
TRIM39-204ENST00000396548 ADSLP30566 484 aaPredicted RBP12.32□□□□□ -0.44
TRIM39-204ENST00000396548 ATP4BP51164 291 aa12.32□□□□□ -0.44
TRIM39-204ENST00000396548 KLF10Q13118 480 aa12.32□□□□□ -0.44
TRIM39-204ENST00000396548 SNX31Q8N9S9 440 aa12.32□□□□□ -0.44
TRIM39-204ENST00000396548 TRIT1Q9H3H1 467 aaKnown RBP12.32□□□□□ -0.44
TRIM39-204ENST00000396548 SPATA7Q9P0W8 599 aa12.32□□□□□ -0.44
TRIM39-204ENST00000396548 PLAGL1Q9UM63 463 aa12.32□□□□□ -0.44
TRIM39-204ENST00000396548 INVSQ9Y283 1065 aa12.32□□□□□ -0.44
TRIM39-204ENST00000396548 PABPN1LA6NDY0 278 aaKnown RBP12.32□□□□□ -0.44
TRIM39-204ENST00000396548 NPIPB8E9PQR5 432 aa12.32□□□□□ -0.44
TRIM39-204ENST00000396548 IFRD1O00458 451 aaPredicted RBP12.32□□□□□ -0.44
TRIM39-204ENST00000396548 LSM1O15116 133 aaKnown RBP12.32□□□□□ -0.44
TRIM39-204ENST00000396548 ATP5HO75947 161 aa12.32□□□□□ -0.44
TRIM39-204ENST00000396548 RPN2P04844 631 aa12.32□□□□□ -0.44
TRIM39-204ENST00000396548 NCF2P19878 526 aaPredicted RBP12.32□□□□□ -0.44
TRIM39-204ENST00000396548 BCKDHBP21953 392 aa12.32□□□□□ -0.44
TRIM39-204ENST00000396548 PRDX6P30041 224 aa12.32□□□□□ -0.44
TRIM39-204ENST00000396548 CORO7P57737 925 aa12.32□□□□□ -0.44
TRIM39-204ENST00000396548 SLCO4C1Q6ZQN7 724 aa12.32□□□□□ -0.44
TRIM39-204ENST00000396548 SFRP1Q8N474 314 aa12.32□□□□□ -0.44
TRIM39-204ENST00000396548 WDR20Q8TBZ3 569 aa12.32□□□□□ -0.44
TRIM39-204ENST00000396548 C12orf66Q96MD2 445 aa12.32□□□□□ -0.44
TRIM39-204ENST00000396548 CATSPER2Q96P56 530 aa12.32□□□□□ -0.44
TRIM39-204ENST00000396548 NECAB3Q96P71 396 aaPredicted RBP12.32□□□□□ -0.44
TRIM39-204ENST00000396548 IL17FQ96PD4 163 aa12.32□□□□□ -0.44
TRIM39-204ENST00000396548 TUBB6Q9BUF5 446 aa12.32□□□□□ -0.44
TRIM39-204ENST00000396548 TCEAL2Q9H3H9 227 aaPredicted RBP12.32□□□□□ -0.44
TRIM39-204ENST00000396548 SCAMP1O15126 338 aa12.31□□□□□ -0.44
TRIM39-204ENST00000396548 AXIN1O15169 862 aa12.31□□□□□ -0.44
TRIM39-204ENST00000396548 THEGLP0DJG4 465 aa12.31□□□□□ -0.44
TRIM39-204ENST00000396548 MTHFD1P11586 935 aaKnown RBP12.31□□□□□ -0.44
TRIM39-204ENST00000396548 JUPP14923 745 aa12.31□□□□□ -0.44
TRIM39-204ENST00000396548 AK4P27144 223 aaPredicted RBP12.31□□□□□ -0.44
TRIM39-204ENST00000396548 THOP1P52888 689 aa12.31□□□□□ -0.44
TRIM39-204ENST00000396548 IQCHQ86VS3 1027 aa12.31□□□□□ -0.44
TRIM39-204ENST00000396548 LINC01555Q8NAE3 123 aa12.31□□□□□ -0.44
TRIM39-204ENST00000396548 SETD7Q8WTS6 366 aaKnown RBP12.31□□□□□ -0.44
TRIM39-204ENST00000396548 NEIL2Q969S2 332 aa12.31□□□□□ -0.44
TRIM39-204ENST00000396548 ATP6V1E2Q96A05 226 aa12.31□□□□□ -0.44
TRIM39-204ENST00000396548 MED8Q96G25 268 aa12.31□□□□□ -0.44
TRIM39-204ENST00000396548 MARK4Q96L34 752 aa12.31□□□□□ -0.44
TRIM39-204ENST00000396548 CAMK1GQ96NX5 476 aa12.31□□□□□ -0.44
TRIM39-204ENST00000396548 LRMDAQ9H2I8 198 aa12.31□□□□□ -0.44
TRIM39-204ENST00000396548 TXLNGQ9NUQ3 528 aa12.31□□□□□ -0.44
TRIM39-204ENST00000396548 STK25O00506 426 aa12.31□□□□□ -0.44
TRIM39-204ENST00000396548 CALB2P22676 271 aa12.31□□□□□ -0.44
TRIM39-204ENST00000396548 PRPH2P23942 346 aa12.31□□□□□ -0.44
TRIM39-204ENST00000396548 HSD17B2P37059 387 aa12.31□□□□□ -0.44
TRIM39-204ENST00000396548 SCIMPQ6UWF3 145 aa12.31□□□□□ -0.44
TRIM39-204ENST00000396548 DCP2Q8IU60 420 aaKnown RBP12.31□□□□□ -0.44
TRIM39-204ENST00000396548 DDIASQ8IXT1 998 aa12.31□□□□□ -0.44
TRIM39-204ENST00000396548 MAML2Q8IZL2 1156 aaPredicted RBP12.31□□□□□ -0.44
TRIM39-204ENST00000396548 MFSD2AQ8NA29 543 aa12.31□□□□□ -0.44
TRIM39-204ENST00000396548 MAGEB10Q96LZ2 347 aaPredicted RBP12.31□□□□□ -0.44
TRIM39-204ENST00000396548 OSGEPL1Q9H4B0 414 aa12.31□□□□□ -0.44
TRIM39-204ENST00000396548 MVB12BQ9H7P6 319 aa12.31□□□□□ -0.44
TRIM39-204ENST00000396548 ZNF624Q9P2J8 865 aaPredicted RBP12.31□□□□□ -0.44
TRIM39-204ENST00000396548 TAGLN3Q9UI15 199 aa12.31□□□□□ -0.44
TRIM39-204ENST00000396548 MOSPD1Q9UJG1 213 aa12.31□□□□□ -0.44
TRIM39-204ENST00000396548 CCDC163A0A0D9SF12 145 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 PRAMEF33A0A0G2JMD5 474 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 OR52A4PA6NMU1 304 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 GIPC1O14908 333 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 PRICKLE3O43900 615 aaPredicted RBP12.3□□□□□ -0.44
TRIM39-204ENST00000396548 NDUFS2O75306 463 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 DOC2AQ14183 400 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 GRHL2Q6ISB3 625 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 CAPN13Q6MZZ7 669 aaPredicted RBP12.3□□□□□ -0.44
TRIM39-204ENST00000396548 LCTLQ6UWM7 567 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 HOMEZQ8IX15 550 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 DEFB119Q8N690 84 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 DNASE2BQ8WZ79 361 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 DUSP15Q9H1R2 295 aaPredicted RBP12.3□□□□□ -0.44
TRIM39-204ENST00000396548 EHD1Q9H4M9 534 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 RRP15Q9Y3B9 282 aaKnown RBP12.3□□□□□ -0.44
TRIM39-204ENST00000396548 H0YIV9 168 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 UBDO15205 165 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 CRCPO75575 148 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 CHEK2O96017 543 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 PDYNP01213 254 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 TNFP01375 233 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 GPX3P22352 226 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 PIK3R1P27986 724 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 PKLRP30613 574 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 ZFP36L2P47974 494 aaKnown RBP12.3□□□□□ -0.44
TRIM39-204ENST00000396548 CHIT1Q13231 466 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 PRKG2Q13237 762 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 C6orf136Q5SQH8 315 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 ATG9BQ674R7 924 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 NXNQ6DKJ4 435 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 IL27RAQ6UWB1 636 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 SLC36A4Q6YBV0 504 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 RINLQ6ZS11 566 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 FBXO27Q8NI29 283 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 FERD3LQ96RJ6 166 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 KIR3DX1Q9H7L2 352 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 ACTR8Q9H981 624 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 GPR45Q9Y5Y3 372 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms