RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 AREL1O15033 823 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 SPINT1O43278 529 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 SNX2O60749 519 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 GPC4O75487 556 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 SRP72O76094 671 aaKnown RBP5.23□□□□□ -1.57
VPS41-203ENST00000395969 RASAL1O95294 804 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 C8GP07360 202 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 RHOP08100 348 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 CYP2A6P11509 494 aaPredicted RBP5.23□□□□□ -1.57
VPS41-203ENST00000395969 TFEBP19484 476 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 GABRR2P28476 465 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 HLA-FP30511 346 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 SPAM1P38567 509 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 NR4A2P43354 598 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 ZFP36L2P47974 494 aaKnown RBP5.23□□□□□ -1.57
VPS41-203ENST00000395969 SLC6A12P48065 614 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 ST13P50502 369 aaKnown RBP5.23□□□□□ -1.57
VPS41-203ENST00000395969 CRADDP78560 199 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 IRF9Q00978 393 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 AQP6Q13520 282 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 USP10Q14694 798 aaKnown RBP5.23□□□□□ -1.57
VPS41-203ENST00000395969 MAPRE2Q15555 327 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 DGKKQ5KSL6 1271 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 SBSNQ6UWP8 590 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 TMC5Q6UXY8 1006 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 SLC16A12Q6ZSM3 486 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 CAMKMTQ7Z624 323 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 ADAMTSL2Q86TH1 951 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 DENND6AQ8IWF6 608 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 NXPE1Q8N323 547 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 CBR4Q8N4T8 237 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 AFAP1L2Q8N4X5 818 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 OXR1Q8N573 874 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 L3MBTL4Q8NA19 623 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 HMGCLL1Q8TB92 370 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 USP7Q93009 1102 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 COX14Q96I36 57 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 TP63Q9H3D4 680 aaPredicted RBP5.23□□□□□ -1.57
VPS41-203ENST00000395969 SP140LQ9H930 580 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 PRDM9Q9NQV7 894 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 FBXO8Q9NRD0 319 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 SDR39U1Q9NRG7 319 aaPredicted RBP5.23□□□□□ -1.57
VPS41-203ENST00000395969 CCM2LQ9NUG4 571 aaPredicted RBP5.23□□□□□ -1.57
VPS41-203ENST00000395969 UCKL1Q9NWZ5 548 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 TMEM181Q9P2C4 612 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 PCDH10Q9P2E7 1040 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 ENPP5Q9UJA9 477 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 PCTPQ9UKL6 214 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 KLK4Q9Y5K2 254 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 COPG1Q9Y678 874 aaKnown RBP5.23□□□□□ -1.57
VPS41-203ENST00000395969 DOCK6Q96HP0 2047 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 MYO18AQ92614 2054 aaKnown RBP5.23□□□□□ -1.57
VPS41-203ENST00000395969 UBA6A0AVT1 1052 aaPredicted RBP5.23□□□□□ -1.57
VPS41-203ENST00000395969 FAM172BPA6NC97 362 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 E2F3O00716 465 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 DPM1O60762 260 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 TBX19O60806 448 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 LILRB5O75023 590 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 UGT2B11O75310 529 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 TIPRLO75663 272 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 KCNH1O95259 989 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 HSD3B1P14060 373 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 AOAHP28039 575 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 MMP12P39900 470 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 CAPGP40121 348 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 NSG1P42857 185 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 ECT2LQ008S8 904 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 LCP2Q13094 533 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 RPA4Q13156 261 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 POU6F1Q14863 301 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 NEDD8Q15843 81 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 CYBRD1Q53TN4 286 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 PPM1JQ5JR12 505 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 CCNYL2Q5T2Q4 361 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 SEL1L3Q68CR1 1132 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 PRMT9Q6P2P2 845 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 ADAMTSL4Q6UY14 1074 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 CCDC81Q6ZN84 652 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 USP45Q70EL2 814 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 LRRC70Q7Z2Q7 622 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 GLT6D1Q7Z4J2 308 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 DEFB128Q7Z7B8 93 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 PTRH1Q86Y79 214 aaKnown RBP5.23□□□□□ -1.57
VPS41-203ENST00000395969 MIB1Q86YT6 1006 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 LACC1Q8IV20 430 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 SLC41A1Q8IVJ1 513 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 CLYBLQ8N0X4 340 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 NAT16Q8N8M0 369 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 ARL14EPQ8N8R7 260 aaPredicted RBP5.23□□□□□ -1.57
VPS41-203ENST00000395969 PAPD5Q8NDF8 572 aaKnown RBP5.23□□□□□ -1.57
VPS41-203ENST00000395969 C7orf57Q8NEG2 295 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 OR2A12Q8NGT7 310 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 POF1BQ8WVV4 589 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 BADQ92934 168 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 NXPE3Q969Y0 559 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 PTERQ96BW5 349 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 FBXL20Q96IG2 436 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 ZSCAN5AQ9BUG6 496 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 SLC12A9Q9BXP2 914 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 SUV39H2Q9H5I1 410 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms