RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 LMNTD1Q8N9Z9 388 aa19.79■□□□□ 0.76
VCPKMT-202ENST00000395860 METTL6Q8TCB7 284 aa19.79■□□□□ 0.76
VCPKMT-202ENST00000395860 OR4K3Q96R72 315 aa19.79■□□□□ 0.76
VCPKMT-202ENST00000395860 RAB11FIP5Q9BXF6 653 aa19.79■□□□□ 0.76
VCPKMT-202ENST00000395860 NUSAP1Q9BXS6 441 aaKnown RBP19.79■□□□□ 0.76
VCPKMT-202ENST00000395860 ZNF624Q9P2J8 865 aaPredicted RBP19.79■□□□□ 0.76
VCPKMT-202ENST00000395860 NCOR1O75376 2440 aa19.79■□□□□ 0.76
VCPKMT-202ENST00000395860 A0A1B0GTW7 788 aa19.78■□□□□ 0.76
VCPKMT-202ENST00000395860 PRR5-ARHGAP8B1AHC4 643 aa19.78■□□□□ 0.76
VCPKMT-202ENST00000395860 GPR37L1O60883 481 aa19.78■□□□□ 0.76
VCPKMT-202ENST00000395860 CAPN1P07384 714 aa19.78■□□□□ 0.76
VCPKMT-202ENST00000395860 CCND1P24385 295 aa19.78■□□□□ 0.76
VCPKMT-202ENST00000395860 HMOX2P30519 316 aa19.78■□□□□ 0.76
VCPKMT-202ENST00000395860 ELOCQ15369 112 aa19.78■□□□□ 0.76
VCPKMT-202ENST00000395860 CYP2A13Q16696 494 aa19.78■□□□□ 0.76
VCPKMT-202ENST00000395860 THEMIS2Q5TEJ8 643 aa19.78■□□□□ 0.76
VCPKMT-202ENST00000395860 CEP68Q76N32 757 aa19.78■□□□□ 0.76
VCPKMT-202ENST00000395860 C2orf73Q8N5S3 287 aaPredicted RBP19.78■□□□□ 0.76
VCPKMT-202ENST00000395860 OR52E1Q8NGJ3 308 aa19.78■□□□□ 0.76
VCPKMT-202ENST00000395860 MIPEPQ99797 713 aa19.78■□□□□ 0.76
VCPKMT-202ENST00000395860 MENTQ9BUN1 341 aa19.78■□□□□ 0.76
VCPKMT-202ENST00000395860 SGPP1Q9BX95 441 aa19.78■□□□□ 0.76
VCPKMT-202ENST00000395860 WDR55Q9H6Y2 383 aaPredicted RBP19.78■□□□□ 0.76
VCPKMT-202ENST00000395860 TRPS1Q9UHF7 1281 aa19.78■□□□□ 0.76
VCPKMT-202ENST00000395860 RNF11Q9Y3C5 154 aa19.78■□□□□ 0.76
VCPKMT-202ENST00000395860 TMEM131Q92545 1883 aa19.78■□□□□ 0.76
VCPKMT-202ENST00000395860 PRAMEF33A0A0G2JMD5 474 aa19.78■□□□□ 0.76
VCPKMT-202ENST00000395860 GOLGA8QA0A0J9YX86 632 aa19.78■□□□□ 0.76
VCPKMT-202ENST00000395860 GOLGA8OA6NCC3 632 aa19.78■□□□□ 0.76
VCPKMT-202ENST00000395860 GOLGA8NF8WBI6 632 aa19.78■□□□□ 0.76
VCPKMT-202ENST00000395860 CLGNO14967 610 aa19.78■□□□□ 0.76
VCPKMT-202ENST00000395860 AVPR2P30518 371 aa19.78■□□□□ 0.76
VCPKMT-202ENST00000395860 RAB28P51157 221 aa19.78■□□□□ 0.76
VCPKMT-202ENST00000395860 IYDQ6PHW0 289 aa19.78■□□□□ 0.76
VCPKMT-202ENST00000395860 ACAD11Q709F0 780 aa19.78■□□□□ 0.76
VCPKMT-202ENST00000395860 DDIASQ8IXT1 998 aa19.78■□□□□ 0.76
VCPKMT-202ENST00000395860 NRTNQ99748 197 aa19.78■□□□□ 0.76
VCPKMT-202ENST00000395860 KIR3DX1Q9H7L2 352 aa19.78■□□□□ 0.76
VCPKMT-202ENST00000395860 MEAF6Q9HAF1 191 aa19.78■□□□□ 0.76
VCPKMT-202ENST00000395860 TCF7L2Q9NQB0 619 aa19.78■□□□□ 0.76
VCPKMT-202ENST00000395860 GPRC5BQ9NZH0 403 aa19.78■□□□□ 0.76
VCPKMT-202ENST00000395860 SPASTQ9UBP0 616 aa19.78■□□□□ 0.76
VCPKMT-202ENST00000395860 DYRK1BQ9Y463 629 aa19.78■□□□□ 0.76
VCPKMT-202ENST00000395860 KCNE2Q9Y6J6 123 aa19.78■□□□□ 0.76
VCPKMT-202ENST00000395860 OR5K4A6NMS3 321 aa19.77■□□□□ 0.76
VCPKMT-202ENST00000395860 SLC2A4P14672 509 aa19.77■□□□□ 0.76
VCPKMT-202ENST00000395860 EPHA3P29320 983 aa19.77■□□□□ 0.76
VCPKMT-202ENST00000395860 CNR2P34972 360 aa19.77■□□□□ 0.76
VCPKMT-202ENST00000395860 SLC19A1P41440 591 aa19.77■□□□□ 0.76
VCPKMT-202ENST00000395860 INHBCP55103 352 aa19.77■□□□□ 0.76
VCPKMT-202ENST00000395860 HNRNPKP61978 463 aaKnown RBP eCLIP19.77■□□□□ 0.76
VCPKMT-202ENST00000395860 IFT88Q13099 833 aa19.77■□□□□ 0.76
VCPKMT-202ENST00000395860 CHIT1Q13231 466 aa19.77■□□□□ 0.76
VCPKMT-202ENST00000395860 TRPM8Q7Z2W7 1104 aa19.77■□□□□ 0.76
VCPKMT-202ENST00000395860 ALYREFQ86V81 257 aaKnown RBP19.77■□□□□ 0.76
VCPKMT-202ENST00000395860 GKN2Q86XP6 184 aa19.77■□□□□ 0.76
VCPKMT-202ENST00000395860 TRIM48Q8IWZ4 208 aa19.77■□□□□ 0.76
VCPKMT-202ENST00000395860 LMX1AQ8TE12 382 aa19.77■□□□□ 0.76
VCPKMT-202ENST00000395860 SH3KBP1Q96B97 665 aa19.77■□□□□ 0.76
VCPKMT-202ENST00000395860 C19orf60Q96EN9 201 aa19.77■□□□□ 0.76
VCPKMT-202ENST00000395860 LRRC37BQ96QE4 947 aa19.77■□□□□ 0.76
VCPKMT-202ENST00000395860 SUSD2Q9UGT4 822 aa19.77■□□□□ 0.76
VCPKMT-202ENST00000395860 DOLKQ9UPQ8 538 aa19.77■□□□□ 0.76
VCPKMT-202ENST00000395860 BTRCQ9Y297 605 aa19.77■□□□□ 0.76
VCPKMT-202ENST00000395860 A0A1B0GVT2 93 aa19.76■□□□□ 0.75
VCPKMT-202ENST00000395860 E7EQ34 232 aa19.76■□□□□ 0.75
VCPKMT-202ENST00000395860 SDHDO14521 159 aa19.76■□□□□ 0.75
VCPKMT-202ENST00000395860 PIP5K1BO14986 540 aa19.76■□□□□ 0.75
VCPKMT-202ENST00000395860 GNAZP19086 355 aa19.76■□□□□ 0.75
VCPKMT-202ENST00000395860 PKLRP30613 574 aa19.76■□□□□ 0.75
VCPKMT-202ENST00000395860 IRF8Q02556 426 aa19.76■□□□□ 0.75
VCPKMT-202ENST00000395860 TUBB3Q13509 450 aa19.76■□□□□ 0.75
VCPKMT-202ENST00000395860 PRAMEF14Q5SWL7 426 aa19.76■□□□□ 0.75
VCPKMT-202ENST00000395860 PRAMEF13Q5VWM6 474 aa19.76■□□□□ 0.75
VCPKMT-202ENST00000395860 C6orf89Q6UWU4 347 aa19.76■□□□□ 0.75
VCPKMT-202ENST00000395860 MTDHQ86UE4 582 aaKnown RBP19.76■□□□□ 0.75
VCPKMT-202ENST00000395860 CHCHD4Q8N4Q1 142 aa19.76■□□□□ 0.75
VCPKMT-202ENST00000395860 FAM46DQ8NEK8 389 aa19.76■□□□□ 0.75
VCPKMT-202ENST00000395860 SETD7Q8WTS6 366 aaKnown RBP19.76■□□□□ 0.75
VCPKMT-202ENST00000395860 STON2Q8WXE9 905 aa19.76■□□□□ 0.75
VCPKMT-202ENST00000395860 SMPDL3AQ92484 453 aa19.76■□□□□ 0.75
VCPKMT-202ENST00000395860 NELL1Q92832 810 aa19.76■□□□□ 0.75
VCPKMT-202ENST00000395860 MAGEB10Q96LZ2 347 aaPredicted RBP19.76■□□□□ 0.75
VCPKMT-202ENST00000395860 OR52B2Q96RD2 323 aa19.76■□□□□ 0.75
VCPKMT-202ENST00000395860 XKR8Q9H6D3 395 aa19.76■□□□□ 0.75
VCPKMT-202ENST00000395860 TMEM74BQ9NUR3 256 aa19.76■□□□□ 0.75
VCPKMT-202ENST00000395860 ZSCAN32Q9NX65 697 aa19.76■□□□□ 0.75
VCPKMT-202ENST00000395860 KIR2DS5A0A0G2JLQ3 304 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 A0A0G2JNG1 304 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 KIR2DS3K7RE56 304 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 UGDHO60701 494 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 NPPBP16860 134 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 XRCC1P18887 633 aaPredicted RBP19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 KIR2DS5Q14953 304 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 ZNF528Q3MIS6 628 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 GGTA1PQ4G0N0 100 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 XKR6Q5GH73 641 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 TCHHL1Q5QJ38 904 aaPredicted RBP19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 NXNQ6DKJ4 435 aa19.75■□□□□ 0.75
VCPKMT-202ENST00000395860 LCTLQ6UWM7 567 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms