RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 BCAT2O15382 392 aaPredicted RBP18.75■□□□□ 0.59
LMNB1-202ENST00000395354 ALDOCP09972 364 aaKnown RBP18.75■□□□□ 0.59
LMNB1-202ENST00000395354 GPX3P22352 226 aa18.75■□□□□ 0.59
LMNB1-202ENST00000395354 HMOX2P30519 316 aa18.75■□□□□ 0.59
LMNB1-202ENST00000395354 ARL1P40616 181 aaPredicted RBP18.75■□□□□ 0.59
LMNB1-202ENST00000395354 GDF5P43026 501 aa18.75■□□□□ 0.59
LMNB1-202ENST00000395354 RABIFP47224 123 aa18.75■□□□□ 0.59
LMNB1-202ENST00000395354 YPEL5P62699 121 aa18.75■□□□□ 0.59
LMNB1-202ENST00000395354 MBOAT1Q6ZNC8 495 aa18.75■□□□□ 0.59
LMNB1-202ENST00000395354 NET1Q7Z628 596 aaPredicted RBP18.75■□□□□ 0.59
LMNB1-202ENST00000395354 OR13H1Q8NG92 308 aa18.75■□□□□ 0.59
LMNB1-202ENST00000395354 HM13Q8TCT9 377 aa18.75■□□□□ 0.59
LMNB1-202ENST00000395354 PIGKQ92643 395 aa18.75■□□□□ 0.59
LMNB1-202ENST00000395354 CCDC138Q96M89 665 aa18.75■□□□□ 0.59
LMNB1-202ENST00000395354 CDK15Q96Q40 435 aa18.75■□□□□ 0.59
LMNB1-202ENST00000395354 SLC25A23Q9BV35 468 aa18.75■□□□□ 0.59
LMNB1-202ENST00000395354 TMEM74BQ9NUR3 256 aa18.75■□□□□ 0.59
LMNB1-202ENST00000395354 PILRBQ9UKJ0 227 aa18.75■□□□□ 0.59
LMNB1-202ENST00000395354 PRPF19Q9UMS4 504 aaKnown RBP18.75■□□□□ 0.59
LMNB1-202ENST00000395354 PTGDR2Q9Y5Y4 395 aa18.75■□□□□ 0.59
LMNB1-202ENST00000395354 DNMT3AQ9Y6K1 912 aaPredicted RBP18.75■□□□□ 0.59
LMNB1-202ENST00000395354 MUC6Q6W4X9 2439 aa18.74■□□□□ 0.59
LMNB1-202ENST00000395354 WDFY4Q6ZS81 3184 aa18.74■□□□□ 0.59
LMNB1-202ENST00000395354 A0A088AWK7 358 aa18.74■□□□□ 0.59
LMNB1-202ENST00000395354 GPR89AB7ZAQ6 455 aa18.74■□□□□ 0.59
LMNB1-202ENST00000395354 H3BM21 787 aa18.74■□□□□ 0.59
LMNB1-202ENST00000395354 CIB2O75838 187 aa18.74■□□□□ 0.59
LMNB1-202ENST00000395354 SNRPB2P08579 225 aaKnown RBP18.74■□□□□ 0.59
LMNB1-202ENST00000395354 HOXC4P09017 264 aaPredicted RBP18.74■□□□□ 0.59
LMNB1-202ENST00000395354 GPR89BP0CG08 455 aa18.74■□□□□ 0.59
LMNB1-202ENST00000395354 MYCLP1P12525 358 aaPredicted RBP18.74■□□□□ 0.59
LMNB1-202ENST00000395354 GNSP15586 552 aa18.74■□□□□ 0.59
LMNB1-202ENST00000395354 ZNF8P17098 575 aaPredicted RBP18.74■□□□□ 0.59
LMNB1-202ENST00000395354 THOP1P52888 689 aa18.74■□□□□ 0.59
LMNB1-202ENST00000395354 ABRQ12979 859 aa18.74■□□□□ 0.59
LMNB1-202ENST00000395354 GRB7Q14451 532 aa18.74■□□□□ 0.59
LMNB1-202ENST00000395354 SMU1Q2TAY7 513 aa18.74■□□□□ 0.59
LMNB1-202ENST00000395354 GGTA1PQ4G0N0 100 aa18.74■□□□□ 0.59
LMNB1-202ENST00000395354 AGKQ53H12 422 aa18.74■□□□□ 0.59
LMNB1-202ENST00000395354 C6orf163Q5TEZ5 329 aa18.74■□□□□ 0.59
LMNB1-202ENST00000395354 TRIM74Q86UV6 250 aa18.74■□□□□ 0.59
LMNB1-202ENST00000395354 TRAPPC5Q8IUR0 188 aa18.74■□□□□ 0.59
LMNB1-202ENST00000395354 SYT12Q8IV01 421 aa18.74■□□□□ 0.59
LMNB1-202ENST00000395354 MIER2Q8N344 545 aa18.74■□□□□ 0.59
LMNB1-202ENST00000395354 OR2L2Q8NH16 312 aa18.74■□□□□ 0.59
LMNB1-202ENST00000395354 HMGCLL1Q8TB92 370 aa18.74■□□□□ 0.59
LMNB1-202ENST00000395354 IRF2BPLQ9H1B7 796 aa18.74■□□□□ 0.59
LMNB1-202ENST00000395354 DPEP2Q9H4A9 486 aa18.74■□□□□ 0.59
LMNB1-202ENST00000395354 SDR39U1Q9NRG7 319 aaPredicted RBP18.74■□□□□ 0.59
LMNB1-202ENST00000395354 RAB23Q9ULC3 237 aa18.74■□□□□ 0.59
LMNB1-202ENST00000395354 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.74■□□□□ 0.59
LMNB1-202ENST00000395354 A0A1W2PR77 199 aa18.73■□□□□ 0.59
LMNB1-202ENST00000395354 KLHL33A6NCF5 533 aa18.73■□□□□ 0.59
LMNB1-202ENST00000395354 MGAT4DA6NG13 374 aa18.73■□□□□ 0.59
LMNB1-202ENST00000395354 ARHGEF33A8MVX0 844 aa18.73■□□□□ 0.59
LMNB1-202ENST00000395354 AIM2O14862 343 aa18.73■□□□□ 0.59
LMNB1-202ENST00000395354 CHUKO15111 745 aa18.73■□□□□ 0.59
LMNB1-202ENST00000395354 CLDN9O95484 217 aa18.73■□□□□ 0.59
LMNB1-202ENST00000395354 LMNAP02545 664 aaKnown RBP18.73■□□□□ 0.59
LMNB1-202ENST00000395354 WNT1P04628 370 aa18.73■□□□□ 0.59
LMNB1-202ENST00000395354 THEGLP0DJG4 465 aa18.73■□□□□ 0.59
LMNB1-202ENST00000395354 CCND1P24385 295 aa18.73■□□□□ 0.59
LMNB1-202ENST00000395354 PREPP48147 710 aa18.73■□□□□ 0.59
LMNB1-202ENST00000395354 NUDT2P50583 147 aa18.73■□□□□ 0.59
LMNB1-202ENST00000395354 AFF3P51826 1226 aaKnown RBP18.73■□□□□ 0.59
LMNB1-202ENST00000395354 ERVK-8P63133 956 aa18.73■□□□□ 0.59
LMNB1-202ENST00000395354 TRMT5Q32P41 509 aaKnown RBP18.73■□□□□ 0.59
LMNB1-202ENST00000395354 PGM2L1Q6PCE3 622 aa18.73■□□□□ 0.59
LMNB1-202ENST00000395354 IQCHQ86VS3 1027 aa18.73■□□□□ 0.59
LMNB1-202ENST00000395354 DEFB107AQ8IZN7 70 aa18.73■□□□□ 0.59
LMNB1-202ENST00000395354 CFAP61Q8NHU2 1237 aa18.73■□□□□ 0.59
LMNB1-202ENST00000395354 TSPEARQ8WU66 669 aa18.73■□□□□ 0.59
LMNB1-202ENST00000395354 ATOH1Q92858 354 aaPredicted RBP18.73■□□□□ 0.59
LMNB1-202ENST00000395354 RCN3Q96D15 328 aa18.73■□□□□ 0.59
LMNB1-202ENST00000395354 MRPL1Q9BYD6 325 aaKnown RBP18.73■□□□□ 0.59
LMNB1-202ENST00000395354 DNAJC11Q9NVH1 559 aa18.73■□□□□ 0.59
LMNB1-202ENST00000395354 GULP1Q9UBP9 304 aa18.73■□□□□ 0.59
LMNB1-202ENST00000395354 SUSD2Q9UGT4 822 aa18.73■□□□□ 0.59
LMNB1-202ENST00000395354 TMEM98Q9Y2Y6 226 aa18.73■□□□□ 0.59
LMNB1-202ENST00000395354 A0A1B0GTW7 788 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 BBIP1A8MTZ0 92 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 SLC28A1O00337 649 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 POP7O75817 140 aaKnown RBP18.72■□□□□ 0.59
LMNB1-202ENST00000395354 HTR1BP28222 390 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 DPP6P42658 865 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 CSNK1EP49674 416 aaKnown RBP18.72■□□□□ 0.59
LMNB1-202ENST00000395354 KIAA1024LP59773 190 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 RPA4Q13156 261 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 KIF19Q2TAC6 998 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 PTCHD3Q3KNS1 767 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 ATP6AP1LQ52LC2 224 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 IL27RAQ6UWB1 636 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 Q6ZSR9 355 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 DCP2Q8IU60 420 aaKnown RBP18.72■□□□□ 0.59
LMNB1-202ENST00000395354 ZNF547Q8IVP9 402 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 DSELQ8IZU8 1212 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 PGAM4Q8N0Y7 254 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 LOXL4Q96JB6 756 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 KCNH6Q9H252 994 aa18.72■□□□□ 0.59
LMNB1-202ENST00000395354 AIG1Q9NVV5 245 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms