RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 ETS2P15036 469 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 CLCN4P51793 760 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 HYAL2Q12891 473 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 SH3D19Q5HYK7 790 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 LNX2Q8N448 690 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 ZNF516Q92618 1163 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 ITM2CQ9NQX7 267 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 TAC3Q9UHF0 121 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 UPK3BL1B0FP48 263 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 UPK3BL2E5RIL1 263 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 HAS3O00219 553 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 CDC7O00311 574 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 ZNF432O94892 652 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 SERPINA3P01011 423 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 S100A9P06702 114 aaKnown RBP10.17□□□□□ -0.78
COL4A6-203ENST00000394872 UNGP13051 313 aaPredicted RBP10.17□□□□□ -0.78
COL4A6-203ENST00000394872 CSNK2A2P19784 350 aaPredicted RBP10.17□□□□□ -0.78
COL4A6-203ENST00000394872 HCAR3P49019 387 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 GANABQ14697 944 aaKnown RBP10.17□□□□□ -0.78
COL4A6-203ENST00000394872 SLC9B2Q86UD5 537 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 CAND1Q86VP6 1230 aaKnown RBP10.17□□□□□ -0.78
COL4A6-203ENST00000394872 NXPE1Q8N323 547 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 ANKFN1Q8N957 763 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 LRTOMTQ8WZ04 291 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 DHRS1Q96LJ7 313 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 C8orf48Q96LL4 319 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 MGME1Q9BQP7 344 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 BCO2Q9BYV7 579 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 CST11Q9H112 138 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 TBC1D17Q9HA65 648 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 TVP23BQ9NYZ1 205 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 PCDHGB5Q9Y5G0 923 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 HS3ST4Q9Y661 456 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 FAM240BA0A1B0GVZ2 78 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 A8MUI8 341 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 J3KR12 359 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 RPL10P27635 214 aaKnown RBP10.17□□□□□ -0.78
COL4A6-203ENST00000394872 ENPP2Q13822 863 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 NCBP2-AS2Q69YL0 99 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 PAQR3Q6TCH7 311 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 LAPTM4BQ86VI4 370 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 CMTM8Q8IZV2 173 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 LRRC57Q8N9N7 239 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 OVCA2Q8WZ82 227 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 NCSTNQ92542 709 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 ARHGAP9Q9BRR9 750 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 SMG9Q9H0W8 520 aaKnown RBP10.17□□□□□ -0.78
COL4A6-203ENST00000394872 GRIP1Q9Y3R0 1128 aa10.17□□□□□ -0.78
COL4A6-203ENST00000394872 H0YGN5 161 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 CPNE3O75131 537 aaKnown RBP10.16□□□□□ -0.78
COL4A6-203ENST00000394872 TRAPPC6AO75865 159 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 KLK1P06870 262 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 ZNF20P17024 532 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 AP3S2P59780 193 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 DLG1Q12959 904 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 OXR1Q8N573 874 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 AVL9Q8NBF6 648 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 OR4E2Q8NGC2 313 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 POF1BQ8WVV4 589 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 EBF3Q9H4W6 596 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 DMAC2Q9NW81 257 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 KLRF1Q9NZS2 232 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 SCDO00767 359 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 CLDN7O95471 211 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 PTGIRP43119 386 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 HERVK_113P63132 956 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 WDR45BQ5MNZ6 344 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 ZNF280BQ86YH2 543 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 CLIP4Q8N3C7 705 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 TMEM156Q8N614 296 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 NIPA2Q8N8Q9 360 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 CMTM7Q96FZ5 175 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 CENPNQ96H22 339 aaPredicted RBP10.16□□□□□ -0.78
COL4A6-203ENST00000394872 ERVK-6Q9BXR3 956 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 TCF7L1Q9HCS4 588 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 PIGVQ9NUD9 493 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 GDAP2Q9NXN4 497 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 VPS29Q9UBQ0 182 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 INSL5Q9Y5Q6 135 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 WASHC1A8K0Z3 465 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 WASH3PC4AMC7 463 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 MAGP20916 626 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 ARCN1P48444 511 aaKnown RBP10.16□□□□□ -0.78
COL4A6-203ENST00000394872 WASH2PQ6VEQ5 465 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 CTU1Q7Z7A3 348 aaKnown RBP10.16□□□□□ -0.78
COL4A6-203ENST00000394872 GAL3ST1Q99999 423 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 SLC35A5Q9BS91 424 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 ADAM7Q9H2U9 754 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 TMEM98Q9Y2Y6 226 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 KHNYNO15037 678 aaKnown RBP10.16□□□□□ -0.78
COL4A6-203ENST00000394872 SP140Q13342 867 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 PCBP2Q15366 365 aaKnown RBP eCLIP10.16□□□□□ -0.78
COL4A6-203ENST00000394872 USP30Q70CQ3 517 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 AKAP14Q86UN6 197 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 OR4K17Q8NGC6 315 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 OR5M3Q8NGP4 307 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 CHCHD6Q9BRQ6 235 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 LGR4Q9BXB1 951 aa10.16□□□□□ -0.78
COL4A6-203ENST00000394872 ZCCHC3Q9NUD5 404 aaKnown RBP10.16□□□□□ -0.78
COL4A6-203ENST00000394872 P2RX2Q9UBL9 471 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms