RNA–Protein interactions for RNA: ENST00000394546.6

TRPT1-202, Transcript of tRNA phosphotransferase 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRPT1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-202ENST00000394546 BANF1O75531 89 aa18.11■□□□□ 0.49
TRPT1-202ENST00000394546 PTPN4P29074 926 aa18.11■□□□□ 0.49
TRPT1-202ENST00000394546 RPL21P46778 160 aaKnown RBP18.11■□□□□ 0.49
TRPT1-202ENST00000394546 CARSP49589 748 aaKnown RBP18.11■□□□□ 0.49
TRPT1-202ENST00000394546 ILF2Q12905 390 aaKnown RBP18.11■□□□□ 0.49
TRPT1-202ENST00000394546 LY6DQ14210 128 aa18.11■□□□□ 0.49
TRPT1-202ENST00000394546 LINC00303Q3SY05 128 aa18.11■□□□□ 0.49
TRPT1-202ENST00000394546 FIGLAQ6QHK4 219 aa18.11■□□□□ 0.49
TRPT1-202ENST00000394546 TAX1BP1Q86VP1 789 aa18.11■□□□□ 0.49
TRPT1-202ENST00000394546 IGDCC3Q8IVU1 814 aa18.11■□□□□ 0.49
TRPT1-202ENST00000394546 PALM2Q8IXS6 379 aa18.11■□□□□ 0.49
TRPT1-202ENST00000394546 DNAJC22Q8N4W6 341 aa18.11■□□□□ 0.49
TRPT1-202ENST00000394546 LMNTD1Q8N9Z9 388 aa18.11■□□□□ 0.49
TRPT1-202ENST00000394546 FBXO15Q8NCQ5 510 aaPredicted RBP18.11■□□□□ 0.49
TRPT1-202ENST00000394546 SMPDL3AQ92484 453 aa18.11■□□□□ 0.49
TRPT1-202ENST00000394546 ADNPQ9H2P0 1102 aa18.11■□□□□ 0.49
TRPT1-202ENST00000394546 FAM60AQ9NP50 221 aa18.11■□□□□ 0.49
TRPT1-202ENST00000394546 UTP6Q9NYH9 597 aaKnown RBP18.11■□□□□ 0.49
TRPT1-202ENST00000394546 WHRNQ9P202 907 aa18.11■□□□□ 0.49
TRPT1-202ENST00000394546 FARSAQ9Y285 508 aaKnown RBP18.11■□□□□ 0.49
TRPT1-202ENST00000394546 UTP11Q9Y3A2 253 aaKnown RBP18.11■□□□□ 0.49
TRPT1-202ENST00000394546 LOC400499M0QZD8 3231 aa18.11■□□□□ 0.49
TRPT1-202ENST00000394546 ARHGEF33A8MVX0 844 aa18.1■□□□□ 0.49
TRPT1-202ENST00000394546 C9J4A7 227 aa18.1■□□□□ 0.49
TRPT1-202ENST00000394546 FANCGO15287 622 aa18.1■□□□□ 0.49
TRPT1-202ENST00000394546 CD63P08962 238 aa18.1■□□□□ 0.49
TRPT1-202ENST00000394546 RAB40ALP0C0E4 278 aa18.1■□□□□ 0.49
TRPT1-202ENST00000394546 MAGP20916 626 aa18.1■□□□□ 0.49
TRPT1-202ENST00000394546 F8A1P23610 371 aa18.1■□□□□ 0.49
TRPT1-202ENST00000394546 CKAP4Q07065 602 aaKnown RBP18.1■□□□□ 0.49
TRPT1-202ENST00000394546 PDIA2Q13087 525 aaKnown RBP18.1■□□□□ 0.49
TRPT1-202ENST00000394546 GPS2Q13227 327 aa18.1■□□□□ 0.49
TRPT1-202ENST00000394546 ZIC1Q15915 447 aa18.1■□□□□ 0.49
TRPT1-202ENST00000394546 HP1BP3Q5SSJ5 553 aaPredicted RBP18.1■□□□□ 0.49
TRPT1-202ENST00000394546 STEAP4Q687X5 459 aa18.1■□□□□ 0.49
TRPT1-202ENST00000394546 ZNF517Q6ZMY9 492 aaPredicted RBP18.1■□□□□ 0.49
TRPT1-202ENST00000394546 SYVN1Q86TM6 617 aa18.1■□□□□ 0.49
TRPT1-202ENST00000394546 C17orf53Q8N3J3 647 aaPredicted RBP18.1■□□□□ 0.49
TRPT1-202ENST00000394546 CD200R1Q8TD46 325 aa18.1■□□□□ 0.49
TRPT1-202ENST00000394546 APOBEC4Q8WW27 367 aaKnown RBP18.1■□□□□ 0.49
TRPT1-202ENST00000394546 ASB11Q8WXH4 323 aa18.1■□□□□ 0.49
TRPT1-202ENST00000394546 DLG3Q92796 817 aa18.1■□□□□ 0.49
TRPT1-202ENST00000394546 NDC1Q9BTX1 674 aa18.1■□□□□ 0.49
TRPT1-202ENST00000394546 ACTL8Q9H568 366 aa18.1■□□□□ 0.49
TRPT1-202ENST00000394546 EURLQ9NYK6 297 aa18.1■□□□□ 0.49
TRPT1-202ENST00000394546 POLHQ9Y253 713 aa18.1■□□□□ 0.49
TRPT1-202ENST00000394546 MRPS18BQ9Y676 258 aaKnown RBP18.1■□□□□ 0.49
TRPT1-202ENST00000394546 ZSCAN9O15535 394 aaPredicted RBP18.09■□□□□ 0.49
TRPT1-202ENST00000394546 CCNDBP1O95273 360 aa18.09■□□□□ 0.49
TRPT1-202ENST00000394546 AHSGP02765 367 aa18.09■□□□□ 0.49
TRPT1-202ENST00000394546 CMPK1P30085 196 aa18.09■□□□□ 0.49
TRPT1-202ENST00000394546 RPA3P35244 121 aaPredicted RBP18.09■□□□□ 0.49
TRPT1-202ENST00000394546 RORAP35398 523 aa18.09■□□□□ 0.49
TRPT1-202ENST00000394546 CUL1Q13616 776 aa18.09■□□□□ 0.49
TRPT1-202ENST00000394546 ERV3-1Q14264 604 aa18.09■□□□□ 0.49
TRPT1-202ENST00000394546 DEFB109BQ30KR1 87 aa18.09■□□□□ 0.49
TRPT1-202ENST00000394546 CCSMST1Q4G0I0 132 aa18.09■□□□□ 0.49
TRPT1-202ENST00000394546 TCTE1Q5JU00 501 aa18.09■□□□□ 0.49
TRPT1-202ENST00000394546 TEDDM1Q5T9Z0 273 aa18.09■□□□□ 0.49
TRPT1-202ENST00000394546 FAM199XQ6PEV8 388 aaPredicted RBP18.09■□□□□ 0.49
TRPT1-202ENST00000394546 ANKMY2Q8IV38 441 aa18.09■□□□□ 0.49
TRPT1-202ENST00000394546 MCATQ8IVS2 390 aaKnown RBP18.09■□□□□ 0.49
TRPT1-202ENST00000394546 SYTL1Q8IYJ3 562 aa18.09■□□□□ 0.49
TRPT1-202ENST00000394546 SLC38A9Q8NBW4 561 aa18.09■□□□□ 0.49
TRPT1-202ENST00000394546 PROKR1Q8TCW9 393 aa18.09■□□□□ 0.49
TRPT1-202ENST00000394546 PWWP2AQ96N64 755 aa18.09■□□□□ 0.49
TRPT1-202ENST00000394546 NLNQ9BYT8 704 aa18.09■□□□□ 0.49
TRPT1-202ENST00000394546 RAB17Q9H0T7 212 aa18.09■□□□□ 0.49
TRPT1-202ENST00000394546 CHST8Q9H2A9 424 aa18.09■□□□□ 0.49
TRPT1-202ENST00000394546 TXLNGQ9NUQ3 528 aa18.09■□□□□ 0.49
TRPT1-202ENST00000394546 PCMTD2Q9NV79 361 aa18.09■□□□□ 0.49
TRPT1-202ENST00000394546 GEMIN8Q9NWZ8 242 aaKnown RBP18.09■□□□□ 0.49
TRPT1-202ENST00000394546 NSMCE4AQ9NXX6 385 aa18.09■□□□□ 0.49
TRPT1-202ENST00000394546 ZFATQ9P243 1243 aa18.09■□□□□ 0.49
TRPT1-202ENST00000394546 TUBD1Q9UJT1 453 aa18.09■□□□□ 0.49
TRPT1-202ENST00000394546 MED16Q9Y2X0 877 aa18.09■□□□□ 0.49
TRPT1-202ENST00000394546 KLK4Q9Y5K2 254 aa18.09■□□□□ 0.49
TRPT1-202ENST00000394546 PABPN1LA6NDY0 278 aaKnown RBP18.08■□□□□ 0.48
TRPT1-202ENST00000394546 GFYI3L273 518 aa18.08■□□□□ 0.48
TRPT1-202ENST00000394546 EIF3HO15372 352 aaKnown RBP eCLIP18.08■□□□□ 0.48
TRPT1-202ENST00000394546 PRICKLE3O43900 615 aaPredicted RBP18.08■□□□□ 0.48
TRPT1-202ENST00000394546 SYF2O95926 243 aaKnown RBP18.08■□□□□ 0.48
TRPT1-202ENST00000394546 PRB1P04280 392 aa18.08■□□□□ 0.48
TRPT1-202ENST00000394546 FAM87AP0C7U9 286 aa18.08■□□□□ 0.48
TRPT1-202ENST00000394546 ERGP11308 486 aa18.08■□□□□ 0.48
TRPT1-202ENST00000394546 MCM3P25205 808 aa18.08■□□□□ 0.48
TRPT1-202ENST00000394546 GABRA4P48169 554 aa18.08■□□□□ 0.48
TRPT1-202ENST00000394546 PNLIPRP1P54315 467 aa18.08■□□□□ 0.48
TRPT1-202ENST00000394546 ARSFP54793 590 aa18.08■□□□□ 0.48
TRPT1-202ENST00000394546 CAV1Q03135 178 aa18.08■□□□□ 0.48
TRPT1-202ENST00000394546 MGAT5Q09328 741 aa18.08■□□□□ 0.48
TRPT1-202ENST00000394546 CBLBQ13191 982 aa18.08■□□□□ 0.48
TRPT1-202ENST00000394546 DEFB110Q30KQ9 67 aa18.08■□□□□ 0.48
TRPT1-202ENST00000394546 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.08■□□□□ 0.48
TRPT1-202ENST00000394546 PRAMEF17Q5VTA0 474 aa18.08■□□□□ 0.48
TRPT1-202ENST00000394546 YOD1Q5VVQ6 348 aaPredicted RBP18.08■□□□□ 0.48
TRPT1-202ENST00000394546 RHBDD2Q6NTF9 364 aa18.08■□□□□ 0.48
TRPT1-202ENST00000394546 FAM20CQ8IXL6 584 aa18.08■□□□□ 0.48
TRPT1-202ENST00000394546 CPNE9Q8IYJ1 553 aa18.08■□□□□ 0.48
TRPT1-202ENST00000394546 FBXO36Q8NEA4 188 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms