RNA–Protein interactions for RNA: ENST00000394157.7

PSEN1-203, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 1,249 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-203ENST00000394157 MED4Q9NPJ6 270 aa18.72■□□□□ 0.59
PSEN1-203ENST00000394157 CPSF2Q9P2I0 782 aaKnown RBP18.72■□□□□ 0.59
PSEN1-203ENST00000394157 PTBP2Q9UKA9 531 aaKnown RBP18.72■□□□□ 0.59
PSEN1-203ENST00000394157 EMCNQ9ULC0 261 aa18.72■□□□□ 0.59
PSEN1-203ENST00000394157 TNPO3Q9Y5L0 923 aaKnown RBP18.72■□□□□ 0.59
PSEN1-203ENST00000394157 PIPSLA2A3N6 862 aa18.71■□□□□ 0.59
PSEN1-203ENST00000394157 C2orf74A8MZ97 194 aa18.71■□□□□ 0.59
PSEN1-203ENST00000394157 STX16-NPEPL1H3BU86 382 aa18.71■□□□□ 0.59
PSEN1-203ENST00000394157 BTN3A3O00478 584 aa18.71■□□□□ 0.59
PSEN1-203ENST00000394157 STX16O14662 325 aa18.71■□□□□ 0.59
PSEN1-203ENST00000394157 SPAG7O75391 227 aa18.71■□□□□ 0.59
PSEN1-203ENST00000394157 CPNE6O95741 557 aa18.71■□□□□ 0.59
PSEN1-203ENST00000394157 SBK3P0C264 359 aa18.71■□□□□ 0.59
PSEN1-203ENST00000394157 GFAPP14136 432 aa18.71■□□□□ 0.59
PSEN1-203ENST00000394157 CREB1P16220 341 aa18.71■□□□□ 0.59
PSEN1-203ENST00000394157 ATP5F1P24539 256 aaPredicted RBP18.71■□□□□ 0.59
PSEN1-203ENST00000394157 NFKB2Q00653 900 aa18.71■□□□□ 0.59
PSEN1-203ENST00000394157 CAPN13Q6MZZ7 669 aaPredicted RBP18.71■□□□□ 0.59
PSEN1-203ENST00000394157 C16orf46Q6P387 395 aa18.71■□□□□ 0.59
PSEN1-203ENST00000394157 SLC22A9Q8IVM8 553 aa18.71■□□□□ 0.59
PSEN1-203ENST00000394157 LRRC56Q8IYG6 542 aaPredicted RBP18.71■□□□□ 0.59
PSEN1-203ENST00000394157 FBXO39Q8N4B4 442 aa18.71■□□□□ 0.59
PSEN1-203ENST00000394157 OR56A3Q8NH54 315 aa18.71■□□□□ 0.59
PSEN1-203ENST00000394157 EXT2Q93063 718 aa18.71■□□□□ 0.59
PSEN1-203ENST00000394157 ZBTB9Q96C00 473 aa18.71■□□□□ 0.59
PSEN1-203ENST00000394157 ZDHHC12Q96GR4 267 aa18.71■□□□□ 0.59
PSEN1-203ENST00000394157 CD180Q99467 661 aa18.71■□□□□ 0.59
PSEN1-203ENST00000394157 MIPEPQ99797 713 aa18.71■□□□□ 0.59
PSEN1-203ENST00000394157 ABCG4Q9H172 646 aa18.71■□□□□ 0.59
PSEN1-203ENST00000394157 CCDC177Q9NQR7 707 aaPredicted RBP18.71■□□□□ 0.59
PSEN1-203ENST00000394157 WWOXQ9NZC7 414 aa18.71■□□□□ 0.59
PSEN1-203ENST00000394157 OGFRQ9NZT2 677 aa18.71■□□□□ 0.59
PSEN1-203ENST00000394157 CIDEBQ9UHD4 219 aa18.71■□□□□ 0.59
PSEN1-203ENST00000394157 NCF1BA6NI72 391 aaPredicted RBP18.7■□□□□ 0.58
PSEN1-203ENST00000394157 NCF1CA8MVU1 366 aaPredicted RBP18.7■□□□□ 0.58
PSEN1-203ENST00000394157 NTN3O00634 580 aaPredicted RBP18.7■□□□□ 0.58
PSEN1-203ENST00000394157 RPLP0P05388 317 aaKnown RBP18.7■□□□□ 0.58
PSEN1-203ENST00000394157 MYL2P10916 166 aa18.7■□□□□ 0.58
PSEN1-203ENST00000394157 NCF1P14598 390 aaPredicted RBP18.7■□□□□ 0.58
PSEN1-203ENST00000394157 TYRP1P17643 537 aa18.7■□□□□ 0.58
PSEN1-203ENST00000394157 OAS2P29728 719 aaKnown RBP18.7■□□□□ 0.58
PSEN1-203ENST00000394157 SLC6A12P48065 614 aa18.7■□□□□ 0.58
PSEN1-203ENST00000394157 PPM1FP49593 454 aaPredicted RBP18.7■□□□□ 0.58
PSEN1-203ENST00000394157 SETDB1Q15047 1291 aa18.7■□□□□ 0.58
PSEN1-203ENST00000394157 AMZ1Q400G9 498 aa18.7■□□□□ 0.58
PSEN1-203ENST00000394157 TTMPQ5BVD1 217 aa18.7■□□□□ 0.58
PSEN1-203ENST00000394157 MBOAT1Q6ZNC8 495 aa18.7■□□□□ 0.58
PSEN1-203ENST00000394157 RAB44Q7Z6P3 723 aaPredicted RBP18.7■□□□□ 0.58
PSEN1-203ENST00000394157 JPH3Q8WXH2 748 aaPredicted RBP18.7■□□□□ 0.58
PSEN1-203ENST00000394157 RSC1A1Q92681 617 aa18.7■□□□□ 0.58
PSEN1-203ENST00000394157 SGPP1Q9BX95 441 aa18.7■□□□□ 0.58
PSEN1-203ENST00000394157 KCNK9Q9NPC2 374 aa18.7■□□□□ 0.58
PSEN1-203ENST00000394157 APOBEC2Q9Y235 224 aaKnown RBP18.7■□□□□ 0.58
PSEN1-203ENST00000394157 PCDHB11Q9Y5F2 797 aa18.7■□□□□ 0.58
PSEN1-203ENST00000394157 PIEZO1Q92508 2521 aa18.7■□□□□ 0.58
PSEN1-203ENST00000394157 KRT87PA6NCN2 255 aa18.69■□□□□ 0.58
PSEN1-203ENST00000394157 PCNX2A6NKB5 2137 aa18.69■□□□□ 0.58
PSEN1-203ENST00000394157 PRICKLE3O43900 615 aaPredicted RBP18.69■□□□□ 0.58
PSEN1-203ENST00000394157 STK16O75716 305 aa18.69■□□□□ 0.58
PSEN1-203ENST00000394157 CCNDBP1O95273 360 aa18.69■□□□□ 0.58
PSEN1-203ENST00000394157 CPA3P15088 417 aa18.69■□□□□ 0.58
PSEN1-203ENST00000394157 POLR2CP19387 275 aaPredicted RBP18.69■□□□□ 0.58
PSEN1-203ENST00000394157 RPA3P35244 121 aaPredicted RBP18.69■□□□□ 0.58
PSEN1-203ENST00000394157 NAA20P61599 178 aa18.69■□□□□ 0.58
PSEN1-203ENST00000394157 CCL7P80098 99 aa18.69■□□□□ 0.58
PSEN1-203ENST00000394157 NAE1Q13564 534 aa18.69■□□□□ 0.58
PSEN1-203ENST00000394157 NAA25Q14CX7 972 aa18.69■□□□□ 0.58
PSEN1-203ENST00000394157 PCBP2Q15366 365 aaKnown RBP eCLIP18.69■□□□□ 0.58
PSEN1-203ENST00000394157 PFKFB4Q16877 469 aa18.69■□□□□ 0.58
PSEN1-203ENST00000394157 RSPO4Q2I0M5 234 aaPredicted RBP18.69■□□□□ 0.58
PSEN1-203ENST00000394157 TMEM71Q6P5X7 295 aa18.69■□□□□ 0.58
PSEN1-203ENST00000394157 ZYG11AQ6WRX3 759 aa18.69■□□□□ 0.58
PSEN1-203ENST00000394157 CCDC63Q8NA47 563 aa18.69■□□□□ 0.58
PSEN1-203ENST00000394157 NCSTNQ92542 709 aa18.69■□□□□ 0.58
PSEN1-203ENST00000394157 FAM111AQ96PZ2 611 aa18.69■□□□□ 0.58
PSEN1-203ENST00000394157 GFM1Q96RP9 751 aaKnown RBP18.69■□□□□ 0.58
PSEN1-203ENST00000394157 HAUS8Q9BT25 410 aa18.69■□□□□ 0.58
PSEN1-203ENST00000394157 CAPS2Q9BXY5 557 aa18.69■□□□□ 0.58
PSEN1-203ENST00000394157 CD244Q9BZW8 370 aa18.69■□□□□ 0.58
PSEN1-203ENST00000394157 ATG10Q9H0Y0 220 aa18.69■□□□□ 0.58
PSEN1-203ENST00000394157 TOR4AQ9NXH8 423 aa18.69■□□□□ 0.58
PSEN1-203ENST00000394157 ACTR10Q9NZ32 417 aa18.69■□□□□ 0.58
PSEN1-203ENST00000394157 COPG2Q9UBF2 871 aa18.69■□□□□ 0.58
PSEN1-203ENST00000394157 POMT2Q9UKY4 750 aa18.69■□□□□ 0.58
PSEN1-203ENST00000394157 MN1Q10571 1320 aaPredicted RBP18.69■□□□□ 0.58
PSEN1-203ENST00000394157 ASXL3Q9C0F0 2248 aa18.68■□□□□ 0.58
PSEN1-203ENST00000394157 A0A1W2PQM1 296 aa18.68■□□□□ 0.58
PSEN1-203ENST00000394157 GSAPA4D1B5 854 aa18.68■□□□□ 0.58
PSEN1-203ENST00000394157 ISM1B1AKI9 464 aa18.68■□□□□ 0.58
PSEN1-203ENST00000394157 G3V2L1 256 aa18.68■□□□□ 0.58
PSEN1-203ENST00000394157 TOX3O15405 576 aaPredicted RBP18.68■□□□□ 0.58
PSEN1-203ENST00000394157 TAPBPO15533 448 aa18.68■□□□□ 0.58
PSEN1-203ENST00000394157 DKK1O94907 266 aa18.68■□□□□ 0.58
PSEN1-203ENST00000394157 C9P02748 559 aa18.68■□□□□ 0.58
PSEN1-203ENST00000394157 PIK3CGP48736 1102 aa18.68■□□□□ 0.58
PSEN1-203ENST00000394157 NOVA1P51513 510 aaKnown RBP18.68■□□□□ 0.58
PSEN1-203ENST00000394157 TBPL1P62380 186 aa18.68■□□□□ 0.58
PSEN1-203ENST00000394157 ABATP80404 500 aa18.68■□□□□ 0.58
PSEN1-203ENST00000394157 ASPHQ12797 758 aa18.68■□□□□ 0.58
PSEN1-203ENST00000394157 SPIDRQ14159 915 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms