RNA–Protein interactions for RNA: ENST00000394013.6

RNF41-202, Transcript of ring finger protein 41, humanhuman

TSL 1 (best) BASIC

Gene RNF41, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-202ENST00000394013 GDE1Q9NZC3 331 aa13.89□□□□□ -0.19
RNF41-202ENST00000394013 EPS15L1Q9UBC2 864 aa13.89□□□□□ -0.19
RNF41-202ENST00000394013 TNRC18O15417 2968 aaPredicted RBP13.89□□□□□ -0.19
RNF41-202ENST00000394013 SLC28A1O00337 649 aa13.89□□□□□ -0.19
RNF41-202ENST00000394013 ENO2P09104 434 aaPredicted RBP13.89□□□□□ -0.19
RNF41-202ENST00000394013 IRF8Q02556 426 aa13.89□□□□□ -0.19
RNF41-202ENST00000394013 PYCR3Q53H96 274 aa13.89□□□□□ -0.19
RNF41-202ENST00000394013 TRMT11Q7Z4G4 463 aaKnown RBP13.89□□□□□ -0.19
RNF41-202ENST00000394013 TICAM1Q8IUC6 712 aa13.89□□□□□ -0.19
RNF41-202ENST00000394013 PPWD1Q96BP3 646 aaKnown RBP13.89□□□□□ -0.19
RNF41-202ENST00000394013 MYOCQ99972 504 aa13.89□□□□□ -0.19
RNF41-202ENST00000394013 RPF2Q9H7B2 306 aaKnown RBP13.89□□□□□ -0.19
RNF41-202ENST00000394013 COQ10BQ9H8M1 238 aa13.89□□□□□ -0.19
RNF41-202ENST00000394013 PRM3Q9NNZ6 103 aa13.89□□□□□ -0.19
RNF41-202ENST00000394013 DYRK4Q9NR20 520 aa13.89□□□□□ -0.19
RNF41-202ENST00000394013 THG1LQ9NWX6 298 aaKnown RBP13.89□□□□□ -0.19
RNF41-202ENST00000394013 CLEC1BQ9P126 229 aa13.89□□□□□ -0.19
RNF41-202ENST00000394013 THAP10Q9P2Z0 257 aaPredicted RBP13.89□□□□□ -0.19
RNF41-202ENST00000394013 NFKBIL1Q9UBC1 381 aaPredicted RBP13.89□□□□□ -0.19
RNF41-202ENST00000394013 EIF3LQ9Y262 564 aaKnown RBP13.89□□□□□ -0.19
RNF41-202ENST00000394013 OR1A2Q9Y585 309 aa13.89□□□□□ -0.19
RNF41-202ENST00000394013 FADS3Q9Y5Q0 445 aa13.89□□□□□ -0.19
RNF41-202ENST00000394013 STON1Q9Y6Q2 735 aa13.89□□□□□ -0.19
RNF41-202ENST00000394013 A0A1W2PP55 124 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 KANSL1LA0AUZ9 987 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 C7orf72A4D263 438 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 PABPN1LA6NDY0 278 aaKnown RBP13.88□□□□□ -0.19
RNF41-202ENST00000394013 SAC3D1A6NKF1 404 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 H3BM21 787 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 PDLIM1O00151 329 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 POP7O75817 140 aaKnown RBP13.88□□□□□ -0.19
RNF41-202ENST00000394013 PAPLNO95428 1278 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 KRT6AP02538 564 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 KRT6BP04259 564 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 HSD17B1P14061 328 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 NELFEP18615 380 aaKnown RBP13.88□□□□□ -0.19
RNF41-202ENST00000394013 SDC1P18827 310 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 JAK1P23458 1154 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 CDKN2CP42773 168 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 KRT6CP48668 564 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 MRPL19P49406 292 aaKnown RBP13.88□□□□□ -0.19
RNF41-202ENST00000394013 VASPP50552 380 aaPredicted RBP13.88□□□□□ -0.19
RNF41-202ENST00000394013 TRAP1Q12931 704 aaKnown RBP13.88□□□□□ -0.19
RNF41-202ENST00000394013 STARD3Q14849 445 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 ANKRD54Q6NXT1 300 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 ZFP1Q6P2D0 407 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 YAF2Q8IY57 180 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 ZNF480Q8WV37 535 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 SLC13A3Q8WWT9 602 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 GTF2H4Q92759 462 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 NEIL2Q969S2 332 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 FBXL8Q96CD0 374 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 TBCDQ9BTW9 1192 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 SPNS1Q9H2V7 528 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 PFDN4Q9NQP4 134 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 UBAP1Q9NZ09 502 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 GPRC5BQ9NZH0 403 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 KNL1Q8NG31 2342 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 A0A1B0GTW7 788 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 SMNDC1O75940 238 aaKnown RBP eCLIP13.88□□□□□ -0.19
RNF41-202ENST00000394013 PCDH8O95206 1070 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 GRIK2Q13002 908 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 IER5LQ5T953 404 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 FRG2Q64ET8 278 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 IRGCQ6NXR0 463 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 C11orf96Q7Z7L8 435 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 HEATR4Q86WZ0 1026 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 L3MBTL4Q8NA19 623 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 TIFAQ96CG3 184 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 FRG2BQ96QU4 278 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 SEPHS2Q99611 448 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 CGREF1Q99674 301 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 CCT7Q99832 543 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 OSBPL6Q9BZF3 934 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 CD93Q9NPY3 652 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 PCM1Q15154 2024 aa13.88□□□□□ -0.19
RNF41-202ENST00000394013 EIF3FO00303 357 aaPredicted RBP13.87□□□□□ -0.19
RNF41-202ENST00000394013 C1orf105O95561 183 aa13.87□□□□□ -0.19
RNF41-202ENST00000394013 GBAP04062 536 aa13.87□□□□□ -0.19
RNF41-202ENST00000394013 PGRP06401 933 aa13.87□□□□□ -0.19
RNF41-202ENST00000394013 LYNP07948 512 aa13.87□□□□□ -0.19
RNF41-202ENST00000394013 UQCRBP14927 111 aa13.87□□□□□ -0.19
RNF41-202ENST00000394013 RPL10P27635 214 aaKnown RBP13.87□□□□□ -0.19
RNF41-202ENST00000394013 HNMTP50135 292 aa13.87□□□□□ -0.19
RNF41-202ENST00000394013 SP140Q13342 867 aa13.87□□□□□ -0.19
RNF41-202ENST00000394013 COL9A2Q14055 689 aaPredicted RBP13.87□□□□□ -0.19
RNF41-202ENST00000394013 FGL2Q14314 439 aa13.87□□□□□ -0.19
RNF41-202ENST00000394013 EIF4HQ15056 248 aaKnown RBP13.87□□□□□ -0.19
RNF41-202ENST00000394013 PGS1Q32NB8 556 aa13.87□□□□□ -0.19
RNF41-202ENST00000394013 DUS1LQ6P1R4 473 aaKnown RBP13.87□□□□□ -0.19
RNF41-202ENST00000394013 NRSN1Q8IZ57 195 aa13.87□□□□□ -0.19
RNF41-202ENST00000394013 PLCD3Q8N3E9 789 aa13.87□□□□□ -0.19
RNF41-202ENST00000394013 CPA6Q8N4T0 437 aa13.87□□□□□ -0.19
RNF41-202ENST00000394013 FAM86B1Q8N7N1 296 aa13.87□□□□□ -0.19
RNF41-202ENST00000394013 CXorf40AQ8TE69 158 aa13.87□□□□□ -0.19
RNF41-202ENST00000394013 GLMNQ92990 594 aa13.87□□□□□ -0.19
RNF41-202ENST00000394013 CARS2Q9HA77 564 aaKnown RBP13.87□□□□□ -0.19
RNF41-202ENST00000394013 TRPV4Q9HBA0 871 aa13.87□□□□□ -0.19
RNF41-202ENST00000394013 UTS2RQ9UKP6 389 aa13.87□□□□□ -0.19
RNF41-202ENST00000394013 ERVK-11Q9UQG0 969 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms