RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 CAPN13Q6MZZ7 669 aaPredicted RBP23.52■■□□□ 1.36
LRFN4-202ENST00000393952 SUSD1Q6UWL2 747 aa23.52■■□□□ 1.36
LRFN4-202ENST00000393952 CPLX4Q7Z7G2 160 aa23.52■■□□□ 1.36
LRFN4-202ENST00000393952 RAB42Q8N4Z0 105 aa23.52■■□□□ 1.36
LRFN4-202ENST00000393952 OR52B6Q8NGF0 335 aa23.52■■□□□ 1.36
LRFN4-202ENST00000393952 MAPK15Q8TD08 544 aa23.52■■□□□ 1.36
LRFN4-202ENST00000393952 OR4K3Q96R72 315 aa23.52■■□□□ 1.36
LRFN4-202ENST00000393952 SGPP1Q9BX95 441 aa23.52■■□□□ 1.36
LRFN4-202ENST00000393952 GAREM1Q9H706 876 aa23.52■■□□□ 1.36
LRFN4-202ENST00000393952 PSD3Q9NYI0 1048 aa23.52■■□□□ 1.36
LRFN4-202ENST00000393952 ZDHHC2Q9UIJ5 367 aa23.52■■□□□ 1.36
LRFN4-202ENST00000393952 PCDHGA5Q9Y5G8 931 aa23.52■■□□□ 1.36
LRFN4-202ENST00000393952 CUL9Q8IWT3 2517 aa23.51■■□□□ 1.35
LRFN4-202ENST00000393952 NOBOXO60393 691 aa23.51■■□□□ 1.35
LRFN4-202ENST00000393952 KITP10721 976 aa23.51■■□□□ 1.35
LRFN4-202ENST00000393952 PRDX3P30048 256 aaKnown RBP23.51■■□□□ 1.35
LRFN4-202ENST00000393952 PIK3CGP48736 1102 aa23.51■■□□□ 1.35
LRFN4-202ENST00000393952 SF3A3Q12874 501 aaKnown RBP eCLIP23.51■■□□□ 1.35
LRFN4-202ENST00000393952 GPR18Q14330 331 aa23.51■■□□□ 1.35
LRFN4-202ENST00000393952 SYVN1Q86TM6 617 aa23.51■■□□□ 1.35
LRFN4-202ENST00000393952 SLC9B2Q86UD5 537 aa23.51■■□□□ 1.35
LRFN4-202ENST00000393952 LINC01555Q8NAE3 123 aa23.51■■□□□ 1.35
LRFN4-202ENST00000393952 OR2I1PQ8NGU4 316 aa23.51■■□□□ 1.35
LRFN4-202ENST00000393952 AGAP11Q8TF27 550 aa23.51■■□□□ 1.35
LRFN4-202ENST00000393952 LCN9Q8WX39 176 aa23.51■■□□□ 1.35
LRFN4-202ENST00000393952 THOC1Q96FV9 657 aaKnown RBP23.51■■□□□ 1.35
LRFN4-202ENST00000393952 CCT8L2Q96SF2 557 aa23.51■■□□□ 1.35
LRFN4-202ENST00000393952 RAB11FIP5Q9BXF6 653 aa23.51■■□□□ 1.35
LRFN4-202ENST00000393952 NSRP1Q9H0G5 558 aaKnown RBP23.51■■□□□ 1.35
LRFN4-202ENST00000393952 CCDC177Q9NQR7 707 aaPredicted RBP23.51■■□□□ 1.35
LRFN4-202ENST00000393952 HAO1Q9UJM8 370 aa23.51■■□□□ 1.35
LRFN4-202ENST00000393952 GPR179Q6PRD1 2367 aa23.5■■□□□ 1.35
LRFN4-202ENST00000393952 PCM1Q15154 2024 aa23.5■■□□□ 1.35
LRFN4-202ENST00000393952 ZNF839A8K0R7 811 aa23.5■■□□□ 1.35
LRFN4-202ENST00000393952 ARHGAP33O14559 1287 aa23.5■■□□□ 1.35
LRFN4-202ENST00000393952 KDM1AO60341 852 aa23.5■■□□□ 1.35
LRFN4-202ENST00000393952 SNUPNO95149 360 aaKnown RBP23.5■■□□□ 1.35
LRFN4-202ENST00000393952 IL27RAQ6UWB1 636 aa23.5■■□□□ 1.35
LRFN4-202ENST00000393952 KANSL1Q7Z3B3 1105 aa23.5■■□□□ 1.35
LRFN4-202ENST00000393952 DCBLD1Q8N8Z6 715 aa23.5■■□□□ 1.35
LRFN4-202ENST00000393952 PRSS33Q8NF86 280 aa23.5■■□□□ 1.35
LRFN4-202ENST00000393952 OR2L8Q8NGY9 312 aa23.5■■□□□ 1.35
LRFN4-202ENST00000393952 ATP6V1E2Q96A05 226 aa23.5■■□□□ 1.35
LRFN4-202ENST00000393952 ZNF382Q96SR6 550 aa23.5■■□□□ 1.35
LRFN4-202ENST00000393952 ZNF225Q9UK10 706 aa23.5■■□□□ 1.35
LRFN4-202ENST00000393952 EPB41L3Q9Y2J2 1087 aaPredicted RBP23.5■■□□□ 1.35
LRFN4-202ENST00000393952 TMEM233B4DJY2 109 aa23.49■■□□□ 1.35
LRFN4-202ENST00000393952 GIMD1P0DJR0 217 aa23.49■■□□□ 1.35
LRFN4-202ENST00000393952 HHEXQ03014 270 aa23.49■■□□□ 1.35
LRFN4-202ENST00000393952 TCF15Q12870 199 aa23.49■■□□□ 1.35
LRFN4-202ENST00000393952 CDC16Q13042 620 aa23.49■■□□□ 1.35
LRFN4-202ENST00000393952 TRAF3Q13114 568 aa23.49■■□□□ 1.35
LRFN4-202ENST00000393952 SH2D4BQ5SQS7 431 aa23.49■■□□□ 1.35
LRFN4-202ENST00000393952 OGFOD3Q6PK18 319 aa23.49■■□□□ 1.35
LRFN4-202ENST00000393952 GPRIN3Q6ZVF9 776 aa23.49■■□□□ 1.35
LRFN4-202ENST00000393952 C17orf82Q86X59 251 aaPredicted RBP23.49■■□□□ 1.35
LRFN4-202ENST00000393952 GATAD2AQ86YP4 633 aa23.49■■□□□ 1.35
LRFN4-202ENST00000393952 ARL14Q8N4G2 192 aa23.49■■□□□ 1.35
LRFN4-202ENST00000393952 OR4E2Q8NGC2 313 aa23.49■■□□□ 1.35
LRFN4-202ENST00000393952 ZFPM2Q8WW38 1151 aa23.49■■□□□ 1.35
LRFN4-202ENST00000393952 SMPDL3AQ92484 453 aa23.49■■□□□ 1.35
LRFN4-202ENST00000393952 CDK15Q96Q40 435 aa23.49■■□□□ 1.35
LRFN4-202ENST00000393952 GMEB2Q9UKD1 530 aa23.49■■□□□ 1.35
LRFN4-202ENST00000393952 DFNA5O60443 496 aa23.48■■□□□ 1.35
LRFN4-202ENST00000393952 FAM107AO95990 144 aa23.48■■□□□ 1.35
LRFN4-202ENST00000393952 SHMT2P34897 504 aa23.48■■□□□ 1.35
LRFN4-202ENST00000393952 ARL1P40616 181 aaPredicted RBP23.48■■□□□ 1.35
LRFN4-202ENST00000393952 RPL14P50914 215 aaKnown RBP23.48■■□□□ 1.35
LRFN4-202ENST00000393952 CCNG1P51959 295 aa23.48■■□□□ 1.35
LRFN4-202ENST00000393952 PKNOX1P55347 436 aa23.48■■□□□ 1.35
LRFN4-202ENST00000393952 PLCL1Q15111 1095 aa23.48■■□□□ 1.35
LRFN4-202ENST00000393952 LAIR1Q6GTX8 287 aa23.48■■□□□ 1.35
LRFN4-202ENST00000393952 TCEAL6Q6IPX3 200 aa23.48■■□□□ 1.35
LRFN4-202ENST00000393952 AMIGO1Q86WK6 493 aa23.48■■□□□ 1.35
LRFN4-202ENST00000393952 KYQ8NBH2 561 aa23.48■■□□□ 1.35
LRFN4-202ENST00000393952 HMGCLL1Q8TB92 370 aa23.48■■□□□ 1.35
LRFN4-202ENST00000393952 PIWIL2Q8TC59 973 aaKnown RBP23.48■■□□□ 1.35
LRFN4-202ENST00000393952 SAP25Q8TEE9 199 aa23.48■■□□□ 1.35
LRFN4-202ENST00000393952 TCEAL3Q969E4 200 aa23.48■■□□□ 1.35
LRFN4-202ENST00000393952 ELAC2Q9BQ52 826 aaKnown RBP23.48■■□□□ 1.35
LRFN4-202ENST00000393952 NUSAP1Q9BXS6 441 aaKnown RBP23.48■■□□□ 1.35
LRFN4-202ENST00000393952 NPHS2Q9NP85 383 aa23.48■■□□□ 1.35
LRFN4-202ENST00000393952 SH2B3Q9UQQ2 575 aa23.48■■□□□ 1.35
LRFN4-202ENST00000393952 ARID1BQ8NFD5 2236 aaPredicted RBP23.48■■□□□ 1.35
LRFN4-202ENST00000393952 A0A1W2PPV9 198 aa23.48■■□□□ 1.35
LRFN4-202ENST00000393952 KATNA1O75449 491 aa23.48■■□□□ 1.35
LRFN4-202ENST00000393952 CER1O95813 267 aa23.48■■□□□ 1.35
LRFN4-202ENST00000393952 OTCP00480 354 aa23.48■■□□□ 1.35
LRFN4-202ENST00000393952 SYPP08247 313 aa23.48■■□□□ 1.35
LRFN4-202ENST00000393952 NPPBP16860 134 aa23.48■■□□□ 1.35
LRFN4-202ENST00000393952 ERVPABLB-1P60509 514 aa23.48■■□□□ 1.35
LRFN4-202ENST00000393952 C6orf132Q5T0Z8 1188 aa23.48■■□□□ 1.35
LRFN4-202ENST00000393952 CHCHD2P9Q5T1J5 151 aaPredicted RBP23.48■■□□□ 1.35
LRFN4-202ENST00000393952 THEMIS2Q5TEJ8 643 aa23.48■■□□□ 1.35
LRFN4-202ENST00000393952 PRAMEF13Q5VWM6 474 aa23.48■■□□□ 1.35
LRFN4-202ENST00000393952 LETMD1Q6P1Q0 360 aa23.48■■□□□ 1.35
LRFN4-202ENST00000393952 ZNF761Q86XN6 746 aaPredicted RBP23.48■■□□□ 1.35
LRFN4-202ENST00000393952 OR4F6Q8NGB9 312 aa23.48■■□□□ 1.35
LRFN4-202ENST00000393952 GTPBP2Q9BX10 602 aaKnown RBP23.48■■□□□ 1.35
LRFN4-202ENST00000393952 SRMSQ9H3Y6 488 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms