RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 LACC1Q8IV20 430 aa5.08□□□□□ -1.6
SNORA40.4-201ENST00000390971 DCLK2Q8N568 766 aa5.08□□□□□ -1.6
SNORA40.4-201ENST00000390971 THAP8Q8NA92 274 aa5.08□□□□□ -1.6
SNORA40.4-201ENST00000390971 OR13C3Q8NGS6 347 aa5.08□□□□□ -1.6
SNORA40.4-201ENST00000390971 THOC1Q96FV9 657 aaKnown RBP5.08□□□□□ -1.6
SNORA40.4-201ENST00000390971 SYT11Q9BT88 431 aa5.08□□□□□ -1.6
SNORA40.4-201ENST00000390971 CLEC7AQ9BXN2 247 aa5.08□□□□□ -1.6
SNORA40.4-201ENST00000390971 FAM49AQ9H0Q0 323 aaPredicted RBP5.08□□□□□ -1.6
SNORA40.4-201ENST00000390971 STUB1Q9UNE7 303 aa5.08□□□□□ -1.6
SNORA40.4-201ENST00000390971 IGLV7-46A0A075B6I9 117 aa5.07□□□□□ -1.6
SNORA40.4-201ENST00000390971 A0A0J9YWU9 116 aa5.07□□□□□ -1.6
SNORA40.4-201ENST00000390971 EPHB6O15197 1021 aa5.07□□□□□ -1.6
SNORA40.4-201ENST00000390971 GLRA3O75311 464 aa5.07□□□□□ -1.6
SNORA40.4-201ENST00000390971 RAB40ALP0C0E4 278 aa5.07□□□□□ -1.6
SNORA40.4-201ENST00000390971 CSTF2P33240 577 aaKnown RBP eCLIP5.07□□□□□ -1.6
SNORA40.4-201ENST00000390971 CCR3P51677 355 aa5.07□□□□□ -1.6
SNORA40.4-201ENST00000390971 SQLEQ14534 574 aa5.07□□□□□ -1.6
SNORA40.4-201ENST00000390971 IL11RAQ14626 422 aa5.07□□□□□ -1.6
SNORA40.4-201ENST00000390971 UGT3A2Q3SY77 523 aa5.07□□□□□ -1.6
SNORA40.4-201ENST00000390971 XKR6Q5GH73 641 aa5.07□□□□□ -1.6
SNORA40.4-201ENST00000390971 SLC35D3Q5M8T2 416 aa5.07□□□□□ -1.6
SNORA40.4-201ENST00000390971 LCN1P1Q5VSP4 162 aa5.07□□□□□ -1.6
SNORA40.4-201ENST00000390971 PRR27Q6MZM9 219 aa5.07□□□□□ -1.6
SNORA40.4-201ENST00000390971 PRPF39Q86UA1 669 aaKnown RBP5.07□□□□□ -1.6
SNORA40.4-201ENST00000390971 HOGA1Q86XE5 327 aa5.07□□□□□ -1.6
SNORA40.4-201ENST00000390971 POGLUT1Q8NBL1 392 aa5.07□□□□□ -1.6
SNORA40.4-201ENST00000390971 TEKT4Q8WW24 435 aa5.07□□□□□ -1.6
SNORA40.4-201ENST00000390971 ARSGQ96EG1 525 aa5.07□□□□□ -1.6
SNORA40.4-201ENST00000390971 FGFBP2Q9BYJ0 223 aa5.07□□□□□ -1.6
SNORA40.4-201ENST00000390971 FAM207AQ9NSI2 230 aaPredicted RBP5.07□□□□□ -1.6
SNORA40.4-201ENST00000390971 EPHA6Q9UF33 1036 aa5.07□□□□□ -1.6
SNORA40.4-201ENST00000390971 FAM169AQ9Y6X4 670 aa5.07□□□□□ -1.6
SNORA40.4-201ENST00000390971 CDK2AP2O75956 126 aa5.06□□□□□ -1.6
SNORA40.4-201ENST00000390971 HAPLN1P10915 354 aaPredicted RBP5.06□□□□□ -1.6
SNORA40.4-201ENST00000390971 TAF6P49848 677 aa5.06□□□□□ -1.6
SNORA40.4-201ENST00000390971 ALDH3A2P51648 485 aa5.06□□□□□ -1.6
SNORA40.4-201ENST00000390971 HNRNPKP61978 463 aaKnown RBP eCLIP5.06□□□□□ -1.6
SNORA40.4-201ENST00000390971 SNTB1Q13884 538 aaKnown RBP5.06□□□□□ -1.6
SNORA40.4-201ENST00000390971 PTPRCAPQ14761 206 aa5.06□□□□□ -1.6
SNORA40.4-201ENST00000390971 TNIP1Q15025 636 aa5.06□□□□□ -1.6
SNORA40.4-201ENST00000390971 HERC3Q15034 1050 aa5.06□□□□□ -1.6
SNORA40.4-201ENST00000390971 HLA-BQ31612 363 aa5.06□□□□□ -1.6
SNORA40.4-201ENST00000390971 WLSQ5T9L3 541 aa5.06□□□□□ -1.6
SNORA40.4-201ENST00000390971 METTL7BQ6UX53 244 aa5.06□□□□□ -1.6
SNORA40.4-201ENST00000390971 ENOSF1Q7L5Y1 443 aa5.06□□□□□ -1.6
SNORA40.4-201ENST00000390971 G2E3Q7L622 706 aa5.06□□□□□ -1.6
SNORA40.4-201ENST00000390971 TC2NQ8N9U0 490 aa5.06□□□□□ -1.6
SNORA40.4-201ENST00000390971 OR10G8Q8NGN5 311 aa5.06□□□□□ -1.6
SNORA40.4-201ENST00000390971 ZNF689Q96CS4 500 aaPredicted RBP5.06□□□□□ -1.6
SNORA40.4-201ENST00000390971 FAM20AQ96MK3 541 aa5.06□□□□□ -1.6
SNORA40.4-201ENST00000390971 KRT12Q99456 494 aa5.06□□□□□ -1.6
SNORA40.4-201ENST00000390971 MTMR12Q9C0I1 747 aa5.06□□□□□ -1.6
SNORA40.4-201ENST00000390971 GPR88Q9GZN0 384 aa5.06□□□□□ -1.6
SNORA40.4-201ENST00000390971 MYNNQ9NPC7 610 aa5.06□□□□□ -1.6
SNORA40.4-201ENST00000390971 ERAP1Q9NZ08 941 aa5.06□□□□□ -1.6
SNORA40.4-201ENST00000390971 TNNQ9UQP3 1299 aa5.06□□□□□ -1.6
SNORA40.4-201ENST00000390971 TRPV2Q9Y5S1 764 aa5.06□□□□□ -1.6
SNORA40.4-201ENST00000390971 EDDM13A0A1B0GTR0 161 aa5.05□□□□□ -1.6
SNORA40.4-201ENST00000390971 SYNDIG1LA6NDD5 238 aa5.05□□□□□ -1.6
SNORA40.4-201ENST00000390971 NXPH2O95156 264 aa5.05□□□□□ -1.6
SNORA40.4-201ENST00000390971 MPZP25189 248 aa5.05□□□□□ -1.6
SNORA40.4-201ENST00000390971 CCR10P46092 362 aa5.05□□□□□ -1.6
SNORA40.4-201ENST00000390971 MAPK12P53778 367 aa5.05□□□□□ -1.6
SNORA40.4-201ENST00000390971 KLC1Q07866 573 aa5.05□□□□□ -1.6
SNORA40.4-201ENST00000390971 ALCAMQ13740 583 aa5.05□□□□□ -1.6
SNORA40.4-201ENST00000390971 BECN1Q14457 450 aa5.05□□□□□ -1.6
SNORA40.4-201ENST00000390971 SLC25A53Q5H9E4 307 aa5.05□□□□□ -1.6
SNORA40.4-201ENST00000390971 ZNF613Q6PF04 617 aa5.05□□□□□ -1.6
SNORA40.4-201ENST00000390971 FIP1L1Q6UN15 594 aaKnown RBP5.05□□□□□ -1.6
SNORA40.4-201ENST00000390971 NUP54Q7Z3B4 507 aa5.05□□□□□ -1.6
SNORA40.4-201ENST00000390971 PTAR1Q7Z6K3 402 aaPredicted RBP5.05□□□□□ -1.6
SNORA40.4-201ENST00000390971 ZNF440Q8IYI8 595 aa5.05□□□□□ -1.6
SNORA40.4-201ENST00000390971 SHARPINQ9H0F6 387 aa5.05□□□□□ -1.6
SNORA40.4-201ENST00000390971 CPSF3Q9UKF6 684 aaKnown RBP5.05□□□□□ -1.6
SNORA40.4-201ENST00000390971 KRTAP16-1A8MUX0 517 aa5.04□□□□□ -1.6
SNORA40.4-201ENST00000390971 SORBS2O94875 1100 aaKnown RBP5.04□□□□□ -1.6
SNORA40.4-201ENST00000390971 C22orf31O95567 290 aa5.04□□□□□ -1.6
SNORA40.4-201ENST00000390971 PCGF2P35227 344 aa5.04□□□□□ -1.6
SNORA40.4-201ENST00000390971 ASCL1P50553 236 aa5.04□□□□□ -1.6
SNORA40.4-201ENST00000390971 PAX9P55771 341 aa5.04□□□□□ -1.6
SNORA40.4-201ENST00000390971 PHKG1Q16816 387 aa5.04□□□□□ -1.6
SNORA40.4-201ENST00000390971 UGP2Q16851 508 aa5.04□□□□□ -1.6
SNORA40.4-201ENST00000390971 LETM2Q2VYF4 491 aa5.04□□□□□ -1.6
SNORA40.4-201ENST00000390971 MCMDC2Q4G0Z9 681 aa5.04□□□□□ -1.6
SNORA40.4-201ENST00000390971 C9orf152Q5JTZ5 239 aa5.04□□□□□ -1.6
SNORA40.4-201ENST00000390971 BSPRYQ5W0U4 402 aa5.04□□□□□ -1.6
SNORA40.4-201ENST00000390971 TMEM207Q6UWW9 146 aa5.04□□□□□ -1.6
SNORA40.4-201ENST00000390971 LGI2Q8N0V4 545 aa5.04□□□□□ -1.6
SNORA40.4-201ENST00000390971 NDUFAF2Q8N183 169 aa5.04□□□□□ -1.6
SNORA40.4-201ENST00000390971 BMPERQ8N8U9 685 aa5.04□□□□□ -1.6
SNORA40.4-201ENST00000390971 GPRC5AQ8NFJ5 357 aa5.04□□□□□ -1.6
SNORA40.4-201ENST00000390971 AZIN2Q96A70 460 aa5.04□□□□□ -1.6
SNORA40.4-201ENST00000390971 C10orf90Q96M02 699 aa5.04□□□□□ -1.6
SNORA40.4-201ENST00000390971 AGAP3Q96P47 875 aa5.04□□□□□ -1.6
SNORA40.4-201ENST00000390971 CNOT10Q9H9A5 744 aaKnown RBP5.04□□□□□ -1.6
SNORA40.4-201ENST00000390971 C19orf25Q9UFG5 118 aaPredicted RBP5.04□□□□□ -1.6
SNORA40.4-201ENST00000390971 ASIC3Q9UHC3 531 aa5.04□□□□□ -1.6
SNORA40.4-201ENST00000390971 MAN1B1Q9UKM7 699 aa5.04□□□□□ -1.6
SNORA40.4-201ENST00000390971 TMED3Q9Y3Q3 217 aa5.04□□□□□ -1.6
SNORA40.4-201ENST00000390971 MMP24Q9Y5R2 645 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms