RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 CKMP06732 381 aa13.94□□□□□ -0.18
RTF1-201ENST00000389629 TACR2P21452 398 aa13.94□□□□□ -0.18
RTF1-201ENST00000389629 GABRB3P28472 473 aa13.94□□□□□ -0.18
RTF1-201ENST00000389629 SHMT2P34897 504 aa13.94□□□□□ -0.18
RTF1-201ENST00000389629 ZNF33AQ06730 810 aa13.94□□□□□ -0.18
RTF1-201ENST00000389629 DSC3Q14574 896 aa13.94□□□□□ -0.18
RTF1-201ENST00000389629 OR4D1Q15615 310 aa13.94□□□□□ -0.18
RTF1-201ENST00000389629 SYVN1Q86TM6 617 aa13.94□□□□□ -0.18
RTF1-201ENST00000389629 PEX5LQ8IYB4 626 aa13.94□□□□□ -0.18
RTF1-201ENST00000389629 OR10G2Q8NGC3 310 aa13.94□□□□□ -0.18
RTF1-201ENST00000389629 TADA1Q96BN2 335 aa13.94□□□□□ -0.18
RTF1-201ENST00000389629 AASDHPPTQ9NRN7 309 aa13.94□□□□□ -0.18
RTF1-201ENST00000389629 THUMPD1Q9NXG2 353 aaKnown RBP13.94□□□□□ -0.18
RTF1-201ENST00000389629 MAP4K5Q9Y4K4 846 aa13.94□□□□□ -0.18
RTF1-201ENST00000389629 ADAMDEC1O15204 470 aa13.94□□□□□ -0.18
RTF1-201ENST00000389629 CLDN9O95484 217 aa13.94□□□□□ -0.18
RTF1-201ENST00000389629 KCNE1P15382 129 aa13.94□□□□□ -0.18
RTF1-201ENST00000389629 GPX3P22352 226 aa13.94□□□□□ -0.18
RTF1-201ENST00000389629 STC1P52823 247 aa13.94□□□□□ -0.18
RTF1-201ENST00000389629 SNRPD2P62316 118 aaKnown RBP13.94□□□□□ -0.18
RTF1-201ENST00000389629 ZNF267Q14586 743 aaPredicted RBP13.94□□□□□ -0.18
RTF1-201ENST00000389629 BTBD16Q32M84 506 aa13.94□□□□□ -0.18
RTF1-201ENST00000389629 VN1R5Q7Z5H4 357 aa13.94□□□□□ -0.18
RTF1-201ENST00000389629 RETREG3Q86VR2 466 aa13.94□□□□□ -0.18
RTF1-201ENST00000389629 IZUMO1Q8IYV9 350 aa13.94□□□□□ -0.18
RTF1-201ENST00000389629 KHSRPQ92945 711 aaKnown RBP eCLIP13.94□□□□□ -0.18
RTF1-201ENST00000389629 TMEM159Q96B96 161 aa13.94□□□□□ -0.18
RTF1-201ENST00000389629 FRMD6Q96NE9 622 aa13.94□□□□□ -0.18
RTF1-201ENST00000389629 RDH12Q96NR8 316 aa13.94□□□□□ -0.18
RTF1-201ENST00000389629 DNMT3LQ9UJW3 386 aa13.94□□□□□ -0.18
RTF1-201ENST00000389629 CLCA2Q9UQC9 943 aa13.94□□□□□ -0.18
RTF1-201ENST00000389629 ALDH2P05091 517 aa13.94□□□□□ -0.18
RTF1-201ENST00000389629 HOXB6P17509 224 aaKnown RBP13.94□□□□□ -0.18
RTF1-201ENST00000389629 HMBOX1Q6NT76 420 aa13.94□□□□□ -0.18
RTF1-201ENST00000389629 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.94□□□□□ -0.18
RTF1-201ENST00000389629 LAPTM4BQ86VI4 370 aa13.94□□□□□ -0.18
RTF1-201ENST00000389629 AMIGO1Q86WK6 493 aa13.94□□□□□ -0.18
RTF1-201ENST00000389629 CADM3Q8N126 398 aa13.94□□□□□ -0.18
RTF1-201ENST00000389629 AIG1Q9NVV5 245 aa13.94□□□□□ -0.18
RTF1-201ENST00000389629 POLR3BQ9NW08 1133 aaPredicted RBP13.94□□□□□ -0.18
RTF1-201ENST00000389629 USP22Q9UPT9 525 aa13.94□□□□□ -0.18
RTF1-201ENST00000389629 RWDD3Q9Y3V2 267 aa13.94□□□□□ -0.18
RTF1-201ENST00000389629 INSIG1O15503 277 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 FFAR2O15552 330 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 CD40LGP29965 261 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 CAMK2GQ13555 558 aaPredicted RBP13.93□□□□□ -0.18
RTF1-201ENST00000389629 OR4F3Q6IEY1 312 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 FBXL22Q6P050 247 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 PHC2Q8IXK0 858 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 DTWD1Q8N5C7 304 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 GLB1L3Q8NCI6 653 aaPredicted RBP13.93□□□□□ -0.18
RTF1-201ENST00000389629 CAMKK2Q96RR4 588 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 TBC1D17Q9HA65 648 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 LCHNA4D1U4 455 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 PRLP01236 227 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 ASB18Q6ZVZ8 466 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 LARP4Q71RC2 724 aaKnown RBP eCLIP13.93□□□□□ -0.18
RTF1-201ENST00000389629 GALNT10Q86SR1 603 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 C11orf65Q8NCR3 313 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 ANKRA2Q9H9E1 313 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 DIABLOQ9NR28 239 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 EVLQ9UI08 416 aaPredicted RBP13.93□□□□□ -0.18
RTF1-201ENST00000389629 STOML2Q9UJZ1 356 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 ANGPT4Q9Y264 503 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 FADS2P1A8MWK0 482 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 CLIC1O00299 241 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 SLITRK5O94991 958 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 DNTTP04053 509 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 FPR1P21462 350 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 SCAPQ12770 1279 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 CYBRD1Q53TN4 286 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 FAM117BQ6P1L5 589 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 UBE2R2Q712K3 238 aaPredicted RBP13.93□□□□□ -0.18
RTF1-201ENST00000389629 PTERQ96BW5 349 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 DERL2Q9GZP9 239 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 TRIT1Q9H3H1 467 aaKnown RBP13.93□□□□□ -0.18
RTF1-201ENST00000389629 CORINQ9Y5Q5 1042 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 SMCHD1A6NHR9 2005 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 A0A0G2JLL6 359 aaPredicted RBP13.93□□□□□ -0.18
RTF1-201ENST00000389629 H7C4K7 107 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 PRAMEF1O95521 474 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 SLC2A2P11168 524 aaPredicted RBP13.93□□□□□ -0.18
RTF1-201ENST00000389629 CRHBPP24387 322 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 APLP1P51693 650 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 PKDCCQ504Y2 493 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 SNAP47Q5SQN1 464 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 PRRT2Q7Z6L0 340 aaPredicted RBP13.93□□□□□ -0.18
RTF1-201ENST00000389629 ZNF614Q8N883 585 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 RPL3LQ92901 407 aaKnown RBP13.93□□□□□ -0.18
RTF1-201ENST00000389629 TMEM125Q96AQ2 219 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 B3GNT3Q9Y2A9 372 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 IFT52Q9Y366 437 aa13.93□□□□□ -0.18
RTF1-201ENST00000389629 ESR1P03372 595 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 HTR1BP28222 390 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 FAM214AQ32MH5 1076 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 IQCCQ4KMZ1 466 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 LGI4Q8N135 537 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 DPP10Q8N608 796 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 ZNF675Q8TD23 568 aa13.92□□□□□ -0.18
RTF1-201ENST00000389629 TSPEARQ8WU66 669 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms