RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 MT-ND2P03891 347 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 DNTTP04053 509 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 ASGR1P07306 291 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 FGFR1P11362 822 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 IL7RP16871 459 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 CYP2A7P20853 494 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 HOXA10P31260 410 aaPredicted RBP4.79□□□□□ -1.64
PTPRD-203ENST00000381196 ERVK-8P63133 956 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 LIPEQ05469 1076 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 DDX39BQ13838 428 aaKnown RBP4.79□□□□□ -1.64
PTPRD-203ENST00000381196 MSS51Q4VC12 460 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 RAB11FIP2Q7L804 512 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 RNF113BQ8IZP6 322 aaKnown RBP4.79□□□□□ -1.64
PTPRD-203ENST00000381196 CLDN22Q8N7P3 220 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 OR5J2Q8NH18 312 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 TMEM159Q96B96 161 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 C12orf43Q96C57 262 aaKnown RBP4.79□□□□□ -1.64
PTPRD-203ENST00000381196 ZDHHC12Q96GR4 267 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 ZNF285Q96NJ3 590 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 MED18Q9BUE0 208 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 CERS4Q9HA82 394 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.79□□□□□ -1.64
PTPRD-203ENST00000381196 POLR3BQ9NW08 1133 aaPredicted RBP4.79□□□□□ -1.64
PTPRD-203ENST00000381196 SNTG2Q9NY99 539 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 NDRG2Q9UN36 371 aaKnown RBP4.79□□□□□ -1.64
PTPRD-203ENST00000381196 BTAF1O14981 1849 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 PATJQ8NI35 1801 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 ARRDC5A6NEK1 342 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 DDTLA6NHG4 134 aaPredicted RBP4.79□□□□□ -1.64
PTPRD-203ENST00000381196 EFCAB7A8K855 629 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 PRODHO43272 600 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 INHAP05111 366 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 CFIP05156 583 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 ZSCAN5DPP0CG00 497 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 CBSLP0DN79 551 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 RRM1P23921 792 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 CBSP35520 551 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 DSTNP60981 165 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 RAP2BP61225 183 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 NFATC3Q12968 1075 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 ASAH1Q13510 395 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 SEMA5AQ13591 1074 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 OXA1LQ15070 435 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 IQCCQ4KMZ1 466 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 VSTM1Q6UX27 236 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 MON1BQ7L1V2 547 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 ACOT1Q86TX2 421 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 BEST4Q8NFU0 473 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 OR52E4Q8NGH9 312 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 VANGL1Q8TAA9 524 aaPredicted RBP4.79□□□□□ -1.64
PTPRD-203ENST00000381196 SCP2D1Q9UJQ7 156 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 CNTN6Q9UQ52 1028 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 TSPAN3O60637 253 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 SPARCP09486 303 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 GPC1P35052 558 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 TAS2R31P59538 309 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 FUT2Q10981 343 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 LY6KQ17RY6 165 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 SGO1Q5FBB7 561 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 LPCAT4Q643R3 524 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 KIAA1211LQ6NV74 962 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 TRMT11Q7Z4G4 463 aaKnown RBP4.78□□□□□ -1.64
PTPRD-203ENST00000381196 NOXA1Q86UR1 476 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 VWA5B2Q8N398 1253 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 GEMIN6Q8WXD5 167 aaKnown RBP4.78□□□□□ -1.64
PTPRD-203ENST00000381196 DHRS1Q96LJ7 313 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 DCSTAMPQ9H295 470 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 ABCB10Q9NRK6 738 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 GFOD1Q9NXC2 390 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 POMT1Q9Y6A1 747 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 PTCH2Q9Y6C5 1203 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 NRCAMQ92823 1304 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 LRRC72A6NJI9 287 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 MSH4O15457 936 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 RAD1O60671 282 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 ZMPSTE24O75844 475 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 STAU1O95793 577 aaKnown RBP4.78□□□□□ -1.64
PTPRD-203ENST00000381196 GNSP15586 552 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 CALCRP30988 508 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 CHRNEQ04844 493 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 BTKQ06187 659 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 PYDC2Q56P42 97 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 SH3PXD2AQ5TCZ1 1133 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 HIST2H3AQ71DI3 136 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 LAPTM4BQ86VI4 370 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 RNF130Q86XS8 419 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.78□□□□□ -1.64
PTPRD-203ENST00000381196 ARL6IP6Q8N6S5 226 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 RHEBL1Q8TAI7 183 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 UBA3Q8TBC4 463 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 SLC25A36Q96CQ1 311 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 TRNT1Q96Q11 434 aaKnown RBP4.78□□□□□ -1.64
PTPRD-203ENST00000381196 EPYCQ99645 322 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 DOK1Q99704 481 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 OCSTAMPQ9BR26 566 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 BTBD1Q9H0C5 482 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 GLOD4Q9HC38 313 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 LRRC4CQ9HCJ2 640 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 TRIM36Q9NQ86 728 aa4.78□□□□□ -1.64
PTPRD-203ENST00000381196 RNF6Q9Y252 685 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms