RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 CPT1BQ92523 772 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 MAGOHBQ96A72 148 aaKnown RBP4.48□□□□□ -1.69
C9orf72-203ENST00000380003 ZNF669Q96BR6 464 aaPredicted RBP4.48□□□□□ -1.69
C9orf72-203ENST00000380003 CNDP1Q96KN2 507 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 SRPK1Q96SB4 655 aaKnown RBP4.48□□□□□ -1.69
C9orf72-203ENST00000380003 ZPBPQ9BS86 351 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 UCK1Q9HA47 277 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 CASS4Q9NQ75 786 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 UTP6Q9NYH9 597 aaKnown RBP4.48□□□□□ -1.69
C9orf72-203ENST00000380003 PKDREJQ9NTG1 2253 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 SHANK1Q9Y566 2161 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 BLACEA4D250 179 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 H7C0S8 307 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 TOX3O15405 576 aaPredicted RBP4.48□□□□□ -1.69
C9orf72-203ENST00000380003 RFPL1O75677 317 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 HAUS5O94927 633 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 SLC16A8O95907 504 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 UMODP07911 640 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 ITGA3P26006 1051 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 LAMB3Q13751 1172 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 DHX34Q14147 1143 aaKnown RBP4.48□□□□□ -1.69
C9orf72-203ENST00000380003 PLEKHN1Q494U1 663 aaPredicted RBP4.48□□□□□ -1.69
C9orf72-203ENST00000380003 MSS51Q4VC12 460 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 FCRL6Q6DN72 434 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 ZNF517Q6ZMY9 492 aaPredicted RBP4.48□□□□□ -1.69
C9orf72-203ENST00000380003 PIWIL4Q7Z3Z4 852 aaKnown RBP4.48□□□□□ -1.69
C9orf72-203ENST00000380003 IGDCC3Q8IVU1 814 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 REXO1L1PQ8IX06 675 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 SLC35F6Q8N357 371 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 SPATA6LQ8N4H0 392 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 Q8NA96 180 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 CATSPER1Q8NEC5 780 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 PPHLN1Q8NEY8 458 aaKnown RBP4.48□□□□□ -1.69
C9orf72-203ENST00000380003 DENND1AQ8TEH3 1009 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 ULK4Q96C45 1275 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 WBP1Q96G27 269 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 NLNQ9BYT8 704 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 PITPNM3Q9BZ71 974 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 ATG10Q9H0Y0 220 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 EPB41L1Q9H4G0 881 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 SLAMF7Q9NQ25 335 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 PPANQ9NQ55 473 aaKnown RBP4.48□□□□□ -1.69
C9orf72-203ENST00000380003 TXLNGQ9NUQ3 528 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 ASF1BQ9NVP2 202 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 P4HTMQ9NXG6 502 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 PLA2G3Q9NZ20 509 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 SH2B3Q9UQQ2 575 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 MRPS2Q9Y399 296 aaKnown RBP4.48□□□□□ -1.69
C9orf72-203ENST00000380003 OTOGQ6ZRI0 2925 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 IGKV1-8A0A0C4DH67 115 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 C17orf113A0A1B0GUU1 675 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 FEZF1A0PJY2 475 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 ZNF860A6NHJ4 632 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 H3BMH7 237 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 H7BY64 318 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 PRMT5O14744 637 aaPredicted RBP4.48□□□□□ -1.69
C9orf72-203ENST00000380003 DNAJB6O75190 326 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 GAS8O95995 478 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 KRT14P02533 472 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 FTH1P02794 183 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 AOAHP28039 575 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 HNF4AP41235 474 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 RAB28P51157 221 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 EFNA3P52797 238 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 ZNF460Q14592 562 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 NKAIN1Q4KMZ8 207 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 WASHC2DQ5SRD0 308 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 FCRLBQ6BAA4 426 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 CCDC137Q6PK04 289 aaKnown RBP4.48□□□□□ -1.69
C9orf72-203ENST00000380003 AFTPHQ6ULP2 937 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 LINC00523Q86TU6 105 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 MCATQ8IVS2 390 aaKnown RBP4.48□□□□□ -1.69
C9orf72-203ENST00000380003 KLHL7Q8IXQ5 586 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 CPNE9Q8IYJ1 553 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 SIRT6Q8N6T7 355 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 GSDMBQ8TAX9 411 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 ASZ1Q8WWH4 475 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 DLG3Q92796 817 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 SNRNP40Q96DI7 357 aaKnown RBP4.48□□□□□ -1.69
C9orf72-203ENST00000380003 PRAP1Q96NZ9 151 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 GBP5Q96PP8 586 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 DPH7Q9BTV6 452 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 KCNF1Q9H3M0 494 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 TFB2MQ9H5Q4 396 aaKnown RBP4.48□□□□□ -1.69
C9orf72-203ENST00000380003 VPS37BQ9H9H4 285 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 TREX1Q9NSU2 369 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 CUEDC1Q9NWM3 386 aaPredicted RBP4.48□□□□□ -1.69
C9orf72-203ENST00000380003 EURLQ9NYK6 297 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 TAC3Q9UHF0 121 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 SH3BGRL2Q9UJC5 107 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 MED16Q9Y2X0 877 aa4.48□□□□□ -1.69
C9orf72-203ENST00000380003 CTAGE9A4FU28 777 aa4.47□□□□□ -1.69
C9orf72-203ENST00000380003 ARHGEF33A8MVX0 844 aa4.47□□□□□ -1.69
C9orf72-203ENST00000380003 E5RI56 91 aa4.47□□□□□ -1.69
C9orf72-203ENST00000380003 LIN7AO14910 233 aaPredicted RBP4.47□□□□□ -1.69
C9orf72-203ENST00000380003 FANCGO15287 622 aa4.47□□□□□ -1.69
C9orf72-203ENST00000380003 GPC4O75487 556 aa4.47□□□□□ -1.69
C9orf72-203ENST00000380003 AGFG2O95081 481 aa4.47□□□□□ -1.69
C9orf72-203ENST00000380003 C1orf105O95561 183 aa4.47□□□□□ -1.69
C9orf72-203ENST00000380003 APOA4P06727 396 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms