RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 FGF5P12034 268 aa13.35□□□□□ -0.27
PRPF18-202ENST00000378572 CD151P48509 253 aa13.35□□□□□ -0.27
PRPF18-202ENST00000378572 MAGOHP61326 146 aaKnown RBP13.35□□□□□ -0.27
PRPF18-202ENST00000378572 CACNG1Q06432 222 aa13.35□□□□□ -0.27
PRPF18-202ENST00000378572 CTBP1Q13363 440 aa13.35□□□□□ -0.27
PRPF18-202ENST00000378572 GPR33Q49SQ1 333 aa13.35□□□□□ -0.27
PRPF18-202ENST00000378572 DUS1LQ6P1R4 473 aaKnown RBP13.35□□□□□ -0.27
PRPF18-202ENST00000378572 FAM83HQ6ZRV2 1179 aaPredicted RBP13.35□□□□□ -0.27
PRPF18-202ENST00000378572 C11orf96Q7Z7L8 435 aa13.35□□□□□ -0.27
PRPF18-202ENST00000378572 EXOC3L1Q86VI1 746 aa13.35□□□□□ -0.27
PRPF18-202ENST00000378572 ZC3HC1Q86WB0 502 aaKnown RBP13.35□□□□□ -0.27
PRPF18-202ENST00000378572 OOSP2Q86WS3 158 aa13.35□□□□□ -0.27
PRPF18-202ENST00000378572 BEND7Q8N7W2 519 aaPredicted RBP13.35□□□□□ -0.27
PRPF18-202ENST00000378572 DDHD1Q8NEL9 900 aa13.35□□□□□ -0.27
PRPF18-202ENST00000378572 KLHL6Q8WZ60 621 aa13.35□□□□□ -0.27
PRPF18-202ENST00000378572 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.35□□□□□ -0.27
PRPF18-202ENST00000378572 C12orf66Q96MD2 445 aa13.35□□□□□ -0.27
PRPF18-202ENST00000378572 WWP1Q9H0M0 922 aa13.35□□□□□ -0.27
PRPF18-202ENST00000378572 INTS10Q9NVR2 710 aaKnown RBP13.35□□□□□ -0.27
PRPF18-202ENST00000378572 MARCH4Q9P2E8 410 aaPredicted RBP13.35□□□□□ -0.27
PRPF18-202ENST00000378572 VPS9D1Q9Y2B5 631 aa13.35□□□□□ -0.27
PRPF18-202ENST00000378572 PTPN13Q12923 2485 aa13.34□□□□□ -0.27
PRPF18-202ENST00000378572 IGHV5-51A0A0C4DH38 117 aa13.34□□□□□ -0.27
PRPF18-202ENST00000378572 TRBV5-4A0A0C4DH59 114 aa13.34□□□□□ -0.27
PRPF18-202ENST00000378572 OR51F1A6NGY5 319 aa13.34□□□□□ -0.27
PRPF18-202ENST00000378572 TRIM49D1C9J1S8 452 aa13.34□□□□□ -0.27
PRPF18-202ENST00000378572 GAPDHSO14556 408 aaPredicted RBP13.34□□□□□ -0.27
PRPF18-202ENST00000378572 PFDN6O15212 129 aa13.34□□□□□ -0.27
PRPF18-202ENST00000378572 CREG1O75629 220 aa13.34□□□□□ -0.27
PRPF18-202ENST00000378572 SRP72O76094 671 aaKnown RBP13.34□□□□□ -0.27
PRPF18-202ENST00000378572 NTRK1P04629 796 aa13.34□□□□□ -0.27
PRPF18-202ENST00000378572 MTHFD1P11586 935 aaKnown RBP13.34□□□□□ -0.27
PRPF18-202ENST00000378572 ITGALP20701 1170 aa13.34□□□□□ -0.27
PRPF18-202ENST00000378572 GABRB3P28472 473 aa13.34□□□□□ -0.27
PRPF18-202ENST00000378572 TTPAP49638 278 aa13.34□□□□□ -0.27
PRPF18-202ENST00000378572 FOXK1P85037 733 aa13.34□□□□□ -0.27
PRPF18-202ENST00000378572 ACY1Q03154 408 aa13.34□□□□□ -0.27
PRPF18-202ENST00000378572 CRTC2Q53ET0 693 aaPredicted RBP13.34□□□□□ -0.27
PRPF18-202ENST00000378572 RNF187Q5TA31 235 aaPredicted RBP13.34□□□□□ -0.27
PRPF18-202ENST00000378572 CERS6Q6ZMG9 384 aa13.34□□□□□ -0.27
PRPF18-202ENST00000378572 ASB18Q6ZVZ8 466 aa13.34□□□□□ -0.27
PRPF18-202ENST00000378572 SNX20Q7Z614 316 aa13.34□□□□□ -0.27
PRPF18-202ENST00000378572 ATCAYQ86WG3 371 aa13.34□□□□□ -0.27
PRPF18-202ENST00000378572 OTUD6BQ8N6M0 293 aa13.34□□□□□ -0.27
PRPF18-202ENST00000378572 ACMSDQ8TDX5 336 aa13.34□□□□□ -0.27
PRPF18-202ENST00000378572 ALKBH8Q96BT7 664 aaKnown RBP13.34□□□□□ -0.27
PRPF18-202ENST00000378572 VPS39Q96JC1 886 aa13.34□□□□□ -0.27
PRPF18-202ENST00000378572 GPR22Q99680 433 aa13.34□□□□□ -0.27
PRPF18-202ENST00000378572 MAP3K3Q99759 626 aa13.34□□□□□ -0.27
PRPF18-202ENST00000378572 ACTL8Q9H568 366 aa13.34□□□□□ -0.27
PRPF18-202ENST00000378572 SSU72Q9NP77 194 aaKnown RBP13.34□□□□□ -0.27
PRPF18-202ENST00000378572 LHX9Q9NQ69 397 aa13.34□□□□□ -0.27
PRPF18-202ENST00000378572 EPHA6Q9UF33 1036 aa13.34□□□□□ -0.27
PRPF18-202ENST00000378572 TIAF1O95411 115 aa13.33□□□□□ -0.27
PRPF18-202ENST00000378572 S1PR4O95977 384 aa13.33□□□□□ -0.27
PRPF18-202ENST00000378572 FURINP09958 794 aa13.33□□□□□ -0.27
PRPF18-202ENST00000378572 FOLR1P15328 257 aa13.33□□□□□ -0.27
PRPF18-202ENST00000378572 PPARGP37231 505 aaPredicted RBP13.33□□□□□ -0.27
PRPF18-202ENST00000378572 MAGEA12P43365 314 aa13.33□□□□□ -0.27
PRPF18-202ENST00000378572 MPP1Q00013 466 aa13.33□□□□□ -0.27
PRPF18-202ENST00000378572 DMPKQ09013 629 aa13.33□□□□□ -0.27
PRPF18-202ENST00000378572 PWWP2BQ6NUJ5 590 aa13.33□□□□□ -0.27
PRPF18-202ENST00000378572 TMEM126BQ8IUX1 230 aa13.33□□□□□ -0.27
PRPF18-202ENST00000378572 NAT14Q8WUY8 206 aa13.33□□□□□ -0.27
PRPF18-202ENST00000378572 DCUN1D1Q96GG9 259 aa13.33□□□□□ -0.27
PRPF18-202ENST00000378572 FGF21Q9NSA1 209 aa13.33□□□□□ -0.27
PRPF18-202ENST00000378572 HRASLS2Q9NWW9 162 aa13.33□□□□□ -0.27
PRPF18-202ENST00000378572 CRLS1Q9UJA2 301 aa13.33□□□□□ -0.27
PRPF18-202ENST00000378572 OR5K3A6NET4 321 aa13.33□□□□□ -0.28
PRPF18-202ENST00000378572 TLCD2A6NGC4 264 aa13.33□□□□□ -0.28
PRPF18-202ENST00000378572 C21orf140B9A014 251 aa13.33□□□□□ -0.28
PRPF18-202ENST00000378572 CCNFP41002 786 aa13.33□□□□□ -0.28
PRPF18-202ENST00000378572 ADARP55265 1226 aaKnown RBP13.33□□□□□ -0.28
PRPF18-202ENST00000378572 RPS15P62841 145 aaKnown RBP13.33□□□□□ -0.28
PRPF18-202ENST00000378572 SLC18A2Q05940 514 aa13.33□□□□□ -0.28
PRPF18-202ENST00000378572 BMPR2Q13873 1038 aa13.33□□□□□ -0.28
PRPF18-202ENST00000378572 UBAP2LQ14157 1087 aaKnown RBP13.33□□□□□ -0.28
PRPF18-202ENST00000378572 SEMA3AQ14563 771 aa13.33□□□□□ -0.28
PRPF18-202ENST00000378572 TMTC4Q5T4D3 741 aa13.33□□□□□ -0.28
PRPF18-202ENST00000378572 MROH9Q5TGP6 573 aa13.33□□□□□ -0.28
PRPF18-202ENST00000378572 LYPLAL1Q5VWZ2 237 aa13.33□□□□□ -0.28
PRPF18-202ENST00000378572 SH2D5Q6ZV89 423 aa13.33□□□□□ -0.28
PRPF18-202ENST00000378572 SRRM1Q8IYB3 904 aaKnown RBP13.33□□□□□ -0.28
PRPF18-202ENST00000378572 ARFGAP2Q8N6H7 521 aa13.33□□□□□ -0.28
PRPF18-202ENST00000378572 ZNF398Q8TD17 642 aa13.33□□□□□ -0.28
PRPF18-202ENST00000378572 MR1Q95460 341 aa13.33□□□□□ -0.28
PRPF18-202ENST00000378572 ZNF514Q96K75 400 aaPredicted RBP13.33□□□□□ -0.28
PRPF18-202ENST00000378572 CD180Q99467 661 aa13.33□□□□□ -0.28
PRPF18-202ENST00000378572 TTC1Q99614 292 aa13.33□□□□□ -0.28
PRPF18-202ENST00000378572 RAB33BQ9H082 229 aa13.33□□□□□ -0.28
PRPF18-202ENST00000378572 ASB8Q9H765 288 aa13.33□□□□□ -0.28
PRPF18-202ENST00000378572 FANCEQ9HB96 536 aa13.33□□□□□ -0.28
PRPF18-202ENST00000378572 FBXO6Q9NRD1 293 aaPredicted RBP13.33□□□□□ -0.28
PRPF18-202ENST00000378572 ANKMY1Q9P2S6 941 aa13.33□□□□□ -0.28
PRPF18-202ENST00000378572 OR6C74A6NCV1 312 aa13.32□□□□□ -0.28
PRPF18-202ENST00000378572 CPNE3O75131 537 aaKnown RBP13.32□□□□□ -0.28
PRPF18-202ENST00000378572 SCRG1O75711 98 aa13.32□□□□□ -0.28
PRPF18-202ENST00000378572 HAUS5O94927 633 aa13.32□□□□□ -0.28
PRPF18-202ENST00000378572 RALBP11234 206 aa13.32□□□□□ -0.28
PRPF18-202ENST00000378572 CA5AP35218 305 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms