RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 ZNF776Q68DI1 518 aaPredicted RBP13.82□□□□□ -0.2
TRIM13-202ENST00000378182 VASH1Q7L8A9 365 aaPredicted RBP13.82□□□□□ -0.2
TRIM13-202ENST00000378182 NXPE2Q96DL1 559 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 SUV39H2Q9H5I1 410 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 C8orf4Q9NR00 106 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 PPM1HQ9ULR3 514 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 TMEM5Q9Y2B1 443 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 TCAF1Q9Y4C2 921 aa13.82□□□□□ -0.2
TRIM13-202ENST00000378182 AHCYL1O43865 530 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 EIF2S3LQ2VIR3 472 aaKnown RBP13.81□□□□□ -0.2
TRIM13-202ENST00000378182 TAS1R3Q7RTX0 852 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 STK32AQ8WU08 396 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 RGMAQ96B86 450 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 PDLIM2Q96JY6 352 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 TCF12Q99081 682 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 PTPRUQ92729 1446 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 DAPL1A0PJW8 107 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 SLC35F4A4IF30 521 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 PRAMEF12O95522 483 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 DSG2Q14126 1118 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 LPCAT4Q643R3 524 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 CRTC1Q6UUV9 634 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 ZNF565Q8N9K5 539 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 KCNH6Q9H252 994 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 C12orf65Q9H3J6 166 aaKnown RBP13.81□□□□□ -0.2
TRIM13-202ENST00000378182 ZNF224Q9NZL3 707 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 CALML5Q9NZT1 146 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 ATXN7L1Q9ULK2 861 aaPredicted RBP13.81□□□□□ -0.2
TRIM13-202ENST00000378182 FARSAQ9Y285 508 aaKnown RBP13.81□□□□□ -0.2
TRIM13-202ENST00000378182 SLIT1O75093 1534 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 hCG_1807616A0A1W2PRN6 198 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 SPATA31C1P0DKV0 1188 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 CHRNA4P43681 627 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 FOXR2Q6PJQ5 311 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 SLC22A18Q96BI1 424 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 NPLQ9BXD5 320 aaPredicted RBP13.81□□□□□ -0.2
TRIM13-202ENST00000378182 EDDM13A0A1B0GTR0 161 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 MATN3O15232 486 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 SDC3O75056 442 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 SRCP12931 536 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 CSTF1Q05048 431 aaKnown RBP13.81□□□□□ -0.2
TRIM13-202ENST00000378182 PRPF38BQ5VTL8 546 aaKnown RBP13.81□□□□□ -0.2
TRIM13-202ENST00000378182 USP30Q70CQ3 517 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 PLCZ1Q86YW0 608 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 ZNF676Q8N7Q3 588 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 SLC22A17Q8WUG5 538 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 PNPLA2Q96AD5 504 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 GPR174Q9BXC1 333 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 RNF13O43567 381 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 CCNCP24863 283 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 NDST2P52849 883 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 E2F2Q14209 437 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 PLEKHG6Q3KR16 790 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 SGIP1Q9BQI5 828 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 TOR3AQ9H497 397 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 C19orf25Q9UFG5 118 aaPredicted RBP13.81□□□□□ -0.2
TRIM13-202ENST00000378182 FZD10Q9ULW2 581 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 FAM240BA0A1B0GVZ2 78 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 CCNFP41002 786 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 ARRB1P49407 418 aaPredicted RBP13.81□□□□□ -0.2
TRIM13-202ENST00000378182 BBS12Q6ZW61 710 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 KLHDC7BQ96G42 594 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 UNC93B1Q9H1C4 597 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 PMF1-BGLAPU3KQ54 211 aa13.81□□□□□ -0.2
TRIM13-202ENST00000378182 GLOD5A6NK44 160 aa13.8□□□□□ -0.2
TRIM13-202ENST00000378182 C11orf98E9PRG8 122 aa13.8□□□□□ -0.2
TRIM13-202ENST00000378182 PIP5K1BO14986 540 aa13.8□□□□□ -0.2
TRIM13-202ENST00000378182 CH25HO95992 272 aa13.8□□□□□ -0.2
TRIM13-202ENST00000378182 ZACNQ401N2 412 aa13.8□□□□□ -0.2
TRIM13-202ENST00000378182 TIGD5Q53EQ6 642 aa13.8□□□□□ -0.2
TRIM13-202ENST00000378182 ALG10Q5BKT4 473 aa13.8□□□□□ -0.2
TRIM13-202ENST00000378182 PRAMEF14Q5SWL7 426 aa13.8□□□□□ -0.2
TRIM13-202ENST00000378182 PRAMEF17Q5VTA0 474 aa13.8□□□□□ -0.2
TRIM13-202ENST00000378182 PRAMEF13Q5VWM6 474 aa13.8□□□□□ -0.2
TRIM13-202ENST00000378182 CMTM8Q8IZV2 173 aa13.8□□□□□ -0.2
TRIM13-202ENST00000378182 HPS1Q92902 700 aa13.8□□□□□ -0.2
TRIM13-202ENST00000378182 KCNC2Q96PR1 638 aa13.8□□□□□ -0.2
TRIM13-202ENST00000378182 CIB1Q99828 191 aa13.8□□□□□ -0.2
TRIM13-202ENST00000378182 SLCO1B3Q9NPD5 702 aa13.8□□□□□ -0.2
TRIM13-202ENST00000378182 TDP1Q9NUW8 608 aa13.8□□□□□ -0.2
TRIM13-202ENST00000378182 STXBP5LQ9Y2K9 1186 aa13.8□□□□□ -0.2
TRIM13-202ENST00000378182 KCNJ13O60928 360 aa13.8□□□□□ -0.2
TRIM13-202ENST00000378182 CILPO75339 1184 aa13.8□□□□□ -0.2
TRIM13-202ENST00000378182 SEMA3DO95025 777 aa13.8□□□□□ -0.2
TRIM13-202ENST00000378182 C4BPAP04003 597 aaKnown RBP13.8□□□□□ -0.2
TRIM13-202ENST00000378182 CYP11A1P05108 521 aa13.8□□□□□ -0.2
TRIM13-202ENST00000378182 AZGP1P25311 298 aaKnown RBP13.8□□□□□ -0.2
TRIM13-202ENST00000378182 VSX2P58304 361 aaPredicted RBP13.8□□□□□ -0.2
TRIM13-202ENST00000378182 S100A10P60903 97 aa13.8□□□□□ -0.2
TRIM13-202ENST00000378182 ZNF234Q14588 700 aa13.8□□□□□ -0.2
TRIM13-202ENST00000378182 AIFM2Q9BRQ8 373 aa13.8□□□□□ -0.2
TRIM13-202ENST00000378182 HEMK1Q9Y5R4 338 aaPredicted RBP13.8□□□□□ -0.2
TRIM13-202ENST00000378182 SOWAHBA6NEL2 793 aa13.8□□□□□ -0.2
TRIM13-202ENST00000378182 PGRP06401 933 aa13.8□□□□□ -0.2
TRIM13-202ENST00000378182 SLC3A1Q07837 685 aa13.8□□□□□ -0.2
TRIM13-202ENST00000378182 SUSD1Q6UWL2 747 aa13.8□□□□□ -0.2
TRIM13-202ENST00000378182 ZNF782Q6ZMW2 699 aaPredicted RBP13.8□□□□□ -0.2
TRIM13-202ENST00000378182 TCEANCQ8N8B7 351 aa13.8□□□□□ -0.2
TRIM13-202ENST00000378182 OR52E4Q8NGH9 312 aa13.8□□□□□ -0.2
TRIM13-202ENST00000378182 BPIFB1Q8TDL5 484 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms