RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 ZPBPQ9BS86 351 aa12.79□□□□□ -0.36
CKAP2-202ENST00000378034 DDA1Q9BW61 102 aa12.79□□□□□ -0.36
CKAP2-202ENST00000378034 CCDC86Q9H6F5 360 aaKnown RBP12.79□□□□□ -0.36
CKAP2-202ENST00000378034 THSD1Q9NS62 852 aa12.79□□□□□ -0.36
CKAP2-202ENST00000378034 INTS7Q9NVH2 962 aaKnown RBP12.79□□□□□ -0.36
CKAP2-202ENST00000378034 OCIAD1Q9NX40 245 aa12.79□□□□□ -0.36
CKAP2-202ENST00000378034 SIDT1Q9NXL6 827 aaKnown RBP12.79□□□□□ -0.36
CKAP2-202ENST00000378034 PISDQ9UG56 409 aa12.79□□□□□ -0.36
CKAP2-202ENST00000378034 TLK1Q9UKI8 766 aa12.79□□□□□ -0.36
CKAP2-202ENST00000378034 ACOT9Q9Y305 439 aa12.79□□□□□ -0.36
CKAP2-202ENST00000378034 PCDHGA3Q9Y5H0 932 aa12.79□□□□□ -0.36
CKAP2-202ENST00000378034 SLC9B1P1A6NJY1 282 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 NVLO15381 856 aaKnown RBP12.78□□□□□ -0.36
CKAP2-202ENST00000378034 BRINP1O60477 761 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 CCL4P13236 92 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 HGFP14210 728 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 TYK2P29597 1187 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 CDKL1Q00532 357 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 ACY1Q03154 408 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 CYP4F3Q08477 520 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 BMPR2Q13873 1038 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 IL11RAQ14626 422 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 TAF1BQ53T94 588 aaPredicted RBP12.78□□□□□ -0.36
CKAP2-202ENST00000378034 CMC1Q7Z7K0 106 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 CLEC14AQ86T13 490 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 BPHLQ86WA6 291 aaPredicted RBP12.78□□□□□ -0.36
CKAP2-202ENST00000378034 SYTL1Q8IYJ3 562 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 LMNTD1Q8N9Z9 388 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 MTBPQ96DY7 904 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 TRAPPC9Q96Q05 1148 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 TEFMQ96QE5 360 aaKnown RBP12.78□□□□□ -0.36
CKAP2-202ENST00000378034 ASPSCR1Q9BZE9 553 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 NMRAL1Q9HBL8 299 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 ASCL3Q9NQ33 180 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 SNX15Q9NRS6 342 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 SLC39A1Q9NY26 324 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 PCDHB11Q9Y5F2 797 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 CDRT15L2A8MXV6 281 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 E7ENX8 843 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 SNRPAP09012 282 aaKnown RBP12.78□□□□□ -0.36
CKAP2-202ENST00000378034 MSL3P1P0C860 447 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 CD1DP15813 335 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 CCND1P24385 295 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 IMPA1P29218 277 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 TAP2Q03519 686 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 SF1Q15637 639 aaKnown RBP12.78□□□□□ -0.36
CKAP2-202ENST00000378034 PHKG1Q16816 387 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 PPP1R3AQ16821 1122 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 DCAF12Q5T6F0 453 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 CEACAM20Q6UY09 585 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 LRRC56Q8IYG6 542 aaPredicted RBP12.78□□□□□ -0.36
CKAP2-202ENST00000378034 TCTN2Q96GX1 697 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 PCBD2Q9H0N5 130 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 PDE7BQ9NP56 450 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 ARL15Q9NXU5 204 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 STOX2Q9P2F5 926 aaPredicted RBP12.78□□□□□ -0.36
CKAP2-202ENST00000378034 OARD1Q9Y530 152 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 KLK4Q9Y5K2 254 aa12.78□□□□□ -0.36
CKAP2-202ENST00000378034 ADAMTS20P59510 1910 aa12.77□□□□□ -0.36
CKAP2-202ENST00000378034 A0A1W2PPV9 198 aa12.77□□□□□ -0.37
CKAP2-202ENST00000378034 KRT87PA6NCN2 255 aa12.77□□□□□ -0.37
CKAP2-202ENST00000378034 NPEPPSL1A6NEC2 478 aa12.77□□□□□ -0.37
CKAP2-202ENST00000378034 CDC7O00311 574 aa12.77□□□□□ -0.37
CKAP2-202ENST00000378034 CCNDBP1O95273 360 aa12.77□□□□□ -0.37
CKAP2-202ENST00000378034 ALDOAP04075 364 aaKnown RBP12.77□□□□□ -0.37
CKAP2-202ENST00000378034 CAPNS1P04632 268 aa12.77□□□□□ -0.37
CKAP2-202ENST00000378034 C2P06681 752 aa12.77□□□□□ -0.37
CKAP2-202ENST00000378034 LTA4HP09960 611 aaKnown RBP12.77□□□□□ -0.37
CKAP2-202ENST00000378034 ST6GAL1P15907 406 aa12.77□□□□□ -0.37
CKAP2-202ENST00000378034 ITIH1P19827 911 aa12.77□□□□□ -0.37
CKAP2-202ENST00000378034 CD82P27701 267 aa12.77□□□□□ -0.37
CKAP2-202ENST00000378034 GCAP28676 217 aa12.77□□□□□ -0.37
CKAP2-202ENST00000378034 RPA3P35244 121 aaPredicted RBP12.77□□□□□ -0.37
CKAP2-202ENST00000378034 ETV5P41161 510 aa12.77□□□□□ -0.37
CKAP2-202ENST00000378034 MAGEA12P43365 314 aa12.77□□□□□ -0.37
CKAP2-202ENST00000378034 MAPK10P53779 464 aa12.77□□□□□ -0.37
CKAP2-202ENST00000378034 FASTKQ14296 549 aaKnown RBP12.77□□□□□ -0.37
CKAP2-202ENST00000378034 CSHL1Q14406 222 aa12.77□□□□□ -0.37
CKAP2-202ENST00000378034 TBC1D25Q3MII6 688 aa12.77□□□□□ -0.37
CKAP2-202ENST00000378034 CDKL4Q5MAI5 379 aa12.77□□□□□ -0.37
CKAP2-202ENST00000378034 C2orf73Q8N5S3 287 aaPredicted RBP12.77□□□□□ -0.37
CKAP2-202ENST00000378034 OR2A1Q8NGT9 310 aa12.77□□□□□ -0.37
CKAP2-202ENST00000378034 OR8K5Q8NH50 307 aa12.77□□□□□ -0.37
CKAP2-202ENST00000378034 KIAA1191Q96A73 305 aa12.77□□□□□ -0.37
CKAP2-202ENST00000378034 ZUFSPQ96AP4 578 aa12.77□□□□□ -0.37
CKAP2-202ENST00000378034 FBXL8Q96CD0 374 aa12.77□□□□□ -0.37
CKAP2-202ENST00000378034 PPM1MQ96MI6 270 aa12.77□□□□□ -0.37
CKAP2-202ENST00000378034 SOHLH2Q9NX45 425 aa12.77□□□□□ -0.37
CKAP2-202ENST00000378034 PSMC3IPQ9P2W1 217 aaPredicted RBP12.77□□□□□ -0.37
CKAP2-202ENST00000378034 ACSL6Q9UKU0 697 aa12.77□□□□□ -0.37
CKAP2-202ENST00000378034 CEP295Q9C0D2 2601 aa12.77□□□□□ -0.37
CKAP2-202ENST00000378034 A0A096LPK6 155 aa12.76□□□□□ -0.37
CKAP2-202ENST00000378034 IQANK1A0A1B0GTG1 560 aa12.76□□□□□ -0.37
CKAP2-202ENST00000378034 PMS2P1A4D2B8 440 aa12.76□□□□□ -0.37
CKAP2-202ENST00000378034 TARM1B6A8C7 271 aa12.76□□□□□ -0.37
CKAP2-202ENST00000378034 POLR1CO15160 346 aaPredicted RBP12.76□□□□□ -0.37
CKAP2-202ENST00000378034 CMPK1P30085 196 aa12.76□□□□□ -0.37
CKAP2-202ENST00000378034 HSD17B3P37058 310 aa12.76□□□□□ -0.37
CKAP2-202ENST00000378034 HNMTP50135 292 aa12.76□□□□□ -0.37
CKAP2-202ENST00000378034 ABATP80404 500 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms