RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 ITGA2P17301 1181 aa10.59□□□□□ -0.71
HIF3A-205ENST00000377670 DRD1P21728 446 aa10.59□□□□□ -0.71
HIF3A-205ENST00000377670 HCAR3P49019 387 aa10.59□□□□□ -0.71
HIF3A-205ENST00000377670 CLCNKAP51800 687 aa10.59□□□□□ -0.71
HIF3A-205ENST00000377670 SMIM11AP58511 58 aa10.59□□□□□ -0.71
HIF3A-205ENST00000377670 NAPRTQ6XQN6 538 aa10.59□□□□□ -0.71
HIF3A-205ENST00000377670 NUP54Q7Z3B4 507 aa10.59□□□□□ -0.71
HIF3A-205ENST00000377670 SAMD14Q8IZD0 417 aaPredicted RBP10.59□□□□□ -0.71
HIF3A-205ENST00000377670 SLC34A3Q8N130 599 aa10.59□□□□□ -0.71
HIF3A-205ENST00000377670 CAMKVQ8NCB2 501 aa10.59□□□□□ -0.71
HIF3A-205ENST00000377670 ESAMQ96AP7 390 aa10.59□□□□□ -0.71
HIF3A-205ENST00000377670 SLC38A2Q96QD8 506 aa10.59□□□□□ -0.71
HIF3A-205ENST00000377670 GFM1Q96RP9 751 aaKnown RBP10.59□□□□□ -0.71
HIF3A-205ENST00000377670 HBEGFQ99075 208 aa10.59□□□□□ -0.71
HIF3A-205ENST00000377670 IGSF9Q9P2J2 1179 aa10.59□□□□□ -0.71
HIF3A-205ENST00000377670 MAGEL2Q9UJ55 1249 aa10.59□□□□□ -0.71
HIF3A-205ENST00000377670 DKKL1Q9UK85 242 aa10.59□□□□□ -0.71
HIF3A-205ENST00000377670 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.59□□□□□ -0.71
HIF3A-205ENST00000377670 AKAP11Q9UKA4 1901 aa10.59□□□□□ -0.71
HIF3A-205ENST00000377670 OR51F1A6NGY5 319 aa10.59□□□□□ -0.71
HIF3A-205ENST00000377670 UPK3BL1B0FP48 263 aa10.59□□□□□ -0.71
HIF3A-205ENST00000377670 UPK3BL2E5RIL1 263 aa10.59□□□□□ -0.71
HIF3A-205ENST00000377670 RFPL2O75678 378 aa10.59□□□□□ -0.71
HIF3A-205ENST00000377670 DLDP09622 509 aaKnown RBP10.59□□□□□ -0.71
HIF3A-205ENST00000377670 UGT1A5P35504 534 aa10.59□□□□□ -0.71
HIF3A-205ENST00000377670 UGT2B15P54855 530 aa10.59□□□□□ -0.71
HIF3A-205ENST00000377670 LARS2Q15031 903 aaKnown RBP10.59□□□□□ -0.71
HIF3A-205ENST00000377670 RALGPS1Q5JS13 557 aa10.59□□□□□ -0.71
HIF3A-205ENST00000377670 BICRALQ6AI39 1079 aa10.59□□□□□ -0.71
HIF3A-205ENST00000377670 LPGAT1Q92604 370 aa10.59□□□□□ -0.71
HIF3A-205ENST00000377670 EXOSC8Q96B26 276 aaKnown RBP10.59□□□□□ -0.71
HIF3A-205ENST00000377670 NXNL1Q96CM4 212 aa10.59□□□□□ -0.71
HIF3A-205ENST00000377670 FNDC11Q9BVV2 318 aa10.59□□□□□ -0.71
HIF3A-205ENST00000377670 STOML2Q9UJZ1 356 aa10.59□□□□□ -0.71
HIF3A-205ENST00000377670 FAM240BA0A1B0GVZ2 78 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 REM1O75628 298 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 LRATO95237 230 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 CRHR1P34998 444 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 TIGD2Q4W5G0 525 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 OGFOD2Q6N063 350 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 CUZD1Q86UP6 607 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 SLC44A1Q8WWI5 657 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 PEBP4Q96S96 227 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 RTP3Q9BQQ7 232 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 TBL1XR1Q9BZK7 514 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 XYLT2Q9H1B5 865 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 SPHK2Q9NRA0 654 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 NKIRAS2Q9NYR9 191 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 FLRT1Q9NZU1 646 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 RCOR3Q9P2K3 495 aaPredicted RBP10.58□□□□□ -0.72
HIF3A-205ENST00000377670 CLEC4AQ9UMR7 237 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 POLR3HQ9Y535 204 aaPredicted RBP10.58□□□□□ -0.72
HIF3A-205ENST00000377670 C9JVG2 144 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 SLC22A3O75751 556 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 IL33O95760 270 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 ZNF12P17014 697 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 CLCN7P51798 805 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 MAPK12P53778 367 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 NRG1Q02297 640 aaPredicted RBP10.58□□□□□ -0.72
HIF3A-205ENST00000377670 KCTD8Q6ZWB6 473 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 CXXC5Q7LFL8 322 aaKnown RBP10.58□□□□□ -0.72
HIF3A-205ENST00000377670 JAZF1Q86VZ6 243 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 STX12Q86Y82 276 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 CBR4Q8N4T8 237 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 SLC35F5Q8WV83 523 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 HHIPL1Q96JK4 782 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 SMOQ99835 787 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 METTL7AQ9H8H3 244 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 MIOSQ9NXC5 875 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 APOBEC3BQ9UH17 382 aaKnown RBP10.58□□□□□ -0.72
HIF3A-205ENST00000377670 VWA7Q9Y334 891 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 MYH7P12883 1935 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 A0A1W2PP55 124 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 NPEPPSL1A6NEC2 478 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 BCKDKO14874 412 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 PI15O43692 258 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 MT-ND1P03886 318 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.58□□□□□ -0.72
HIF3A-205ENST00000377670 PRRT3Q5FWE3 981 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 ERICH5Q6P6B1 374 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 FRMD7Q6ZUT3 714 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 HOPXQ9BPY8 73 aaPredicted RBP10.58□□□□□ -0.72
HIF3A-205ENST00000377670 ZSCAN5AQ9BUG6 496 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 DNAAF2Q9NVR5 837 aaKnown RBP10.58□□□□□ -0.72
HIF3A-205ENST00000377670 TRPS1Q9UHF7 1281 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 SNX7Q9UNH6 387 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 GPC6Q9Y625 555 aaPredicted RBP10.58□□□□□ -0.72
HIF3A-205ENST00000377670 GLI3P10071 1580 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 DCLK1O15075 740 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 NPC1O15118 1278 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 KMOO15229 486 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 RGS10O43665 173 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 EDN1P05305 212 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 EDNRBP24530 442 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 TAS2R41P59536 307 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 FAM91A1Q658Y4 838 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 PEG10Q86TG7 708 aaKnown RBP10.58□□□□□ -0.72
HIF3A-205ENST00000377670 OR2AP1Q8NGE2 309 aa10.58□□□□□ -0.72
HIF3A-205ENST00000377670 ZBED3Q96IU2 234 aaPredicted RBP10.58□□□□□ -0.72
HIF3A-205ENST00000377670 GBA3Q9H227 469 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms