RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 PSIP1O75475 530 aaKnown RBP16.19■□□□□ 0.18
HMGN4-201ENST00000377575 ENO3P13929 434 aaPredicted RBP16.19■□□□□ 0.18
HMGN4-201ENST00000377575 IVDP26440 423 aa16.19■□□□□ 0.18
HMGN4-201ENST00000377575 GABRA4P48169 554 aa16.19■□□□□ 0.18
HMGN4-201ENST00000377575 RPS18P62269 152 aaKnown RBP16.19■□□□□ 0.18
HMGN4-201ENST00000377575 MPP1Q00013 466 aa16.19■□□□□ 0.18
HMGN4-201ENST00000377575 NAA25Q14CX7 972 aa16.19■□□□□ 0.18
HMGN4-201ENST00000377575 UGT8Q16880 541 aa16.19■□□□□ 0.18
HMGN4-201ENST00000377575 CCSMST1Q4G0I0 132 aa16.19■□□□□ 0.18
HMGN4-201ENST00000377575 DNAJC22Q8N4W6 341 aa16.19■□□□□ 0.18
HMGN4-201ENST00000377575 ENDOVQ8N8Q3 282 aaKnown RBP16.19■□□□□ 0.18
HMGN4-201ENST00000377575 C2CD4AQ8NCU7 369 aaPredicted RBP16.19■□□□□ 0.18
HMGN4-201ENST00000377575 PROKR1Q8TCW9 393 aa16.19■□□□□ 0.18
HMGN4-201ENST00000377575 SNF8Q96H20 258 aa16.19■□□□□ 0.18
HMGN4-201ENST00000377575 RUFY1Q96T51 708 aa16.19■□□□□ 0.18
HMGN4-201ENST00000377575 NLNQ9BYT8 704 aa16.19■□□□□ 0.18
HMGN4-201ENST00000377575 GALPQ9UBC7 116 aa16.19■□□□□ 0.18
HMGN4-201ENST00000377575 SNX7Q9UNH6 387 aa16.19■□□□□ 0.18
HMGN4-201ENST00000377575 MAN2B2Q9Y2E5 1009 aa16.19■□□□□ 0.18
HMGN4-201ENST00000377575 SPTA1P02549 2419 aa16.19■□□□□ 0.18
HMGN4-201ENST00000377575 GCN1Q92616 2671 aaKnown RBP16.19■□□□□ 0.18
HMGN4-201ENST00000377575 SEC16AO15027 2179 aa16.19■□□□□ 0.18
HMGN4-201ENST00000377575 ZNF839A8K0R7 811 aa16.18■□□□□ 0.18
HMGN4-201ENST00000377575 ARHGEF33A8MVX0 844 aa16.18■□□□□ 0.18
HMGN4-201ENST00000377575 TTI1O43156 1089 aa16.18■□□□□ 0.18
HMGN4-201ENST00000377575 VPS26AO75436 327 aa16.18■□□□□ 0.18
HMGN4-201ENST00000377575 BANF1O75531 89 aa16.18■□□□□ 0.18
HMGN4-201ENST00000377575 F7P08709 466 aaPredicted RBP16.18■□□□□ 0.18
HMGN4-201ENST00000377575 FURINP09958 794 aa16.18■□□□□ 0.18
HMGN4-201ENST00000377575 CBSLP0DN79 551 aa16.18■□□□□ 0.18
HMGN4-201ENST00000377575 CBSP35520 551 aa16.18■□□□□ 0.18
HMGN4-201ENST00000377575 HIF1AQ16665 826 aa16.18■□□□□ 0.18
HMGN4-201ENST00000377575 CYP2A13Q16696 494 aa16.18■□□□□ 0.18
HMGN4-201ENST00000377575 PTCHD3Q3KNS1 767 aa16.18■□□□□ 0.18
HMGN4-201ENST00000377575 MSS51Q4VC12 460 aa16.18■□□□□ 0.18
HMGN4-201ENST00000377575 ZC3H12BQ5HYM0 836 aaKnown RBP16.18■□□□□ 0.18
HMGN4-201ENST00000377575 LRRC8EQ6NSJ5 796 aa16.18■□□□□ 0.18
HMGN4-201ENST00000377575 RHBDD2Q6NTF9 364 aa16.18■□□□□ 0.18
HMGN4-201ENST00000377575 UGT3A1Q6NUS8 523 aa16.18■□□□□ 0.18
HMGN4-201ENST00000377575 ZNF549Q6P9A3 640 aa16.18■□□□□ 0.18
HMGN4-201ENST00000377575 FAM198BQ6UWH4 519 aa16.18■□□□□ 0.18
HMGN4-201ENST00000377575 FAM20CQ8IXL6 584 aa16.18■□□□□ 0.18
HMGN4-201ENST00000377575 LMNTD1Q8N9Z9 388 aa16.18■□□□□ 0.18
HMGN4-201ENST00000377575 OR9A1PQ8NGU1 263 aa16.18■□□□□ 0.18
HMGN4-201ENST00000377575 GIMAP7Q8NHV1 300 aa16.18■□□□□ 0.18
HMGN4-201ENST00000377575 C9orf43Q8TAL5 461 aaPredicted RBP16.18■□□□□ 0.18
HMGN4-201ENST00000377575 DENND1AQ8TEH3 1009 aa16.18■□□□□ 0.18
HMGN4-201ENST00000377575 THAP4Q8WY91 577 aa16.18■□□□□ 0.18
HMGN4-201ENST00000377575 DLG3Q92796 817 aa16.18■□□□□ 0.18
HMGN4-201ENST00000377575 INPP5DQ92835 1189 aa16.18■□□□□ 0.18
HMGN4-201ENST00000377575 LRRC39Q96DD0 335 aa16.18■□□□□ 0.18
HMGN4-201ENST00000377575 GPR21Q99679 349 aa16.18■□□□□ 0.18
HMGN4-201ENST00000377575 TRIM51Q9BSJ1 452 aa16.18■□□□□ 0.18
HMGN4-201ENST00000377575 TXLNGQ9NUQ3 528 aa16.18■□□□□ 0.18
HMGN4-201ENST00000377575 EURLQ9NYK6 297 aa16.18■□□□□ 0.18
HMGN4-201ENST00000377575 PADI2Q9Y2J8 665 aa16.18■□□□□ 0.18
HMGN4-201ENST00000377575 KCNMB2Q9Y691 235 aa16.18■□□□□ 0.18
HMGN4-201ENST00000377575 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.18■□□□□ 0.18
HMGN4-201ENST00000377575 KRT87PA6NCN2 255 aa16.17■□□□□ 0.18
HMGN4-201ENST00000377575 H3BMH7 237 aa16.17■□□□□ 0.18
HMGN4-201ENST00000377575 MYO1CO00159 1063 aa16.17■□□□□ 0.18
HMGN4-201ENST00000377575 EIF3FO00303 357 aaPredicted RBP16.17■□□□□ 0.18
HMGN4-201ENST00000377575 HCRTR1O43613 425 aa16.17■□□□□ 0.18
HMGN4-201ENST00000377575 PRICKLE3O43900 615 aaPredicted RBP16.17■□□□□ 0.18
HMGN4-201ENST00000377575 HAUS5O94927 633 aa16.17■□□□□ 0.18
HMGN4-201ENST00000377575 SEC31AO94979 1220 aaKnown RBP16.17■□□□□ 0.18
HMGN4-201ENST00000377575 MPC1LP0DKB6 136 aa16.17■□□□□ 0.18
HMGN4-201ENST00000377575 ERVK-10P10266 1014 aa16.17■□□□□ 0.18
HMGN4-201ENST00000377575 ERGP11308 486 aa16.17■□□□□ 0.18
HMGN4-201ENST00000377575 PLA2G2AP14555 144 aa16.17■□□□□ 0.18
HMGN4-201ENST00000377575 HSD17B2P37059 387 aa16.17■□□□□ 0.18
HMGN4-201ENST00000377575 ITGA8P53708 1063 aa16.17■□□□□ 0.18
HMGN4-201ENST00000377575 PMS2P54278 862 aa16.17■□□□□ 0.18
HMGN4-201ENST00000377575 ARL4CP56559 192 aa16.17■□□□□ 0.18
HMGN4-201ENST00000377575 CUL1Q13616 776 aa16.17■□□□□ 0.18
HMGN4-201ENST00000377575 ARHGAP19Q14CB8 494 aa16.17■□□□□ 0.18
HMGN4-201ENST00000377575 NCF4Q15080 339 aa16.17■□□□□ 0.18
HMGN4-201ENST00000377575 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.17■□□□□ 0.18
HMGN4-201ENST00000377575 HIBCHQ6NVY1 386 aaPredicted RBP16.17■□□□□ 0.18
HMGN4-201ENST00000377575 FIGLAQ6QHK4 219 aa16.17■□□□□ 0.18
HMGN4-201ENST00000377575 KIAA0408Q6ZU52 694 aa16.17■□□□□ 0.18
HMGN4-201ENST00000377575 CNTN4Q8IWV2 1026 aa16.17■□□□□ 0.18
HMGN4-201ENST00000377575 ZNF655Q8N720 491 aaPredicted RBP16.17■□□□□ 0.18
HMGN4-201ENST00000377575 CD200R1Q8TD46 325 aa16.17■□□□□ 0.18
HMGN4-201ENST00000377575 ZUFSPQ96AP4 578 aa16.17■□□□□ 0.18
HMGN4-201ENST00000377575 CERS2Q96G23 380 aa16.17■□□□□ 0.18
HMGN4-201ENST00000377575 SLC30A3Q99726 388 aa16.17■□□□□ 0.18
HMGN4-201ENST00000377575 AARSD1Q9BTE6 412 aaKnown RBP16.17■□□□□ 0.18
HMGN4-201ENST00000377575 NDC1Q9BTX1 674 aa16.17■□□□□ 0.18
HMGN4-201ENST00000377575 DHRS4Q9BTZ2 278 aa16.17■□□□□ 0.18
HMGN4-201ENST00000377575 SPRTNQ9H040 489 aaPredicted RBP16.17■□□□□ 0.18
HMGN4-201ENST00000377575 PPANQ9NQ55 473 aaKnown RBP16.17■□□□□ 0.18
HMGN4-201ENST00000377575 TRMT6Q9UJA5 497 aaKnown RBP16.17■□□□□ 0.18
HMGN4-201ENST00000377575 KLHL20Q9Y2M5 609 aa16.17■□□□□ 0.18
HMGN4-201ENST00000377575 MED16Q9Y2X0 877 aa16.17■□□□□ 0.18
HMGN4-201ENST00000377575 DHRS7Q9Y394 339 aa16.17■□□□□ 0.18
HMGN4-201ENST00000377575 TARM1B6A8C7 271 aa16.16■□□□□ 0.18
HMGN4-201ENST00000377575 RFPL1O75677 317 aa16.16■□□□□ 0.18
HMGN4-201ENST00000377575 PSMB5P28074 263 aa16.16■□□□□ 0.18
HMGN4-201ENST00000377575 CMPK1P30085 196 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms