RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 MAMDC2Q7Z304 686 aaPredicted RBP15.16■□□□□ 0.02
FXN-201ENST00000377270 NECAB2Q7Z6G3 386 aa15.16■□□□□ 0.02
FXN-201ENST00000377270 ZC3HC1Q86WB0 502 aaKnown RBP15.16■□□□□ 0.02
FXN-201ENST00000377270 CMTR2Q8IYT2 770 aaKnown RBP15.16■□□□□ 0.02
FXN-201ENST00000377270 PELI3Q8N2H9 469 aa15.16■□□□□ 0.02
FXN-201ENST00000377270 OR13J1Q8NGT2 312 aa15.16■□□□□ 0.02
FXN-201ENST00000377270 ACE2Q9BYF1 805 aaPredicted RBP15.16■□□□□ 0.02
FXN-201ENST00000377270 HPF1Q9NWY4 346 aa15.16■□□□□ 0.02
FXN-201ENST00000377270 HS3ST4Q9Y661 456 aa15.16■□□□□ 0.02
FXN-201ENST00000377270 AQP12BA6NM10 295 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 E5RI56 91 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 E9PAM4 449 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 TPST1O60507 370 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 AHSGP02765 367 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 ACADMP11310 421 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 NAGLUP54802 743 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 USP10Q14694 798 aaKnown RBP15.15■□□□□ 0.02
FXN-201ENST00000377270 DENND5AQ6IQ26 1287 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 ZNF425Q6IV72 752 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 FAM45BPQ6NSW5 357 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 GLB1LQ6UWU2 654 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 ZYG11AQ6WRX3 759 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 STX12Q86Y82 276 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 AQP12AQ8IXF9 295 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 DDIASQ8IXT1 998 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 KLHDC8BQ8IXV7 354 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 OR8K5Q8NH50 307 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 FAM45AQ8TCE6 357 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 KLHL15Q96M94 604 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 ATXN3LQ9H3M9 355 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 SOX17Q9H6I2 414 aaPredicted RBP15.15■□□□□ 0.02
FXN-201ENST00000377270 TASP1Q9H6P5 420 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 TBC1D13Q9NVG8 400 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 OSER1Q9NX31 292 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 TP53BP1Q12888 1972 aaPredicted RBP15.15■□□□□ 0.02
FXN-201ENST00000377270 MRASO14807 208 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 HLA-DQB2P05538 268 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 APOA4P06727 396 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 FABP1P07148 127 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 ELNP15502 786 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 HDCP19113 662 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 AVPR1AP37288 418 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 RPS9P46781 194 aaKnown RBP15.15■□□□□ 0.02
FXN-201ENST00000377270 ARCN1P48444 511 aaKnown RBP15.15■□□□□ 0.02
FXN-201ENST00000377270 MEOX2P50222 304 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 MAP2K6P52564 334 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 SLC7A2P52569 658 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 DEFA1P59665 94 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 DEFA3P59666 94 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 ADARB1P78563 741 aaKnown RBP15.15■□□□□ 0.02
FXN-201ENST00000377270 CTBP1Q13363 440 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 ARTNQ5T4W7 220 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 ESRP1Q6NXG1 681 aaKnown RBP15.15■□□□□ 0.02
FXN-201ENST00000377270 ZNF517Q6ZMY9 492 aaPredicted RBP15.15■□□□□ 0.02
FXN-201ENST00000377270 RTN4RL1Q86UN2 441 aaPredicted RBP15.15■□□□□ 0.02
FXN-201ENST00000377270 OR4D10Q8NGI6 311 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 HMGCLL1Q8TB92 370 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 RDH11Q8TC12 318 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 UTP15Q8TED0 518 aaKnown RBP15.15■□□□□ 0.02
FXN-201ENST00000377270 GANCQ8TET4 914 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 GPR22Q99680 433 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 RHOJQ9H4E5 214 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 NSMCE4AQ9NXX6 385 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 SLC23A1Q9UHI7 598 aa15.15■□□□□ 0.02
FXN-201ENST00000377270 SDHDO14521 159 aa15.14■□□□□ 0.01
FXN-201ENST00000377270 OR2B3O76000 313 aa15.14■□□□□ 0.01
FXN-201ENST00000377270 APEHP13798 732 aaKnown RBP15.14■□□□□ 0.01
FXN-201ENST00000377270 PRKAR2AP13861 404 aaKnown RBP15.14■□□□□ 0.01
FXN-201ENST00000377270 OR1G1P47890 313 aa15.14■□□□□ 0.01
FXN-201ENST00000377270 POU3F4P49335 361 aa15.14■□□□□ 0.01
FXN-201ENST00000377270 GPR15P49685 360 aa15.14■□□□□ 0.01
FXN-201ENST00000377270 GEMP55040 296 aa15.14■□□□□ 0.01
FXN-201ENST00000377270 PLIN5Q00G26 463 aa15.14■□□□□ 0.01
FXN-201ENST00000377270 SLAMF1Q13291 335 aa15.14■□□□□ 0.01
FXN-201ENST00000377270 GPR50Q13585 617 aa15.14■□□□□ 0.01
FXN-201ENST00000377270 FASTKQ14296 549 aaKnown RBP15.14■□□□□ 0.01
FXN-201ENST00000377270 AGKQ53H12 422 aa15.14■□□□□ 0.01
FXN-201ENST00000377270 RBM20Q5T481 1227 aaKnown RBP15.14■□□□□ 0.01
FXN-201ENST00000377270 C8orf82Q6P1X6 216 aaPredicted RBP15.14■□□□□ 0.01
FXN-201ENST00000377270 LAYNQ6UX15 382 aa15.14■□□□□ 0.01
FXN-201ENST00000377270 RNF180Q86T96 592 aa15.14■□□□□ 0.01
FXN-201ENST00000377270 GPAT4Q86UL3 456 aa15.14■□□□□ 0.01
FXN-201ENST00000377270 COMMD7Q86VX2 200 aa15.14■□□□□ 0.01
FXN-201ENST00000377270 DENND6AQ8IWF6 608 aa15.14■□□□□ 0.01
FXN-201ENST00000377270 PPHLN1Q8NEY8 458 aaKnown RBP15.14■□□□□ 0.01
FXN-201ENST00000377270 DYNC2LI1Q8TCX1 351 aa15.14■□□□□ 0.01
FXN-201ENST00000377270 SLC7A6Q92536 515 aa15.14■□□□□ 0.01
FXN-201ENST00000377270 FSD1LQ9BXM9 530 aa15.14■□□□□ 0.01
FXN-201ENST00000377270 RC3H2Q9HBD1 1191 aaKnown RBP15.14■□□□□ 0.01
FXN-201ENST00000377270 PPP1R14DQ9NXH3 145 aa15.14■□□□□ 0.01
FXN-201ENST00000377270 NUFIP1Q9UHK0 495 aaKnown RBP15.14■□□□□ 0.01
FXN-201ENST00000377270 SLC22A7Q9Y694 548 aa15.14■□□□□ 0.01
FXN-201ENST00000377270 COL4A4P53420 1690 aaPredicted RBP15.14■□□□□ 0.01
FXN-201ENST00000377270 SNRPB2P08579 225 aaKnown RBP15.14■□□□□ 0.01
FXN-201ENST00000377270 FLI1Q01543 452 aaPredicted RBP15.14■□□□□ 0.01
FXN-201ENST00000377270 TIGD7Q6NT04 549 aaPredicted RBP15.14■□□□□ 0.01
FXN-201ENST00000377270 LRFN4Q6PJG9 635 aa15.14■□□□□ 0.01
FXN-201ENST00000377270 SPPL2CQ8IUH8 684 aa15.14■□□□□ 0.01
FXN-201ENST00000377270 RTL3Q8N8U3 475 aaKnown RBP15.14■□□□□ 0.01
FXN-201ENST00000377270 MAGEE2Q8TD90 523 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms