RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 SLC8B1Q6J4K2 584 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 Q6ZVL8 140 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 ZNF540Q8NDQ6 660 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 OR2AP1Q8NGE2 309 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 MCOLN3Q8TDD5 553 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 CYB5D2Q8WUJ1 264 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 RBM4BQ9BQ04 359 aaKnown RBP12.59□□□□□ -0.39
USP11-204ENST00000377107 RBM4Q9BWF3 364 aaKnown RBP12.59□□□□□ -0.39
USP11-204ENST00000377107 ASPSCR1Q9BZE9 553 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 RAPGEFL1Q9UHV5 662 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.59□□□□□ -0.39
USP11-204ENST00000377107 ATP11BQ9Y2G3 1177 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 GMPPBQ9Y5P6 360 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 ENGP17813 658 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 JAK1P23458 1154 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 DCTP40126 519 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 PLA2G16P53816 162 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 SNRPD1P62314 119 aaKnown RBP12.59□□□□□ -0.39
USP11-204ENST00000377107 CYP4F2P78329 520 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 SLC14A1Q13336 389 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 INO80DQ53TQ3 878 aaPredicted RBP12.59□□□□□ -0.39
USP11-204ENST00000377107 ADNP2Q6IQ32 1131 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 SZRD1Q7Z422 152 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 MSRB3Q8IXL7 192 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 SLC15A4Q8N697 577 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 LILRA3Q8N6C8 439 aaPredicted RBP12.59□□□□□ -0.39
USP11-204ENST00000377107 DCAF4L2Q8NA75 395 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 REXO5Q96IC2 774 aaKnown RBP12.59□□□□□ -0.39
USP11-204ENST00000377107 SLC32A1Q9H598 525 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 BRD9Q9H8M2 597 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 B4GALT6Q9UBX8 382 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 MYOFQ9NZM1 2061 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 CCL16O15467 120 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 GPNMBQ14956 572 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 CTU2Q2VPK5 515 aaKnown RBP12.59□□□□□ -0.39
USP11-204ENST00000377107 PLEKHG6Q3KR16 790 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 DPP10Q8N608 796 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 RORBQ92753 470 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 SH3KBP1Q96B97 665 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 PLEKHA8Q96JA3 519 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 ACAT2Q9BWD1 397 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 AASDHPPTQ9NRN7 309 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 LMCD1Q9NZU5 365 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 SPASTQ9UBP0 616 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 ABCG2Q9UNQ0 655 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 ST14Q9Y5Y6 855 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 CLIC1O00299 241 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 ANKRD28O15084 1053 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 FAM20BO75063 409 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 EBLN1P0CF75 366 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 POU2F1P14859 743 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 CST5P28325 142 aaPredicted RBP12.58□□□□□ -0.4
USP11-204ENST00000377107 IDH2P48735 452 aaKnown RBP12.58□□□□□ -0.4
USP11-204ENST00000377107 MTA1Q13330 715 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 CARTPTQ16568 116 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 GPRC6AQ5T6X5 926 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 ZNF697Q5TEC3 545 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 GPR153Q6NV75 609 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 DUS1LQ6P1R4 473 aaKnown RBP12.58□□□□□ -0.4
USP11-204ENST00000377107 ADCK1Q86TW2 530 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 TRIM74Q86UV6 250 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 PDPRQ8NCN5 879 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 OR8J3Q8NGG0 315 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 FNDC8Q8TC99 324 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 C2orf15Q8WU43 125 aaKnown RBP12.58□□□□□ -0.4
USP11-204ENST00000377107 P2RY13Q9BPV8 354 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 FUNDC2Q9BWH2 189 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 SUV39H2Q9H5I1 410 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 TUBA8Q9NY65 449 aaPredicted RBP12.58□□□□□ -0.4
USP11-204ENST00000377107 ERVK-18Q9QC07 812 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 ANKRD33BA6NCL7 494 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 CFAP99D6REC4 459 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 UPK1AO00322 258 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 RECQL5O94762 991 aaPredicted RBP12.58□□□□□ -0.4
USP11-204ENST00000377107 EPN2O95208 641 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 CRATP43155 626 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 HKDC1Q2TB90 917 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 TBC1D25Q3MII6 688 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 Q6ZPB1 254 aaPredicted RBP12.58□□□□□ -0.4
USP11-204ENST00000377107 AHSA2Q719I0 299 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 DDX53Q86TM3 631 aaKnown RBP12.58□□□□□ -0.4
USP11-204ENST00000377107 RIMKLAQ8IXN7 391 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 SYTL1Q8IYJ3 562 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 SPARTQ8N0X7 666 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 ZNF558Q96NG5 402 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 SELENONQ9NZV5 590 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 INSL5Q9Y5Q6 135 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.58□□□□□ -0.4
USP11-204ENST00000377107 DYTNA2CJ06 578 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 GAPDHSO14556 408 aaPredicted RBP12.58□□□□□ -0.4
USP11-204ENST00000377107 ABCB7O75027 752 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 SCELO95171 688 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 HSMCR30P0CW71 290 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 SDC1P18827 310 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 CRHBPP24387 322 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 TTKP33981 857 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 VBP1P61758 197 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 SYT16Q17RD7 645 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 PAGE2BQ5JRK9 111 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 UTP15Q8TED0 518 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms