RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 VASPP50552 380 aaPredicted RBP19.67■□□□□ 0.74
VSX1-202ENST00000376709 CLDN8P56748 225 aa19.67■□□□□ 0.74
VSX1-202ENST00000376709 IRF8Q02556 426 aa19.67■□□□□ 0.74
VSX1-202ENST00000376709 TMEM115Q12893 351 aaPredicted RBP19.67■□□□□ 0.74
VSX1-202ENST00000376709 KCNC3Q14003 757 aa19.67■□□□□ 0.74
VSX1-202ENST00000376709 ATP6AP1Q15904 470 aa19.67■□□□□ 0.74
VSX1-202ENST00000376709 MFSD2AQ8NA29 543 aa19.67■□□□□ 0.74
VSX1-202ENST00000376709 ST13P5Q8NFI4 369 aaPredicted RBP19.67■□□□□ 0.74
VSX1-202ENST00000376709 FIG4Q92562 907 aa19.67■□□□□ 0.74
VSX1-202ENST00000376709 CMTM7Q96FZ5 175 aa19.67■□□□□ 0.74
VSX1-202ENST00000376709 TSSK3Q96PN8 268 aa19.67■□□□□ 0.74
VSX1-202ENST00000376709 A0A1B0GTW7 788 aa19.66■□□□□ 0.74
VSX1-202ENST00000376709 SMIM31A0A1B0GVY4 71 aa19.66■□□□□ 0.74
VSX1-202ENST00000376709 HOXC11O43248 304 aaPredicted RBP19.66■□□□□ 0.74
VSX1-202ENST00000376709 PSIP1O75475 530 aaKnown RBP19.66■□□□□ 0.74
VSX1-202ENST00000376709 CDH1P12830 882 aa19.66■□□□□ 0.74
VSX1-202ENST00000376709 ETS2P15036 469 aa19.66■□□□□ 0.74
VSX1-202ENST00000376709 PRLHRP49683 370 aa19.66■□□□□ 0.74
VSX1-202ENST00000376709 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.66■□□□□ 0.74
VSX1-202ENST00000376709 TNIP2Q8NFZ5 429 aa19.66■□□□□ 0.74
VSX1-202ENST00000376709 TFAP2CQ92754 450 aa19.66■□□□□ 0.74
VSX1-202ENST00000376709 MED8Q96G25 268 aa19.66■□□□□ 0.74
VSX1-202ENST00000376709 VPS50Q96JG6 964 aa19.66■□□□□ 0.74
VSX1-202ENST00000376709 SLC25A37Q9NYZ2 338 aa19.66■□□□□ 0.74
VSX1-202ENST00000376709 TMED5Q9Y3A6 229 aa19.66■□□□□ 0.74
VSX1-202ENST00000376709 NUP210Q8TEM1 1887 aaPredicted RBP19.66■□□□□ 0.74
VSX1-202ENST00000376709 PRAMEF4O60810 478 aa19.66■□□□□ 0.74
VSX1-202ENST00000376709 RASAL1O95294 804 aa19.66■□□□□ 0.74
VSX1-202ENST00000376709 PRNPP04156 253 aa19.66■□□□□ 0.74
VSX1-202ENST00000376709 JUPP14923 745 aa19.66■□□□□ 0.74
VSX1-202ENST00000376709 PRPH2P23942 346 aa19.66■□□□□ 0.74
VSX1-202ENST00000376709 PBLDP30039 288 aaPredicted RBP19.66■□□□□ 0.74
VSX1-202ENST00000376709 S100A3P33764 101 aa19.66■□□□□ 0.74
VSX1-202ENST00000376709 PRAMEF9Q5VWM5 478 aa19.66■□□□□ 0.74
VSX1-202ENST00000376709 GALNT15Q8N3T1 639 aa19.66■□□□□ 0.74
VSX1-202ENST00000376709 METTL25Q8N6Q8 603 aa19.66■□□□□ 0.74
VSX1-202ENST00000376709 ATL1Q8WXF7 558 aa19.66■□□□□ 0.74
VSX1-202ENST00000376709 GLMNQ92990 594 aa19.66■□□□□ 0.74
VSX1-202ENST00000376709 APIPQ96GX9 242 aa19.66■□□□□ 0.74
VSX1-202ENST00000376709 APOLD1Q96LR9 279 aa19.66■□□□□ 0.74
VSX1-202ENST00000376709 CCDC115Q96NT0 180 aa19.66■□□□□ 0.74
VSX1-202ENST00000376709 CCM2Q9BSQ5 444 aa19.66■□□□□ 0.74
VSX1-202ENST00000376709 IKZF5Q9H5V7 419 aa19.66■□□□□ 0.74
VSX1-202ENST00000376709 C8orf4Q9NR00 106 aa19.66■□□□□ 0.74
VSX1-202ENST00000376709 PNPLA3Q9NST1 481 aa19.66■□□□□ 0.74
VSX1-202ENST00000376709 INVSQ9Y283 1065 aa19.66■□□□□ 0.74
VSX1-202ENST00000376709 SLC27A6Q9Y2P4 619 aa19.66■□□□□ 0.74
VSX1-202ENST00000376709 CATP04040 527 aaKnown RBP19.65■□□□□ 0.74
VSX1-202ENST00000376709 NELFEP18615 380 aaKnown RBP19.65■□□□□ 0.74
VSX1-202ENST00000376709 SDC1P18827 310 aa19.65■□□□□ 0.74
VSX1-202ENST00000376709 MAP7Q14244 749 aa19.65■□□□□ 0.74
VSX1-202ENST00000376709 FAM98BQ52LJ0 330 aaKnown RBP19.65■□□□□ 0.74
VSX1-202ENST00000376709 FNDC3BQ53EP0 1204 aaKnown RBP19.65■□□□□ 0.74
VSX1-202ENST00000376709 XKR6Q5GH73 641 aa19.65■□□□□ 0.74
VSX1-202ENST00000376709 PDE12Q6L8Q7 609 aaKnown RBP19.65■□□□□ 0.74
VSX1-202ENST00000376709 TMEM220Q6QAJ8 160 aa19.65■□□□□ 0.74
VSX1-202ENST00000376709 THOC6Q86W42 341 aaKnown RBP19.65■□□□□ 0.74
VSX1-202ENST00000376709 MSRB3Q8IXL7 192 aa19.65■□□□□ 0.74
VSX1-202ENST00000376709 NRSN1Q8IZ57 195 aa19.65■□□□□ 0.74
VSX1-202ENST00000376709 LILRA3Q8N6C8 439 aaPredicted RBP19.65■□□□□ 0.74
VSX1-202ENST00000376709 NXPE3Q969Y0 559 aa19.65■□□□□ 0.74
VSX1-202ENST00000376709 ZFYVE19Q96K21 471 aa19.65■□□□□ 0.74
VSX1-202ENST00000376709 BDH2Q9BUT1 245 aa19.65■□□□□ 0.74
VSX1-202ENST00000376709 GRIP2Q9C0E4 1043 aa19.65■□□□□ 0.74
VSX1-202ENST00000376709 RMND5AQ9H871 391 aa19.65■□□□□ 0.74
VSX1-202ENST00000376709 NDUFA13Q9P0J0 144 aa19.65■□□□□ 0.74
VSX1-202ENST00000376709 CIDEBQ9UHD4 219 aa19.65■□□□□ 0.74
VSX1-202ENST00000376709 EI24O14681 340 aa19.64■□□□□ 0.74
VSX1-202ENST00000376709 AREL1O15033 823 aa19.64■□□□□ 0.74
VSX1-202ENST00000376709 POU2F2P09086 479 aa19.64■□□□□ 0.74
VSX1-202ENST00000376709 TACR1P25103 407 aa19.64■□□□□ 0.74
VSX1-202ENST00000376709 METAP1P53582 386 aa19.64■□□□□ 0.74
VSX1-202ENST00000376709 MESP2Q0VG99 397 aa19.64■□□□□ 0.74
VSX1-202ENST00000376709 PGS1Q32NB8 556 aa19.64■□□□□ 0.74
VSX1-202ENST00000376709 LIPJQ5W064 366 aa19.64■□□□□ 0.74
VSX1-202ENST00000376709 SPRED1Q7Z699 444 aa19.64■□□□□ 0.74
VSX1-202ENST00000376709 FAM47BQ8NA70 645 aa19.64■□□□□ 0.74
VSX1-202ENST00000376709 FOXJ1Q92949 421 aa19.64■□□□□ 0.74
VSX1-202ENST00000376709 CCDC138Q96M89 665 aa19.64■□□□□ 0.74
VSX1-202ENST00000376709 FOPNLQ96NB1 174 aa19.64■□□□□ 0.74
VSX1-202ENST00000376709 TBCDQ9BTW9 1192 aa19.64■□□□□ 0.74
VSX1-202ENST00000376709 ADI1Q9BV57 179 aa19.64■□□□□ 0.74
VSX1-202ENST00000376709 COQ6Q9Y2Z9 468 aa19.64■□□□□ 0.74
VSX1-202ENST00000376709 PRRT4C9JH25 899 aa19.64■□□□□ 0.73
VSX1-202ENST00000376709 PSMD11O00231 422 aa19.64■□□□□ 0.73
VSX1-202ENST00000376709 ACOX3O15254 700 aa19.64■□□□□ 0.73
VSX1-202ENST00000376709 UGDHO60701 494 aa19.64■□□□□ 0.73
VSX1-202ENST00000376709 LRATO95237 230 aa19.64■□□□□ 0.73
VSX1-202ENST00000376709 H6PDO95479 791 aa19.64■□□□□ 0.73
VSX1-202ENST00000376709 HLA-EP13747 358 aa19.64■□□□□ 0.73
VSX1-202ENST00000376709 ZNF23P17027 643 aa19.64■□□□□ 0.73
VSX1-202ENST00000376709 NRIP1P48552 1158 aa19.64■□□□□ 0.73
VSX1-202ENST00000376709 APOFQ13790 326 aa19.64■□□□□ 0.73
VSX1-202ENST00000376709 GTDC1Q4AE62 458 aa19.64■□□□□ 0.73
VSX1-202ENST00000376709 NADK2Q4G0N4 442 aa19.64■□□□□ 0.73
VSX1-202ENST00000376709 RUNDC3AQ59EK9 446 aa19.64■□□□□ 0.73
VSX1-202ENST00000376709 AGTRAPQ6RW13 159 aa19.64■□□□□ 0.73
VSX1-202ENST00000376709 GCNT7Q6ZNI0 430 aa19.64■□□□□ 0.73
VSX1-202ENST00000376709 RASGRP3Q8IV61 690 aa19.64■□□□□ 0.73
VSX1-202ENST00000376709 RNF175Q8N4F7 328 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms