RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 LRTM1Q9HBL6 345 aa17.16■□□□□ 0.34
CTTN-203ENST00000376561 MAP10Q9P2G4 905 aa17.16■□□□□ 0.34
CTTN-203ENST00000376561 ASF1AQ9Y294 204 aa17.16■□□□□ 0.34
CTTN-203ENST00000376561 SLC31A1O15431 190 aa17.16■□□□□ 0.34
CTTN-203ENST00000376561 IL12AP29459 219 aa17.16■□□□□ 0.34
CTTN-203ENST00000376561 ERFP50548 548 aa17.16■□□□□ 0.34
CTTN-203ENST00000376561 TBPL1P62380 186 aa17.16■□□□□ 0.34
CTTN-203ENST00000376561 PCDH1Q08174 1060 aa17.16■□□□□ 0.34
CTTN-203ENST00000376561 RCN1Q15293 331 aa17.16■□□□□ 0.34
CTTN-203ENST00000376561 MSANTD3Q96H12 275 aa17.16■□□□□ 0.34
CTTN-203ENST00000376561 ACTL8Q9H568 366 aa17.16■□□□□ 0.34
CTTN-203ENST00000376561 ITM2CQ9NQX7 267 aa17.16■□□□□ 0.34
CTTN-203ENST00000376561 CROTQ9UKG9 612 aa17.16■□□□□ 0.34
CTTN-203ENST00000376561 MMP17Q9ULZ9 603 aa17.16■□□□□ 0.34
CTTN-203ENST00000376561 PSMD13Q9UNM6 376 aa17.16■□□□□ 0.34
CTTN-203ENST00000376561 COLQQ9Y215 455 aaPredicted RBP17.16■□□□□ 0.34
CTTN-203ENST00000376561 A0A1W2PP18 115 aa17.15■□□□□ 0.34
CTTN-203ENST00000376561 KLHL33A6NCF5 533 aa17.15■□□□□ 0.34
CTTN-203ENST00000376561 E7ENX8 843 aa17.15■□□□□ 0.34
CTTN-203ENST00000376561 ANKRD28O15084 1053 aa17.15■□□□□ 0.34
CTTN-203ENST00000376561 SEC22BO75396 215 aa17.15■□□□□ 0.34
CTTN-203ENST00000376561 POLR2JP52435 117 aaKnown RBP17.15■□□□□ 0.34
CTTN-203ENST00000376561 DOC2AQ14183 400 aa17.15■□□□□ 0.34
CTTN-203ENST00000376561 COQ5Q5HYK3 327 aa17.15■□□□□ 0.34
CTTN-203ENST00000376561 CAPN13Q6MZZ7 669 aaPredicted RBP17.15■□□□□ 0.34
CTTN-203ENST00000376561 CHST15Q7LFX5 561 aaPredicted RBP17.15■□□□□ 0.34
CTTN-203ENST00000376561 ZFAND4Q86XD8 727 aa17.15■□□□□ 0.34
CTTN-203ENST00000376561 TFGQ92734 400 aaPredicted RBP17.15■□□□□ 0.34
CTTN-203ENST00000376561 MYOCQ99972 504 aa17.15■□□□□ 0.34
CTTN-203ENST00000376561 C1orf109Q9NX04 203 aa17.15■□□□□ 0.34
CTTN-203ENST00000376561 EIF3LQ9Y262 564 aaKnown RBP17.15■□□□□ 0.34
CTTN-203ENST00000376561 KCNE2Q9Y6J6 123 aa17.15■□□□□ 0.34
CTTN-203ENST00000376561 TCRBV21S2A2A0A5A6 115 aa17.15■□□□□ 0.34
CTTN-203ENST00000376561 FAM234BA2RU67 622 aa17.15■□□□□ 0.34
CTTN-203ENST00000376561 SOX1O00570 391 aaPredicted RBP17.15■□□□□ 0.34
CTTN-203ENST00000376561 CLGNO14967 610 aa17.15■□□□□ 0.34
CTTN-203ENST00000376561 CEACAM5P06731 702 aa17.15■□□□□ 0.34
CTTN-203ENST00000376561 SFSWAPQ12872 951 aaKnown RBP17.15■□□□□ 0.34
CTTN-203ENST00000376561 PRKG2Q13237 762 aa17.15■□□□□ 0.34
CTTN-203ENST00000376561 CCDC6Q16204 474 aa17.15■□□□□ 0.34
CTTN-203ENST00000376561 HABP4Q5JVS0 413 aaKnown RBP17.15■□□□□ 0.34
CTTN-203ENST00000376561 RNF148Q8N7C7 305 aa17.15■□□□□ 0.34
CTTN-203ENST00000376561 PHC3Q8NDX5 983 aa17.15■□□□□ 0.34
CTTN-203ENST00000376561 OR5AR1Q8NGP9 310 aa17.15■□□□□ 0.34
CTTN-203ENST00000376561 ASB12Q8WXK4 309 aa17.15■□□□□ 0.34
CTTN-203ENST00000376561 VPS33AQ96AX1 596 aa17.15■□□□□ 0.34
CTTN-203ENST00000376561 UHRF1Q96T88 793 aaPredicted RBP17.15■□□□□ 0.34
CTTN-203ENST00000376561 APOOQ9BUR5 198 aa17.15■□□□□ 0.34
CTTN-203ENST00000376561 SPAG4Q9NPE6 437 aa17.15■□□□□ 0.34
CTTN-203ENST00000376561 ADA2Q9NZK5 511 aa17.15■□□□□ 0.34
CTTN-203ENST00000376561 SLC17A4Q9Y2C5 497 aa17.15■□□□□ 0.34
CTTN-203ENST00000376561 SERTM1A2A2V5 107 aa17.14■□□□□ 0.33
CTTN-203ENST00000376561 RSL1D1O76021 490 aaKnown RBP17.14■□□□□ 0.33
CTTN-203ENST00000376561 SRFP11831 508 aa17.14■□□□□ 0.33
CTTN-203ENST00000376561 GNAZP19086 355 aa17.14■□□□□ 0.33
CTTN-203ENST00000376561 ME2P23368 584 aa17.14■□□□□ 0.33
CTTN-203ENST00000376561 ACSL1P33121 698 aa17.14■□□□□ 0.33
CTTN-203ENST00000376561 TAP2Q03519 686 aa17.14■□□□□ 0.33
CTTN-203ENST00000376561 DMPKQ09013 629 aa17.14■□□□□ 0.33
CTTN-203ENST00000376561 CCNIQ14094 377 aa17.14■□□□□ 0.33
CTTN-203ENST00000376561 KIAA0040Q15053 153 aa17.14■□□□□ 0.33
CTTN-203ENST00000376561 GRHL2Q6ISB3 625 aa17.14■□□□□ 0.33
CTTN-203ENST00000376561 LRRC56Q8IYG6 542 aaPredicted RBP17.14■□□□□ 0.33
CTTN-203ENST00000376561 RAD51AP1Q96B01 352 aa17.14■□□□□ 0.33
CTTN-203ENST00000376561 SGPP1Q9BX95 441 aa17.14■□□□□ 0.33
CTTN-203ENST00000376561 SLC2A4RGQ9NR83 387 aa17.14■□□□□ 0.33
CTTN-203ENST00000376561 ASIC5Q9NY37 505 aa17.14■□□□□ 0.33
CTTN-203ENST00000376561 GPRC5BQ9NZH0 403 aa17.14■□□□□ 0.33
CTTN-203ENST00000376561 ASPDHA6ND91 283 aa17.13■□□□□ 0.33
CTTN-203ENST00000376561 CCDC154A6NI56 674 aa17.13■□□□□ 0.33
CTTN-203ENST00000376561 ACP5P13686 325 aa17.13■□□□□ 0.33
CTTN-203ENST00000376561 GABRG2P18507 467 aa17.13■□□□□ 0.33
CTTN-203ENST00000376561 XRCC1P18887 633 aaPredicted RBP17.13■□□□□ 0.33
CTTN-203ENST00000376561 HNF4AP41235 474 aa17.13■□□□□ 0.33
CTTN-203ENST00000376561 TPMTP51580 245 aa17.13■□□□□ 0.33
CTTN-203ENST00000376561 SMAD2Q15796 467 aaKnown RBP17.13■□□□□ 0.33
CTTN-203ENST00000376561 DCUN1D3Q8IWE4 304 aa17.13■□□□□ 0.33
CTTN-203ENST00000376561 LMNTD1Q8N9Z9 388 aa17.13■□□□□ 0.33
CTTN-203ENST00000376561 WDR20Q8TBZ3 569 aa17.13■□□□□ 0.33
CTTN-203ENST00000376561 NEIL2Q969S2 332 aa17.13■□□□□ 0.33
CTTN-203ENST00000376561 SLC39A3Q9BRY0 314 aa17.13■□□□□ 0.33
CTTN-203ENST00000376561 RMI1Q9H9A7 625 aa17.13■□□□□ 0.33
CTTN-203ENST00000376561 ACSL5Q9ULC5 683 aa17.13■□□□□ 0.33
CTTN-203ENST00000376561 NDRG2Q9UN36 371 aaKnown RBP17.13■□□□□ 0.33
CTTN-203ENST00000376561 CACNB4O00305 520 aaPredicted RBP17.13■□□□□ 0.33
CTTN-203ENST00000376561 IFRD1O00458 451 aaPredicted RBP17.13■□□□□ 0.33
CTTN-203ENST00000376561 EEDO75530 441 aaKnown RBP17.13■□□□□ 0.33
CTTN-203ENST00000376561 NPPBP16860 134 aa17.13■□□□□ 0.33
CTTN-203ENST00000376561 JAK1P23458 1154 aa17.13■□□□□ 0.33
CTTN-203ENST00000376561 PRPH2P23942 346 aa17.13■□□□□ 0.33
CTTN-203ENST00000376561 RPL10P27635 214 aaKnown RBP17.13■□□□□ 0.33
CTTN-203ENST00000376561 MSX2P35548 267 aaPredicted RBP17.13■□□□□ 0.33
CTTN-203ENST00000376561 PNLIPRP1P54315 467 aa17.13■□□□□ 0.33
CTTN-203ENST00000376561 ZNF33BQ06732 778 aa17.13■□□□□ 0.33
CTTN-203ENST00000376561 E2F2Q14209 437 aa17.13■□□□□ 0.33
CTTN-203ENST00000376561 PTGR1Q14914 329 aa17.13■□□□□ 0.33
CTTN-203ENST00000376561 CACHD1Q5VU97 1274 aa17.13■□□□□ 0.33
CTTN-203ENST00000376561 JADE3Q92613 823 aa17.13■□□□□ 0.33
CTTN-203ENST00000376561 LRCH3Q96II8 777 aa17.13■□□□□ 0.33
CTTN-203ENST00000376561 GPATCH1Q9BRR8 931 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms