RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 C1orf109Q9NX04 203 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 UBA2Q9UBT2 640 aaPredicted RBP13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 ZNF490Q9ULM2 529 aaPredicted RBP13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 GREB1Q4ZG55 1949 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 TYMPP19971 482 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 MAGP20916 626 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 SERPINB10P48595 397 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 SYT6Q5T7P8 510 aaPredicted RBP13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 ZNF551Q7Z340 670 aaPredicted RBP13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 SLC22A15Q8IZD6 547 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 EGFL8Q99944 293 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 C11orf49Q9H6J7 331 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 EPS8L2Q9H6S3 715 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 ANKMY1Q9P2S6 941 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 PCDHB8Q9UN66 801 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 TPRKBQ9Y3C4 175 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 ANGPTL3Q9Y5C1 460 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 TNPO3Q9Y5L0 923 aaKnown RBP13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 TRBV5-3A0A0A0MS03 114 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 ANKRD66B4E2M5 251 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 hCG_2039718K7EN88 272 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 INPPL1O15357 1258 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 S100BP04271 92 aaPredicted RBP13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 IL6P05231 212 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 ITGAMP11215 1152 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 CSF2RAP15509 400 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 CDKN2CP42773 168 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 GNPDA1P46926 289 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 SEPHS1P49903 392 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 ST13P50502 369 aaKnown RBP13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 GZMMP51124 257 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 BCL2A1Q16548 175 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 PHKG1Q16816 387 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 TMEM173Q86WV6 379 aaPredicted RBP13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 MINDY2Q8NBR6 621 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 LKAAEAR1Q8TD35 194 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 PHF10Q8WUB8 498 aaKnown RBP13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 STARD8Q92502 1023 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 SH3GL1Q99961 368 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 MIR1-1HGQ9H1L0 117 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 CLMPQ9H6B4 373 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 SIAEQ9HAT2 523 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 LRTM1Q9HBL6 345 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 ACOT13Q9NPJ3 140 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 LRFN2Q9ULH4 789 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 VPS9D1Q9Y2B5 631 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 DHRS7Q9Y394 339 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 GMPPBQ9Y5P6 360 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 ZFP37Q9Y6Q3 630 aaPredicted RBP13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 LOC730098B7Z3J9 87 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 F5H5T6 163 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 CBX4O00257 560 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 ULK1O75385 1050 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 CXCL10P02778 98 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 CLTBP09497 229 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 BCKDHAP12694 445 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 BMP1P13497 986 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 CD36P16671 472 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 JUNDP17535 347 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 CD40LGP29965 261 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 CLCN4P51793 760 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 SLC14A1Q13336 389 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 IL18R1Q13478 541 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 SYT16Q17RD7 645 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 ZC3H12BQ5HYM0 836 aaKnown RBP13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 CACHD1Q5VU97 1274 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 SHQ1Q6PI26 577 aaKnown RBP13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 CALHM3Q86XJ0 350 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 CLDN19Q8N6F1 224 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 C8orf48Q96LL4 319 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 DACH2Q96NX9 599 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 CPPED1Q9BRF8 314 aaPredicted RBP13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 BOCQ9BWV1 1114 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 CIPCQ9C0C6 399 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 ABCG8Q9H221 673 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 DSN1Q9H410 356 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 MAGIXQ9H6Y5 334 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 SCN3BQ9NY72 215 aa13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 AGO1Q9UL18 857 aaKnown RBP13.77□□□□□ -0.21
CLCNKA-202ENST00000375692 TBKBP1A7MCY6 615 aa13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 FAM20BO75063 409 aa13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 IGLV3-27P01718 113 aa13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 ESR1P03372 595 aa13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 ACRP10323 421 aa13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 EN2P19622 333 aaPredicted RBP13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 CR2P20023 1033 aa13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 PTGER3P43115 390 aa13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 NKX2-5P52952 324 aaPredicted RBP13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 RFX4Q33E94 735 aa13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 LINGO4Q6UY18 593 aa13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 MBOAT1Q6ZNC8 495 aa13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 PLD3Q8IV08 490 aa13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 PLPP6Q8IY26 295 aa13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 OR52E4Q8NGH9 312 aa13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 RHOXF1Q8NHV9 184 aa13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 EID2BQ96D98 161 aa13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 FAM193BQ96PV7 902 aaPredicted RBP13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 P2RY12Q9H244 342 aa13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 SERHLQ9NQF3 203 aa13.76□□□□□ -0.21
CLCNKA-202ENST00000375692 DLGAP4Q9Y2H0 992 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms