RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 CCNDBP1O95273 360 aa20.63■□□□□ 0.89
UPF3A-202ENST00000375299 DLGAP3O95886 979 aa20.63■□□□□ 0.89
UPF3A-202ENST00000375299 CR2P20023 1033 aa20.63■□□□□ 0.89
UPF3A-202ENST00000375299 FPR1P21462 350 aa20.63■□□□□ 0.89
UPF3A-202ENST00000375299 DNAJA1P31689 397 aaKnown RBP20.63■□□□□ 0.89
UPF3A-202ENST00000375299 GRK4P32298 578 aa20.63■□□□□ 0.89
UPF3A-202ENST00000375299 C10orf120Q5SQS8 335 aa20.63■□□□□ 0.89
UPF3A-202ENST00000375299 AHSA2Q719I0 299 aa20.63■□□□□ 0.89
UPF3A-202ENST00000375299 RGL4Q8IZJ4 473 aa20.63■□□□□ 0.89
UPF3A-202ENST00000375299 CFAP52Q8N1V2 620 aa20.63■□□□□ 0.89
UPF3A-202ENST00000375299 TPK1Q9H3S4 243 aa20.63■□□□□ 0.89
UPF3A-202ENST00000375299 IL1RAPQ9NPH3 570 aa20.63■□□□□ 0.89
UPF3A-202ENST00000375299 OLA1Q9NTK5 396 aaKnown RBP20.63■□□□□ 0.89
UPF3A-202ENST00000375299 ASNA1O43681 348 aa20.63■□□□□ 0.89
UPF3A-202ENST00000375299 PPP3CCP48454 512 aa20.63■□□□□ 0.89
UPF3A-202ENST00000375299 SEPHS1P49903 392 aa20.63■□□□□ 0.89
UPF3A-202ENST00000375299 SGO1Q5FBB7 561 aa20.63■□□□□ 0.89
UPF3A-202ENST00000375299 KIAA1614Q5VZ46 1190 aa20.63■□□□□ 0.89
UPF3A-202ENST00000375299 GDF6Q6KF10 455 aaPredicted RBP20.63■□□□□ 0.89
UPF3A-202ENST00000375299 STK40Q8N2I9 435 aa20.63■□□□□ 0.89
UPF3A-202ENST00000375299 TTC16Q8NEE8 873 aa20.63■□□□□ 0.89
UPF3A-202ENST00000375299 MOV10Q9HCE1 1003 aaKnown RBP20.63■□□□□ 0.89
UPF3A-202ENST00000375299 PDP1Q9P0J1 537 aaPredicted RBP20.63■□□□□ 0.89
UPF3A-202ENST00000375299 PSMD11O00231 422 aa20.62■□□□□ 0.89
UPF3A-202ENST00000375299 ZNF623O75123 536 aa20.62■□□□□ 0.89
UPF3A-202ENST00000375299 PARNO95453 639 aaKnown RBP20.62■□□□□ 0.89
UPF3A-202ENST00000375299 HOXB9P17482 250 aaPredicted RBP20.62■□□□□ 0.89
UPF3A-202ENST00000375299 FKBP1BP68106 108 aa20.62■□□□□ 0.89
UPF3A-202ENST00000375299 PROX2Q3B8N5 592 aa20.62■□□□□ 0.89
UPF3A-202ENST00000375299 MYOCQ99972 504 aa20.62■□□□□ 0.89
UPF3A-202ENST00000375299 INPP5KQ9BT40 448 aa20.62■□□□□ 0.89
UPF3A-202ENST00000375299 MAGEH1Q9H213 219 aa20.62■□□□□ 0.89
UPF3A-202ENST00000375299 RASSF1Q9NS23 344 aa20.62■□□□□ 0.89
UPF3A-202ENST00000375299 GPR39O43194 453 aa20.61■□□□□ 0.89
UPF3A-202ENST00000375299 AIREO43918 545 aa20.61■□□□□ 0.89
UPF3A-202ENST00000375299 PTTG1O95997 202 aa20.61■□□□□ 0.89
UPF3A-202ENST00000375299 BCKDHAP12694 445 aa20.61■□□□□ 0.89
UPF3A-202ENST00000375299 EPHA2P29317 976 aa20.61■□□□□ 0.89
UPF3A-202ENST00000375299 CCDC71Q8IV32 467 aaPredicted RBP20.61■□□□□ 0.89
UPF3A-202ENST00000375299 FCGR1BQ92637 280 aa20.61■□□□□ 0.89
UPF3A-202ENST00000375299 FBXO32Q969P5 355 aa20.61■□□□□ 0.89
UPF3A-202ENST00000375299 SYT17Q9BSW7 474 aa20.61■□□□□ 0.89
UPF3A-202ENST00000375299 KRT84Q9NSB2 600 aa20.61■□□□□ 0.89
UPF3A-202ENST00000375299 KIF17Q9P2E2 1029 aa20.61■□□□□ 0.89
UPF3A-202ENST00000375299 TRPS1Q9UHF7 1281 aa20.61■□□□□ 0.89
UPF3A-202ENST00000375299 OARD1Q9Y530 152 aa20.61■□□□□ 0.89
UPF3A-202ENST00000375299 H7C0S8 307 aa20.61■□□□□ 0.89
UPF3A-202ENST00000375299 WBP4O75554 376 aaKnown RBP20.61■□□□□ 0.89
UPF3A-202ENST00000375299 S100A3P33764 101 aa20.61■□□□□ 0.89
UPF3A-202ENST00000375299 LIPAP38571 399 aa20.61■□□□□ 0.89
UPF3A-202ENST00000375299 GDF5P43026 501 aa20.61■□□□□ 0.89
UPF3A-202ENST00000375299 RPS14P62263 151 aaKnown RBP20.61■□□□□ 0.89
UPF3A-202ENST00000375299 IFITM2Q01629 132 aa20.61■□□□□ 0.89
UPF3A-202ENST00000375299 SYT16Q17RD7 645 aa20.61■□□□□ 0.89
UPF3A-202ENST00000375299 GPR152Q8TDT2 470 aa20.61■□□□□ 0.89
UPF3A-202ENST00000375299 FUBP3Q96I24 572 aaKnown RBP eCLIP20.61■□□□□ 0.89
UPF3A-202ENST00000375299 PITX2Q99697 317 aa20.61■□□□□ 0.89
UPF3A-202ENST00000375299 EGFL8Q99944 293 aa20.61■□□□□ 0.89
UPF3A-202ENST00000375299 SPON2Q9BUD6 331 aa20.61■□□□□ 0.89
UPF3A-202ENST00000375299 PCDHGC4Q9Y5F7 938 aa20.61■□□□□ 0.89
UPF3A-202ENST00000375299 RAI2Q9Y5P3 530 aa20.61■□□□□ 0.89
UPF3A-202ENST00000375299 MICAL3Q7RTP6 2002 aa20.61■□□□□ 0.89
UPF3A-202ENST00000375299 PLXNA4Q9HCM2 1894 aa20.61■□□□□ 0.89
UPF3A-202ENST00000375299 F5H5T6 163 aa20.6■□□□□ 0.89
UPF3A-202ENST00000375299 MANBAO00462 879 aa20.6■□□□□ 0.89
UPF3A-202ENST00000375299 DYRK3O43781 588 aa20.6■□□□□ 0.89
UPF3A-202ENST00000375299 FABP3P05413 133 aa20.6■□□□□ 0.89
UPF3A-202ENST00000375299 SPNP16150 400 aa20.6■□□□□ 0.89
UPF3A-202ENST00000375299 TCEA1P23193 301 aaKnown RBP20.6■□□□□ 0.89
UPF3A-202ENST00000375299 PTPN6P29350 595 aa20.6■□□□□ 0.89
UPF3A-202ENST00000375299 ANKRD46Q86W74 232 aa20.6■□□□□ 0.89
UPF3A-202ENST00000375299 HORMAD1Q86X24 394 aa20.6■□□□□ 0.89
UPF3A-202ENST00000375299 ELMOD1Q8N336 334 aa20.6■□□□□ 0.89
UPF3A-202ENST00000375299 FAM83FQ8NEG4 500 aaPredicted RBP20.6■□□□□ 0.89
UPF3A-202ENST00000375299 PROX1Q92786 737 aa20.6■□□□□ 0.89
UPF3A-202ENST00000375299 CD244Q9BZW8 370 aa20.6■□□□□ 0.89
UPF3A-202ENST00000375299 C6orf62Q9GZU0 229 aaPredicted RBP20.6■□□□□ 0.89
UPF3A-202ENST00000375299 NACA2Q9H009 215 aa20.6■□□□□ 0.89
UPF3A-202ENST00000375299 WWOXQ9NZC7 414 aa20.6■□□□□ 0.89
UPF3A-202ENST00000375299 PCDHB1Q9Y5F3 818 aa20.6■□□□□ 0.89
UPF3A-202ENST00000375299 GOLGA8CPA6NN73 597 aa20.6■□□□□ 0.89
UPF3A-202ENST00000375299 ANKRD66B4E2M5 251 aa20.6■□□□□ 0.89
UPF3A-202ENST00000375299 hCG_2039718K7EN88 272 aa20.6■□□□□ 0.89
UPF3A-202ENST00000375299 DIRAS1O95057 198 aa20.6■□□□□ 0.89
UPF3A-202ENST00000375299 CDKN2CP42773 168 aa20.6■□□□□ 0.89
UPF3A-202ENST00000375299 PTPRRQ15256 657 aa20.6■□□□□ 0.89
UPF3A-202ENST00000375299 C6orf183Q5T699 404 aa20.6■□□□□ 0.89
UPF3A-202ENST00000375299 THOC7Q6I9Y2 204 aaKnown RBP20.6■□□□□ 0.89
UPF3A-202ENST00000375299 PNCKQ6P2M8 343 aa20.6■□□□□ 0.89
UPF3A-202ENST00000375299 CXCL17Q6UXB2 119 aa20.6■□□□□ 0.89
UPF3A-202ENST00000375299 ZNF551Q7Z340 670 aaPredicted RBP20.6■□□□□ 0.89
UPF3A-202ENST00000375299 APH1BQ8WW43 257 aa20.6■□□□□ 0.89
UPF3A-202ENST00000375299 CAPSLQ8WWF8 208 aa20.6■□□□□ 0.89
UPF3A-202ENST00000375299 UBE2FQ969M7 185 aa20.6■□□□□ 0.89
UPF3A-202ENST00000375299 ZNF486Q96H40 463 aaPredicted RBP20.6■□□□□ 0.89
UPF3A-202ENST00000375299 YME1L1Q96TA2 773 aa20.6■□□□□ 0.89
UPF3A-202ENST00000375299 FAM126AQ9BYI3 521 aaPredicted RBP20.6■□□□□ 0.89
UPF3A-202ENST00000375299 A3GALT2U3KPV4 340 aa20.6■□□□□ 0.89
UPF3A-202ENST00000375299 EBLN1P0CF75 366 aa20.59■□□□□ 0.89
UPF3A-202ENST00000375299 CASP3P42574 277 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms