RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 FATE1Q969F0 183 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 FUBP3Q96I24 572 aaKnown RBP eCLIP10.83□□□□□ -0.68
CCDC40-203ENST00000374877 CTRCQ99895 268 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 ZBED2Q9BTP6 218 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 EPS8L2Q9H6S3 715 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 PRDM8Q9NQV8 689 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 SLC6A13Q9NSD5 602 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 FARSBQ9NSD9 589 aaKnown RBP10.83□□□□□ -0.68
CCDC40-203ENST00000374877 PRKAG2Q9UGJ0 569 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 ANGPTL3Q9Y5C1 460 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 C2orf81A6NN90 581 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 M0QX08 132 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 RECQL5O94762 991 aaPredicted RBP10.83□□□□□ -0.68
CCDC40-203ENST00000374877 EIF2DP41214 584 aaKnown RBP10.83□□□□□ -0.68
CCDC40-203ENST00000374877 NR4A2P43354 598 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 SMARCB1Q12824 385 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 FKBP9P1Q75LS8 142 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 NANOGNBQ7Z5D8 188 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 GPR149Q86SP6 731 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 ANKRD46Q86W74 232 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 CFAP52Q8N1V2 620 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 C10orf111Q8N326 155 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 CLIP4Q8N3C7 705 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 SVOPQ8N4V2 548 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 LPCAT1Q8NF37 534 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 SPON2Q9BUD6 331 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 BTBD2Q9BX70 525 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 DCSTAMPQ9H295 470 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 DUSP21Q9H596 190 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 ACOT13Q9NPJ3 140 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 SEC22BO75396 215 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 OTCP00480 354 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 ITGAMP11215 1152 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 CLK3P49761 638 aaKnown RBP10.83□□□□□ -0.68
CCDC40-203ENST00000374877 ARHGDIAP52565 204 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 HNRNPFP52597 415 aaKnown RBP10.83□□□□□ -0.68
CCDC40-203ENST00000374877 PARP15Q460N3 678 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 FAM171A1Q5VUB5 890 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 CPZQ66K79 652 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 CEP68Q76N32 757 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 CYP2U1Q7Z449 544 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 MON1AQ86VX9 555 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 PYURFQ96I23 114 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 NSUN3Q9H649 340 aaKnown RBP10.83□□□□□ -0.68
CCDC40-203ENST00000374877 ZBTB20Q9HC78 741 aaPredicted RBP10.83□□□□□ -0.68
CCDC40-203ENST00000374877 NUDT4Q9NZJ9 180 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.83□□□□□ -0.68
CCDC40-203ENST00000374877 A0A0D9SEW6 157 aa10.82□□□□□ -0.68
CCDC40-203ENST00000374877 ASNA1O43681 348 aa10.82□□□□□ -0.68
CCDC40-203ENST00000374877 PRAMEF11O60813 436 aa10.82□□□□□ -0.68
CCDC40-203ENST00000374877 UPK1BO75841 260 aa10.82□□□□□ -0.68
CCDC40-203ENST00000374877 RETP07949 1114 aa10.82□□□□□ -0.68
CCDC40-203ENST00000374877 ITGB6P18564 788 aa10.82□□□□□ -0.68
CCDC40-203ENST00000374877 GDF5P43026 501 aa10.82□□□□□ -0.68
CCDC40-203ENST00000374877 TRAF3Q13114 568 aa10.82□□□□□ -0.68
CCDC40-203ENST00000374877 PTPRRQ15256 657 aa10.82□□□□□ -0.68
CCDC40-203ENST00000374877 RUNDC3AQ59EK9 446 aa10.82□□□□□ -0.68
CCDC40-203ENST00000374877 CARD16Q5EG05 197 aa10.82□□□□□ -0.68
CCDC40-203ENST00000374877 CACHD1Q5VU97 1274 aa10.82□□□□□ -0.68
CCDC40-203ENST00000374877 LYSMD2Q8IV50 215 aa10.82□□□□□ -0.68
CCDC40-203ENST00000374877 UBE2FQ969M7 185 aa10.82□□□□□ -0.68
CCDC40-203ENST00000374877 MYEOVQ96EZ4 313 aa10.82□□□□□ -0.68
CCDC40-203ENST00000374877 APOL4Q9BPW4 351 aa10.82□□□□□ -0.68
CCDC40-203ENST00000374877 APOL5Q9BWW9 433 aa10.82□□□□□ -0.68
CCDC40-203ENST00000374877 GPR62Q9BZJ7 368 aa10.82□□□□□ -0.68
CCDC40-203ENST00000374877 CPNE5Q9HCH3 593 aa10.82□□□□□ -0.68
CCDC40-203ENST00000374877 C1orf109Q9NX04 203 aa10.82□□□□□ -0.68
CCDC40-203ENST00000374877 KIF17Q9P2E2 1029 aa10.82□□□□□ -0.68
CCDC40-203ENST00000374877 hCG_2039718K7EN88 272 aa10.82□□□□□ -0.68
CCDC40-203ENST00000374877 RGS14O43566 566 aa10.82□□□□□ -0.68
CCDC40-203ENST00000374877 DBTP11182 482 aaKnown RBP10.82□□□□□ -0.68
CCDC40-203ENST00000374877 LAG3P18627 525 aa10.82□□□□□ -0.68
CCDC40-203ENST00000374877 EPHA2P29317 976 aa10.82□□□□□ -0.68
CCDC40-203ENST00000374877 RGRP47804 291 aa10.82□□□□□ -0.68
CCDC40-203ENST00000374877 TTPAP49638 278 aa10.82□□□□□ -0.68
CCDC40-203ENST00000374877 ZC3H12BQ5HYM0 836 aaKnown RBP10.82□□□□□ -0.68
CCDC40-203ENST00000374877 ANKS3Q6ZW76 656 aa10.82□□□□□ -0.68
CCDC40-203ENST00000374877 TTC29Q8NA56 475 aaPredicted RBP10.82□□□□□ -0.68
CCDC40-203ENST00000374877 PYCR2Q96C36 320 aa10.82□□□□□ -0.68
CCDC40-203ENST00000374877 EGFL8Q99944 293 aa10.82□□□□□ -0.68
CCDC40-203ENST00000374877 TPK1Q9H3S4 243 aa10.82□□□□□ -0.68
CCDC40-203ENST00000374877 ITM2CQ9NQX7 267 aa10.82□□□□□ -0.68
CCDC40-203ENST00000374877 THG1LQ9NWX6 298 aaKnown RBP10.82□□□□□ -0.68
CCDC40-203ENST00000374877 ABCG2Q9UNQ0 655 aa10.82□□□□□ -0.68
CCDC40-203ENST00000374877 VPS9D1Q9Y2B5 631 aa10.82□□□□□ -0.68
CCDC40-203ENST00000374877 SLC12A8A0AV02 714 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 PGLSO95336 258 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 ACVR2AP27037 513 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 GTF2E2P29084 291 aaKnown RBP10.81□□□□□ -0.68
CCDC40-203ENST00000374877 MAGEA11P43364 429 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 NRIP1P48552 1158 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 DAPP51397 102 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 DEFB103AP81534 67 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 GBX1Q14549 363 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 STEAP3Q658P3 488 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 PSRC1Q6PGN9 363 aaPredicted RBP10.81□□□□□ -0.68
CCDC40-203ENST00000374877 SHQ1Q6PI26 577 aaKnown RBP10.81□□□□□ -0.68
CCDC40-203ENST00000374877 SYTL1Q8IYJ3 562 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 OR7D4Q8NG98 312 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 C2orf15Q8WU43 125 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms