RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 CPPED1Q9BRF8 314 aaPredicted RBP13.6□□□□□ -0.23
HMGCL-203ENST00000374490 H2AFJQ9BTM1 129 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 SLC12A9Q9BXP2 914 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 CPEB1Q9BZB8 566 aaKnown RBP13.6□□□□□ -0.23
HMGCL-203ENST00000374490 CEP44Q9C0F1 390 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 ING2Q9H160 280 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 POLR1BQ9H9Y6 1135 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 PARVBQ9HBI1 364 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 PLGRKTQ9HBL7 147 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 ARL15Q9NXU5 204 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 IFT80Q9P2H3 777 aaPredicted RBP13.6□□□□□ -0.23
HMGCL-203ENST00000374490 BLOC1S6Q9UL45 172 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 INVSQ9Y283 1065 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 HCN4Q9Y3Q4 1203 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 ANAPC1Q9H1A4 1944 aa13.59□□□□□ -0.23
HMGCL-203ENST00000374490 WNT9AO14904 365 aa13.59□□□□□ -0.23
HMGCL-203ENST00000374490 CST1P01037 141 aa13.59□□□□□ -0.23
HMGCL-203ENST00000374490 MT-ND1P03886 318 aa13.59□□□□□ -0.23
HMGCL-203ENST00000374490 BCKDHAP12694 445 aa13.59□□□□□ -0.23
HMGCL-203ENST00000374490 SOX11P35716 441 aa13.59□□□□□ -0.23
HMGCL-203ENST00000374490 BMPR1AP36894 532 aa13.59□□□□□ -0.23
HMGCL-203ENST00000374490 GDF5P43026 501 aa13.59□□□□□ -0.23
HMGCL-203ENST00000374490 RPIAP49247 311 aa13.59□□□□□ -0.23
HMGCL-203ENST00000374490 IL18R1Q13478 541 aa13.59□□□□□ -0.23
HMGCL-203ENST00000374490 BIRC2Q13490 618 aa13.59□□□□□ -0.23
HMGCL-203ENST00000374490 DPY19L1Q2PZI1 675 aa13.59□□□□□ -0.23
HMGCL-203ENST00000374490 PYCR3Q53H96 274 aa13.59□□□□□ -0.23
HMGCL-203ENST00000374490 TMEM31Q5JXX7 168 aa13.59□□□□□ -0.23
HMGCL-203ENST00000374490 PLEKHS1Q5SXH7 462 aa13.59□□□□□ -0.23
HMGCL-203ENST00000374490 TBPL2Q6SJ96 375 aa13.59□□□□□ -0.23
HMGCL-203ENST00000374490 KCTD8Q6ZWB6 473 aa13.59□□□□□ -0.23
HMGCL-203ENST00000374490 NEK10Q6ZWH5 1172 aa13.59□□□□□ -0.23
HMGCL-203ENST00000374490 PLPP6Q8IY26 295 aa13.59□□□□□ -0.23
HMGCL-203ENST00000374490 EID3Q8N140 333 aa13.59□□□□□ -0.23
HMGCL-203ENST00000374490 ZCCHC7Q8N3Z6 543 aaKnown RBP13.59□□□□□ -0.23
HMGCL-203ENST00000374490 L3MBTL4Q8NA19 623 aa13.59□□□□□ -0.23
HMGCL-203ENST00000374490 GPR26Q8NDV2 337 aa13.59□□□□□ -0.23
HMGCL-203ENST00000374490 SELENOMQ8WWX9 145 aa13.59□□□□□ -0.23
HMGCL-203ENST00000374490 FAM120BQ96EK7 910 aaKnown RBP13.59□□□□□ -0.23
HMGCL-203ENST00000374490 OSBPL10Q9BXB5 764 aa13.59□□□□□ -0.23
HMGCL-203ENST00000374490 SUV39H2Q9H5I1 410 aa13.59□□□□□ -0.23
HMGCL-203ENST00000374490 ELOVL6Q9H5J4 265 aa13.59□□□□□ -0.23
HMGCL-203ENST00000374490 EPHX3Q9H6B9 360 aa13.59□□□□□ -0.23
HMGCL-203ENST00000374490 ZFP14Q9HCL3 533 aa13.59□□□□□ -0.23
HMGCL-203ENST00000374490 CFAP97Q9P2B7 532 aa13.59□□□□□ -0.23
HMGCL-203ENST00000374490 OBSL1O75147 1896 aa13.58□□□□□ -0.23
HMGCL-203ENST00000374490 TRAV19A0A0A6YYK7 116 aa13.58□□□□□ -0.24
HMGCL-203ENST00000374490 NPIPB15A6NHN6 443 aaPredicted RBP13.58□□□□□ -0.24
HMGCL-203ENST00000374490 GNGT2O14610 69 aa13.58□□□□□ -0.24
HMGCL-203ENST00000374490 PRMT3O60678 531 aa13.58□□□□□ -0.24
HMGCL-203ENST00000374490 C8AP07357 584 aa13.58□□□□□ -0.24
HMGCL-203ENST00000374490 CYP2A7P20853 494 aa13.58□□□□□ -0.24
HMGCL-203ENST00000374490 AP1S2P56377 157 aa13.58□□□□□ -0.24
HMGCL-203ENST00000374490 ABHD18Q0P651 414 aa13.58□□□□□ -0.24
HMGCL-203ENST00000374490 RAB39AQ14964 217 aa13.58□□□□□ -0.24
HMGCL-203ENST00000374490 PLA2G4EQ3MJ16 856 aa13.58□□□□□ -0.24
HMGCL-203ENST00000374490 SGO1Q5FBB7 561 aa13.58□□□□□ -0.24
HMGCL-203ENST00000374490 DGKKQ5KSL6 1271 aa13.58□□□□□ -0.24
HMGCL-203ENST00000374490 PLPP4Q5VZY2 271 aa13.58□□□□□ -0.24
HMGCL-203ENST00000374490 C22orf39Q6P5X5 142 aa13.58□□□□□ -0.24
HMGCL-203ENST00000374490 UBE2R2Q712K3 238 aaPredicted RBP13.58□□□□□ -0.24
HMGCL-203ENST00000374490 HIPK1Q86Z02 1210 aa13.58□□□□□ -0.24
HMGCL-203ENST00000374490 MSRB3Q8IXL7 192 aa13.58□□□□□ -0.24
HMGCL-203ENST00000374490 ZNF557Q8N988 423 aaPredicted RBP13.58□□□□□ -0.24
HMGCL-203ENST00000374490 FBXO30Q8TB52 745 aa13.58□□□□□ -0.24
HMGCL-203ENST00000374490 FAM81AQ8TBF8 368 aa13.58□□□□□ -0.24
HMGCL-203ENST00000374490 EZH1Q92800 747 aaPredicted RBP13.58□□□□□ -0.24
HMGCL-203ENST00000374490 RPL10LQ96L21 214 aaKnown RBP13.58□□□□□ -0.24
HMGCL-203ENST00000374490 ACPTQ9BZG2 426 aa13.58□□□□□ -0.24
HMGCL-203ENST00000374490 PAIP1Q9H074 479 aaKnown RBP13.58□□□□□ -0.24
HMGCL-203ENST00000374490 TNKS2Q9H2K2 1166 aa13.58□□□□□ -0.24
HMGCL-203ENST00000374490 KAT8Q9H7Z6 458 aaKnown RBP13.58□□□□□ -0.24
HMGCL-203ENST00000374490 UBE2ZQ9H832 354 aaPredicted RBP13.58□□□□□ -0.24
HMGCL-203ENST00000374490 RAD18Q9NS91 495 aa13.58□□□□□ -0.24
HMGCL-203ENST00000374490 DCAF13Q9NV06 445 aaKnown RBP13.58□□□□□ -0.24
HMGCL-203ENST00000374490 SLC25A37Q9NYZ2 338 aa13.58□□□□□ -0.24
HMGCL-203ENST00000374490 ZNHIT2Q9UHR6 403 aa13.58□□□□□ -0.24
HMGCL-203ENST00000374490 PDE10AQ9Y233 779 aa13.58□□□□□ -0.24
HMGCL-203ENST00000374490 HS3ST2Q9Y278 367 aa13.58□□□□□ -0.24
HMGCL-203ENST00000374490 KCNE1BA0A087WTH5 132 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 TRIM64BA6NI03 449 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 CFAP99D6REC4 459 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 H0Y858 1186 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 GRM6O15303 877 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 UGDHO60701 494 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 ABCB7O75027 752 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 ZNF821O75541 412 aaPredicted RBP13.57□□□□□ -0.24
HMGCL-203ENST00000374490 DNAJB5O75953 348 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 POP4O95707 220 aaKnown RBP13.57□□□□□ -0.24
HMGCL-203ENST00000374490 CLIC3O95833 236 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 PDYNP01213 254 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 CKMP06732 381 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 SRCP12931 536 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 AOAHP28039 575 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 GABRR2P28476 465 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 CCR7P32248 378 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 SLC6A12P48065 614 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 TMBIM6P55061 237 aa13.57□□□□□ -0.24
HMGCL-203ENST00000374490 TPD52P55327 224 aaPredicted RBP13.57□□□□□ -0.24
HMGCL-203ENST00000374490 ABRQ12979 859 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms