RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 PABPC4LP0CB38 370 aaKnown RBP11.77□□□□□ -0.53
HMGCL-202ENST00000374487 MPC1LP0DKB6 136 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 SRFP11831 508 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 OR4D2P58180 307 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 SIGLEC14Q08ET2 396 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 ZNF284Q2VY69 593 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 POM121L1PQ3SYA9 428 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 MTSS1LQ765P7 747 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 CHERPQ8IWX8 916 aaKnown RBP11.77□□□□□ -0.53
HMGCL-202ENST00000374487 OR8J3Q8NGG0 315 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 BIRC7Q96CA5 298 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 P2RY13Q9BPV8 354 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 RIOK2Q9BVS4 552 aaKnown RBP11.77□□□□□ -0.53
HMGCL-202ENST00000374487 RPF2Q9H7B2 306 aaKnown RBP11.77□□□□□ -0.53
HMGCL-202ENST00000374487 SLC24A3Q9HC58 644 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 SMOXQ9NWM0 555 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 NDUFA13Q9P0J0 144 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 IL36AQ9UHA7 158 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 FBXL21Q9UKT6 434 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 V9GYQ6 96 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 SCN8AQ9UQD0 1980 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 SMIM31A0A1B0GVY4 71 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 TCRBV5S2A0A599 114 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 ARHGAP10A1A4S6 786 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 SOBPA7XYQ1 873 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 SLC16A5O15375 505 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 PGRP06401 933 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 SMIM18P0DKX4 95 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 TIMP2P16035 220 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 EPORP19235 508 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 MAP4P27816 1152 aaKnown RBP11.77□□□□□ -0.53
HMGCL-202ENST00000374487 CCT8P50990 548 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 NEK2P51955 445 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 AP1S2P56377 157 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 TXNL4AP83876 142 aaKnown RBP11.77□□□□□ -0.53
HMGCL-202ENST00000374487 SP140Q13342 867 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 GBX1Q14549 363 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 KIAA0040Q15053 153 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 PLA2G4EQ3MJ16 856 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 SPANXN4Q5MJ08 99 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 NAIF1Q69YI7 327 aaPredicted RBP11.77□□□□□ -0.53
HMGCL-202ENST00000374487 KRTCAP2Q8N6L1 136 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 BEND7Q8N7W2 519 aaPredicted RBP11.77□□□□□ -0.53
HMGCL-202ENST00000374487 FLCNQ8NFG4 579 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 CLHC1Q8NHS4 586 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 RNF145Q96MT1 663 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 OR52E6Q96RD3 313 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 SH3GL1Q99961 368 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 ZSCAN5AQ9BUG6 496 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 TRMT61BQ9BVS5 477 aaKnown RBP11.77□□□□□ -0.53
HMGCL-202ENST00000374487 ACPTQ9BZG2 426 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 MTG2Q9H4K7 406 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 TRPV4Q9HBA0 871 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 PAPOLBQ9NRJ5 636 aaKnown RBP11.77□□□□□ -0.53
HMGCL-202ENST00000374487 RAD18Q9NS91 495 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 OAZ3Q9UMX2 235 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 SLC22A14Q9Y267 594 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 MYOFQ9NZM1 2061 aa11.76□□□□□ -0.53
HMGCL-202ENST00000374487 ZNF106Q9H2Y7 1883 aaKnown RBP11.76□□□□□ -0.53
HMGCL-202ENST00000374487 GFYI3L273 518 aa11.76□□□□□ -0.53
HMGCL-202ENST00000374487 GSTA4O15217 222 aa11.76□□□□□ -0.53
HMGCL-202ENST00000374487 DFNA5O60443 496 aa11.76□□□□□ -0.53
HMGCL-202ENST00000374487 AP2A2O94973 939 aa11.76□□□□□ -0.53
HMGCL-202ENST00000374487 LDLRP01130 860 aa11.76□□□□□ -0.53
HMGCL-202ENST00000374487 FESP07332 822 aa11.76□□□□□ -0.53
HMGCL-202ENST00000374487 BCKDHAP12694 445 aa11.76□□□□□ -0.53
HMGCL-202ENST00000374487 ITPKAP23677 461 aa11.76□□□□□ -0.53
HMGCL-202ENST00000374487 HRH2P25021 359 aa11.76□□□□□ -0.53
HMGCL-202ENST00000374487 DCDC1P59894 354 aa11.76□□□□□ -0.53
HMGCL-202ENST00000374487 SELPLGQ14242 412 aa11.76□□□□□ -0.53
HMGCL-202ENST00000374487 CNPY1Q3B7I2 92 aa11.76□□□□□ -0.53
HMGCL-202ENST00000374487 SYTL3Q4VX76 610 aa11.76□□□□□ -0.53
HMGCL-202ENST00000374487 ZNF805Q5CZA5 627 aa11.76□□□□□ -0.53
HMGCL-202ENST00000374487 NHSL2Q5HYW2 709 aa11.76□□□□□ -0.53
HMGCL-202ENST00000374487 TMEM31Q5JXX7 168 aa11.76□□□□□ -0.53
HMGCL-202ENST00000374487 TMTC4Q5T4D3 741 aa11.76□□□□□ -0.53
HMGCL-202ENST00000374487 CARM1Q86X55 608 aa11.76□□□□□ -0.53
HMGCL-202ENST00000374487 GALNT13Q8IUC8 556 aa11.76□□□□□ -0.53
HMGCL-202ENST00000374487 AADATQ8N5Z0 425 aa11.76□□□□□ -0.53
HMGCL-202ENST00000374487 TRAM1L1Q8N609 369 aa11.76□□□□□ -0.53
HMGCL-202ENST00000374487 GTF2H4Q92759 462 aa11.76□□□□□ -0.53
HMGCL-202ENST00000374487 MRGPRX3Q96LB0 322 aa11.76□□□□□ -0.53
HMGCL-202ENST00000374487 FOXQ1Q9C009 403 aa11.76□□□□□ -0.53
HMGCL-202ENST00000374487 CLMPQ9H6B4 373 aa11.76□□□□□ -0.53
HMGCL-202ENST00000374487 DNAJC11Q9NVH1 559 aa11.76□□□□□ -0.53
HMGCL-202ENST00000374487 ASIC5Q9NY37 505 aa11.76□□□□□ -0.53
HMGCL-202ENST00000374487 VAPAQ9P0L0 249 aa11.76□□□□□ -0.53
HMGCL-202ENST00000374487 MYOCOSA0A1B0GUC4 107 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 C16orf96A6NNT2 1141 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 QSOX1O00391 747 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 CLGNO14967 610 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 AHCYL1O43865 530 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 TFAP2AP05549 437 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 GSTT1P30711 240 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 HALP42357 657 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 DGKGP49619 791 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 ST8SIA6P61647 398 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 RPS14P62263 151 aaKnown RBP11.75□□□□□ -0.53
HMGCL-202ENST00000374487 MAP7Q14244 749 aa11.75□□□□□ -0.53
HMGCL-202ENST00000374487 USP39Q53GS9 565 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms