RNA–Protein interactions for RNA: ENST00000374466.3

CSGALNACT2-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT2-201ENST00000374466 NR1D1P20393 614 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 HNF4AP41235 474 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 RCN2Q14257 317 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 KANK2Q63ZY3 851 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 CRTC3Q6UUV7 619 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 TRIM46Q7Z4K8 759 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 OTUD6BQ8N6M0 293 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 OR2A1Q8NGT9 310 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 GDAP1Q8TB36 358 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 LIN37Q96GY3 246 aaPredicted RBP10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 RTKNQ9BST9 563 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 SEMA6CQ9H3T2 930 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 C1GALT1Q9NS00 363 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 PCMTD2Q9NV79 361 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 UCKL1Q9NWZ5 548 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 TOR4AQ9NXH8 423 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 INVSQ9Y283 1065 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 TRBC2A0A5B9 178 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 TMEM120BA0PK00 339 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 CCDC78A2IDD5 438 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 C2orf74A8MZ97 194 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 MYL2P10916 166 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 NPPBP16860 134 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 CD1CP29017 333 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 ACTR1BP42025 376 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 ACTR1AP61163 376 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 PRDX1Q06830 199 aaKnown RBP10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 SPDYAQ5MJ70 313 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 SLCO4C1Q6ZQN7 724 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 CHST15Q7LFX5 561 aaPredicted RBP10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 SLITRK4Q8IW52 837 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 LSMEM2Q8N112 164 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 LMX1AQ8TE12 382 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 RNF112Q9ULX5 631 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 B4E171 279 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 TBX19O60806 448 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 CELA2BP08218 269 aaPredicted RBP10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 SMIM10L1P0DMW3 83 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 MAOBP27338 520 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 TSPAN7P41732 249 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 TRAF3Q13114 568 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 FAM91A1Q658Y4 838 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 CAPN13Q6MZZ7 669 aaPredicted RBP10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 AGTRAPQ6RW13 159 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 AMIGO1Q86WK6 493 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 CACUL1Q86Y37 369 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 D2HGDHQ8N465 521 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 DNAJC22Q8N4W6 341 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 AFAP1L2Q8N4X5 818 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 LILRA3Q8N6C8 439 aaPredicted RBP10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 AGAP11Q8TF27 550 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 SNX19Q92543 992 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 PTCD3Q96EY7 689 aaKnown RBP10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 SMIM10Q96HG1 83 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 APOLD1Q96LR9 279 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 C12orf66Q96MD2 445 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 EFCAB11Q9BUY7 163 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 MRGBPQ9NV56 204 aa10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 INTS7Q9NVH2 962 aaKnown RBP10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 SIDT1Q9NXL6 827 aaKnown RBP10.79□□□□□ -0.68
CSGALNACT2-201ENST00000374466 BTN3A1O00481 513 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 PREPP48147 710 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 CSHL1Q14406 222 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 UGT3A2Q3SY77 523 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 TMEM71Q6P5X7 295 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 DET1Q7L5Y6 550 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 CCL4L1Q8NHW4 92 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 WDR20Q8TBZ3 569 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 SREK1Q8WXA9 508 aaKnown RBP10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 UBE2E3Q969T4 207 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 LRFN5Q96NI6 719 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 ADAM29Q9UKF5 820 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 PADI4Q9UM07 663 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 EYSQ5T1H1 3165 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 A0A0J9YY10 115 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 TLCD2A6NGC4 264 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 OR7A17O14581 309 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 PPM1DO15297 605 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 SEMA3DO95025 777 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 SLC4A1P02730 911 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 HIST1H2AGP0C0S8 130 aaPredicted RBP10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 THRAP10827 490 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 HIST1H2ADP20671 130 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 LCP2Q13094 533 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 PRRT3Q5FWE3 981 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 TAF8Q7Z7C8 310 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 HIST1H2AHQ96KK5 128 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 ZNF317Q96PQ6 595 aaPredicted RBP10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 OR4K3Q96R72 315 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 HIST1H2AJQ99878 128 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 H2AFJQ9BTM1 129 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 DNAJC11Q9NVH1 559 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 VTI1BQ9UEU0 232 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 MAP4P27816 1152 aaKnown RBP10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 CSTF3Q12996 717 aaKnown RBP10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 GPR18Q14330 331 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 ZNF460Q14592 562 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 XKR7Q5GH72 579 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 FBXO39Q8N4B4 442 aa10.78□□□□□ -0.68
CSGALNACT2-201ENST00000374466 MFSD9Q8NBP5 474 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms