RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 ZNF267Q14586 743 aaPredicted RBP12.61□□□□□ -0.39
PRPF4-201ENST00000374198 GJC2Q5T442 439 aaPredicted RBP12.61□□□□□ -0.39
PRPF4-201ENST00000374198 TMPRSS11AQ6ZMR5 421 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 GPR149Q86SP6 731 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 CDH24Q86UP0 819 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 P3H2Q8IVL5 708 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 CCDC117Q8IWD4 279 aaPredicted RBP12.61□□□□□ -0.39
PRPF4-201ENST00000374198 OR8H1Q8NGG4 311 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 GPR151Q8TDV0 419 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 SH3RF2Q8TEC5 729 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 DNAJA4Q8WW22 397 aaPredicted RBP12.61□□□□□ -0.39
PRPF4-201ENST00000374198 C18orf25Q96B23 403 aaPredicted RBP12.61□□□□□ -0.39
PRPF4-201ENST00000374198 FAM149B1Q96BN6 582 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 PABPC5Q96DU9 382 aaKnown RBP12.61□□□□□ -0.39
PRPF4-201ENST00000374198 ZNF599Q96NL3 588 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 TBCDQ9BTW9 1192 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 C11orf54Q9H0W9 315 aaPredicted RBP12.61□□□□□ -0.39
PRPF4-201ENST00000374198 NRBP2Q9NSY0 501 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 PSORS1C1Q9UIG5 152 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 KIAA1217Q5T5P2 1943 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 PCP4L1A6NKN8 68 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 TRIM3O75382 744 aaPredicted RBP12.61□□□□□ -0.39
PRPF4-201ENST00000374198 SLC22A5O76082 557 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 TNNI3P19429 210 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 CHMP24386 653 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 WEE1P30291 646 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 TPI1P60174 286 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 DSTNP60981 165 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 RBP5P82980 135 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 YWHAHQ04917 246 aaPredicted RBP12.61□□□□□ -0.39
PRPF4-201ENST00000374198 INTS6LQ5JSJ4 861 aaKnown RBP12.61□□□□□ -0.39
PRPF4-201ENST00000374198 C6orf136Q5SQH8 315 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 ENTHD1Q8IYW4 607 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 FNDC5Q8NAU1 212 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 ZNF296Q8WUU4 475 aaPredicted RBP12.61□□□□□ -0.39
PRPF4-201ENST00000374198 NDRG1Q92597 394 aaKnown RBP12.61□□□□□ -0.39
PRPF4-201ENST00000374198 TRMT61AQ96FX7 289 aaKnown RBP12.61□□□□□ -0.39
PRPF4-201ENST00000374198 MSANTD3Q96H12 275 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 MYOCQ99972 504 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 ABCB8Q9NUT2 735 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 NME7Q9Y5B8 376 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 M0QYT0 321 aa12.6□□□□□ -0.39
PRPF4-201ENST00000374198 CREG1O75629 220 aa12.6□□□□□ -0.39
PRPF4-201ENST00000374198 SERPINA1P01009 418 aa12.6□□□□□ -0.39
PRPF4-201ENST00000374198 CSF2P04141 144 aa12.6□□□□□ -0.39
PRPF4-201ENST00000374198 CDK1P06493 297 aa12.6□□□□□ -0.39
PRPF4-201ENST00000374198 CPN2P22792 545 aa12.6□□□□□ -0.39
PRPF4-201ENST00000374198 CYP4F3Q08477 520 aa12.6□□□□□ -0.39
PRPF4-201ENST00000374198 OR4D1Q15615 310 aa12.6□□□□□ -0.39
PRPF4-201ENST00000374198 SLC35F1Q5T1Q4 408 aa12.6□□□□□ -0.39
PRPF4-201ENST00000374198 NUDT8Q8WV74 236 aa12.6□□□□□ -0.39
PRPF4-201ENST00000374198 ZNF668Q96K58 619 aaPredicted RBP12.6□□□□□ -0.39
PRPF4-201ENST00000374198 MAGEB10Q96LZ2 347 aaPredicted RBP12.6□□□□□ -0.39
PRPF4-201ENST00000374198 NUSAP1Q9BXS6 441 aaKnown RBP12.6□□□□□ -0.39
PRPF4-201ENST00000374198 IKZF5Q9H5V7 419 aa12.6□□□□□ -0.39
PRPF4-201ENST00000374198 ERVMER34-1Q9H9K5 563 aa12.6□□□□□ -0.39
PRPF4-201ENST00000374198 A0A0G2JLL6 359 aaPredicted RBP12.6□□□□□ -0.39
PRPF4-201ENST00000374198 EFCAB10A6NFE3 127 aa12.6□□□□□ -0.39
PRPF4-201ENST00000374198 FKTNO75072 461 aa12.6□□□□□ -0.39
PRPF4-201ENST00000374198 NRIP1P48552 1158 aa12.6□□□□□ -0.39
PRPF4-201ENST00000374198 RPL34P49207 117 aaKnown RBP12.6□□□□□ -0.39
PRPF4-201ENST00000374198 RPP38P78345 283 aaKnown RBP12.6□□□□□ -0.39
PRPF4-201ENST00000374198 QPRTQ15274 297 aa12.6□□□□□ -0.39
PRPF4-201ENST00000374198 PTCHD3Q3KNS1 767 aa12.6□□□□□ -0.39
PRPF4-201ENST00000374198 GNASQ5JWF2 1037 aa12.6□□□□□ -0.39
PRPF4-201ENST00000374198 CELF3Q5SZQ8 465 aaKnown RBP12.6□□□□□ -0.39
PRPF4-201ENST00000374198 SNX20Q7Z614 316 aa12.6□□□□□ -0.39
PRPF4-201ENST00000374198 PRRT2Q7Z6L0 340 aaPredicted RBP12.6□□□□□ -0.39
PRPF4-201ENST00000374198 TMC8Q8IU68 726 aa12.6□□□□□ -0.39
PRPF4-201ENST00000374198 TBC1D20Q96BZ9 403 aa12.6□□□□□ -0.39
PRPF4-201ENST00000374198 C1orf74Q96LT6 269 aa12.6□□□□□ -0.39
PRPF4-201ENST00000374198 PITX2Q99697 317 aa12.6□□□□□ -0.39
PRPF4-201ENST00000374198 ING3Q9NXR8 418 aa12.6□□□□□ -0.39
PRPF4-201ENST00000374198 SOWAHBA6NEL2 793 aa12.59□□□□□ -0.39
PRPF4-201ENST00000374198 NDUFA2O43678 99 aa12.59□□□□□ -0.39
PRPF4-201ENST00000374198 SERPINI2O75830 405 aa12.59□□□□□ -0.39
PRPF4-201ENST00000374198 HOXB6P17509 224 aaKnown RBP12.59□□□□□ -0.39
PRPF4-201ENST00000374198 IL1RNP18510 177 aa12.59□□□□□ -0.39
PRPF4-201ENST00000374198 DDCP20711 480 aa12.59□□□□□ -0.39
PRPF4-201ENST00000374198 ALAS2P22557 587 aa12.59□□□□□ -0.39
PRPF4-201ENST00000374198 ADORA2BP29275 332 aa12.59□□□□□ -0.39
PRPF4-201ENST00000374198 ADRA1BP35368 520 aa12.59□□□□□ -0.39
PRPF4-201ENST00000374198 KIR2DL3P43628 341 aa12.59□□□□□ -0.39
PRPF4-201ENST00000374198 CHRNA4P43681 627 aa12.59□□□□□ -0.39
PRPF4-201ENST00000374198 CRISP3P54108 245 aa12.59□□□□□ -0.39
PRPF4-201ENST00000374198 HMGCS2P54868 508 aa12.59□□□□□ -0.39
PRPF4-201ENST00000374198 OLR1P78380 273 aa12.59□□□□□ -0.39
PRPF4-201ENST00000374198 GALEQ14376 348 aa12.59□□□□□ -0.39
PRPF4-201ENST00000374198 GPR19Q15760 415 aa12.59□□□□□ -0.39
PRPF4-201ENST00000374198 TOR1AIP1Q5JTV8 583 aa12.59□□□□□ -0.39
PRPF4-201ENST00000374198 PM20D1Q6GTS8 502 aa12.59□□□□□ -0.39
PRPF4-201ENST00000374198 RNF130Q86XS8 419 aa12.59□□□□□ -0.39
PRPF4-201ENST00000374198 ZDHHC21Q8IVQ6 265 aa12.59□□□□□ -0.39
PRPF4-201ENST00000374198 PGBD5Q8N414 524 aa12.59□□□□□ -0.39
PRPF4-201ENST00000374198 OR10Q1Q8NGQ4 319 aa12.59□□□□□ -0.39
PRPF4-201ENST00000374198 NT5C3BQ969T7 300 aa12.59□□□□□ -0.39
PRPF4-201ENST00000374198 PYURFQ96I23 114 aa12.59□□□□□ -0.39
PRPF4-201ENST00000374198 NPY6RQ99463 290 aa12.59□□□□□ -0.39
PRPF4-201ENST00000374198 RAD9AQ99638 391 aa12.59□□□□□ -0.39
PRPF4-201ENST00000374198 SPATA9Q9BWV2 254 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms