RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 ARPC2O15144 300 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 AKAP10O43572 662 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 RFPL2O75678 378 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 RNASEH2AO75792 299 aaKnown RBP8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 PRSS23O95084 383 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 LDLRP01130 860 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 ANXA6P08133 673 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 EPCAMP16422 314 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 GJA1P17302 382 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 PRDX3P30048 256 aaKnown RBP8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 S100A3P33764 101 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 TNFRSF4P43489 277 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 ZFP36L2P47974 494 aaKnown RBP8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 NR1H2P55055 460 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 POLE2P56282 527 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 CHRNB3Q05901 458 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 RALGDSQ12967 914 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 ENPP2Q13822 863 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 VEZF1Q14119 521 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 ACOX1Q15067 660 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 RAB30Q15771 203 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 ATP6AP1Q15904 470 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 PTCHD3Q3KNS1 767 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 RUNDC3AQ59EK9 446 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 PPP2R2DQ66LE6 453 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 OR52E8Q6IFG1 317 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 NEK5Q6P3R8 708 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 UGT2A3Q6UWM9 527 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 DLEU7Q6UYE1 221 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 RNF111Q6ZNA4 994 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 Q6ZVL8 140 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 IKBIPQ70UQ0 350 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 RPS27LQ71UM5 84 aaKnown RBP8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 HSD11B1LQ7Z5J1 315 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 SPRED1Q7Z699 444 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 TMCO2Q7Z6W1 182 aaPredicted RBP8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 GPR149Q86SP6 731 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 SNX31Q8N9S9 440 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 TERB1Q8NA31 727 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 CHST14Q8NCH0 376 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 HIPK4Q8NE63 616 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 OR2T12Q8NG77 320 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 OR9I1Q8NGQ6 314 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 OR2T11Q8NH01 316 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 OR2L2Q8NH16 312 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 SKA2Q8WVK7 121 aaPredicted RBP8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 GTF2H4Q92759 462 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 BHMTQ93088 406 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 RAD51AP1Q96B01 352 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 NUS1Q96E22 293 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 ZNF764Q96H86 408 aaPredicted RBP8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 PKP2Q99959 881 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 RIOK2Q9BVS4 552 aaKnown RBP8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 RAB11FIP5Q9BXF6 653 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 ABCG8Q9H221 673 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 LINC00597Q9H2U6 94 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 NT5DC2Q9H857 520 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 PNPLA3Q9NST1 481 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 SPATA6Q9NWH7 488 aaPredicted RBP8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 CMTM6Q9NX76 183 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 CXXC1Q9P0U4 656 aaPredicted RBP8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 DLGAP2Q9P1A6 1054 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 THAP10Q9P2Z0 257 aaPredicted RBP8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 ZNF639Q9UID6 485 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 ACSL5Q9ULC5 683 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 SAMD4AQ9UPU9 718 aaKnown RBP8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 WNT6Q9Y6F9 365 aa8.48□□□□□ -1.05
SNRNP40-202ENST00000373720 DNAH12Q6ZR08 3092 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 KCNE1BA0A087WTH5 132 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 ELOVL7A1L3X0 281 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 MGAT4DA6NG13 374 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 ENO4A6NNW6 628 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 TTC34A8MYJ7 566 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 FAM220BPB1ANY3 271 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 KPNA3O00505 521 aaPredicted RBP8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 TOR1BO14657 336 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 GSTA4O15217 222 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 DNAJB5O75953 348 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 CCNDBP1O95273 360 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 RASAL1O95294 804 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 FKBP9O95302 570 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 HOXC4P09017 264 aaPredicted RBP8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 BCKDHAP12694 445 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 ADRB3P13945 408 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 CEBPBP17676 345 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 GGT1P19440 569 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 C5AR1P21730 350 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 KELP23276 732 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 HRH2P25021 359 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 PTX3P26022 381 aaPredicted RBP8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 KIR3DL1P43629 444 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 NRIP1P48552 1158 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 CCT8P50990 548 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 ARHGDIAP52565 204 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 AQP4P55087 323 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 RPL38P63173 70 aaKnown RBP8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 ACSM2AQ08AH3 577 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 CAMK1Q14012 370 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 TEAD4Q15561 434 aa8.47□□□□□ -1.05
SNRNP40-202ENST00000373720 CYP51A1Q16850 503 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms