RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 SLC13A3Q8WWT9 602 aa19.03■□□□□ 0.64
HDAC1-201ENST00000373548 ZNF514Q96K75 400 aaPredicted RBP19.03■□□□□ 0.64
HDAC1-201ENST00000373548 TRMT61BQ9BVS5 477 aaKnown RBP19.03■□□□□ 0.64
HDAC1-201ENST00000373548 RSPH9Q9H1X1 276 aaPredicted RBP19.03■□□□□ 0.64
HDAC1-201ENST00000373548 CLMPQ9H6B4 373 aa19.03■□□□□ 0.64
HDAC1-201ENST00000373548 NPIPB8E9PQR5 432 aa19.02■□□□□ 0.64
HDAC1-201ENST00000373548 VEGFDO43915 354 aa19.02■□□□□ 0.64
HDAC1-201ENST00000373548 POP7O75817 140 aaKnown RBP19.02■□□□□ 0.64
HDAC1-201ENST00000373548 KLC1Q07866 573 aa19.02■□□□□ 0.64
HDAC1-201ENST00000373548 ADAM15Q13444 863 aa19.02■□□□□ 0.64
HDAC1-201ENST00000373548 PWP1Q13610 501 aa19.02■□□□□ 0.64
HDAC1-201ENST00000373548 CST6Q15828 149 aa19.02■□□□□ 0.64
HDAC1-201ENST00000373548 XKR6Q5GH73 641 aa19.02■□□□□ 0.64
HDAC1-201ENST00000373548 AGBL4Q5VU57 503 aa19.02■□□□□ 0.64
HDAC1-201ENST00000373548 IFNEQ86WN2 208 aa19.02■□□□□ 0.64
HDAC1-201ENST00000373548 RNF175Q8N4F7 328 aa19.02■□□□□ 0.64
HDAC1-201ENST00000373548 FBXO15Q8NCQ5 510 aaPredicted RBP19.02■□□□□ 0.64
HDAC1-201ENST00000373548 CLHC1Q8NHS4 586 aa19.02■□□□□ 0.64
HDAC1-201ENST00000373548 CMTM7Q96FZ5 175 aa19.02■□□□□ 0.64
HDAC1-201ENST00000373548 COX14Q96I36 57 aa19.02■□□□□ 0.64
HDAC1-201ENST00000373548 HIC2Q96JB3 615 aa19.02■□□□□ 0.64
HDAC1-201ENST00000373548 PPM1MQ96MI6 270 aa19.02■□□□□ 0.64
HDAC1-201ENST00000373548 NEUROG3Q9Y4Z2 214 aa19.02■□□□□ 0.64
HDAC1-201ENST00000373548 PCYT1BQ9Y5K3 369 aaPredicted RBP19.02■□□□□ 0.64
HDAC1-201ENST00000373548 DOCK9Q9BZ29 2069 aa19.02■□□□□ 0.64
HDAC1-201ENST00000373548 IGLON5A6NGN9 336 aa19.01■□□□□ 0.63
HDAC1-201ENST00000373548 AQP12BA6NM10 295 aa19.01■□□□□ 0.63
HDAC1-201ENST00000373548 ARPC2O15144 300 aa19.01■□□□□ 0.63
HDAC1-201ENST00000373548 DLX2Q07687 328 aaPredicted RBP19.01■□□□□ 0.63
HDAC1-201ENST00000373548 CAMK2GQ13555 558 aaPredicted RBP19.01■□□□□ 0.63
HDAC1-201ENST00000373548 DOC2AQ14183 400 aa19.01■□□□□ 0.63
HDAC1-201ENST00000373548 C2orf27AQ580R0 203 aa19.01■□□□□ 0.63
HDAC1-201ENST00000373548 SPANXN4Q5MJ08 99 aa19.01■□□□□ 0.63
HDAC1-201ENST00000373548 CES5AQ6NT32 575 aa19.01■□□□□ 0.63
HDAC1-201ENST00000373548 ADAMTSL4Q6UY14 1074 aa19.01■□□□□ 0.63
HDAC1-201ENST00000373548 PRR23BQ6ZRT6 265 aa19.01■□□□□ 0.63
HDAC1-201ENST00000373548 C11orf96Q7Z7L8 435 aa19.01■□□□□ 0.63
HDAC1-201ENST00000373548 PTRH1Q86Y79 214 aaKnown RBP19.01■□□□□ 0.63
HDAC1-201ENST00000373548 SPPL2CQ8IUH8 684 aa19.01■□□□□ 0.63
HDAC1-201ENST00000373548 AQP12AQ8IXF9 295 aa19.01■□□□□ 0.63
HDAC1-201ENST00000373548 ZNF513Q8N8E2 541 aaPredicted RBP19.01■□□□□ 0.63
HDAC1-201ENST00000373548 ADCY4Q8NFM4 1077 aa19.01■□□□□ 0.63
HDAC1-201ENST00000373548 APIPQ96GX9 242 aa19.01■□□□□ 0.63
HDAC1-201ENST00000373548 CGREF1Q99674 301 aa19.01■□□□□ 0.63
HDAC1-201ENST00000373548 KCTD14Q9BQ13 255 aaPredicted RBP19.01■□□□□ 0.63
HDAC1-201ENST00000373548 TRIM15Q9C019 465 aa19.01■□□□□ 0.63
HDAC1-201ENST00000373548 BATF3Q9NR55 127 aa19.01■□□□□ 0.63
HDAC1-201ENST00000373548 GPR34Q9UPC5 381 aa19.01■□□□□ 0.63
HDAC1-201ENST00000373548 TMEM98Q9Y2Y6 226 aa19.01■□□□□ 0.63
HDAC1-201ENST00000373548 TICRRQ7Z2Z1 1910 aa19.01■□□□□ 0.63
HDAC1-201ENST00000373548 C17orf113A0A1B0GUU1 675 aa19.01■□□□□ 0.63
HDAC1-201ENST00000373548 CLGNO14967 610 aa19.01■□□□□ 0.63
HDAC1-201ENST00000373548 RPS14P62263 151 aaKnown RBP19.01■□□□□ 0.63
HDAC1-201ENST00000373548 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.01■□□□□ 0.63
HDAC1-201ENST00000373548 NUDT18Q6ZVK8 323 aa19.01■□□□□ 0.63
HDAC1-201ENST00000373548 CANT1Q8WVQ1 401 aa19.01■□□□□ 0.63
HDAC1-201ENST00000373548 USP22Q9UPT9 525 aa19.01■□□□□ 0.63
HDAC1-201ENST00000373548 PLIN5Q00G26 463 aa19■□□□□ 0.63
HDAC1-201ENST00000373548 PCDH1Q08174 1060 aa19■□□□□ 0.63
HDAC1-201ENST00000373548 SELPLGQ14242 412 aa19■□□□□ 0.63
HDAC1-201ENST00000373548 NFE2L1Q14494 772 aa19■□□□□ 0.63
HDAC1-201ENST00000373548 PNCKQ6P2M8 343 aa19■□□□□ 0.63
HDAC1-201ENST00000373548 HEATR4Q86WZ0 1026 aa19■□□□□ 0.63
HDAC1-201ENST00000373548 OR2L2Q8NH16 312 aa19■□□□□ 0.63
HDAC1-201ENST00000373548 WDR20Q8TBZ3 569 aa19■□□□□ 0.63
HDAC1-201ENST00000373548 HM13Q8TCT9 377 aa19■□□□□ 0.63
HDAC1-201ENST00000373548 ZNF480Q8WV37 535 aa19■□□□□ 0.63
HDAC1-201ENST00000373548 LRTOMTQ8WZ04 291 aa19■□□□□ 0.63
HDAC1-201ENST00000373548 GTF2H4Q92759 462 aa19■□□□□ 0.63
HDAC1-201ENST00000373548 UHRF1Q96T88 793 aaPredicted RBP19■□□□□ 0.63
HDAC1-201ENST00000373548 MUC13Q9H3R2 512 aa19■□□□□ 0.63
HDAC1-201ENST00000373548 SERGEFQ9UGK8 458 aa19■□□□□ 0.63
HDAC1-201ENST00000373548 SNX13Q9Y5W8 968 aa19■□□□□ 0.63
HDAC1-201ENST00000373548 AP1G1O43747 822 aa19■□□□□ 0.63
HDAC1-201ENST00000373548 IL6P05231 212 aa19■□□□□ 0.63
HDAC1-201ENST00000373548 PGRP06401 933 aa19■□□□□ 0.63
HDAC1-201ENST00000373548 PRPS2P11908 318 aa19■□□□□ 0.63
HDAC1-201ENST00000373548 UQCRBP14927 111 aa19■□□□□ 0.63
HDAC1-201ENST00000373548 TACR1P25103 407 aa19■□□□□ 0.63
HDAC1-201ENST00000373548 GALK1P51570 392 aa19■□□□□ 0.63
HDAC1-201ENST00000373548 CLDN8P56748 225 aa19■□□□□ 0.63
HDAC1-201ENST00000373548 IRAK1BP1Q5VVH5 260 aa19■□□□□ 0.63
HDAC1-201ENST00000373548 GRHL2Q6ISB3 625 aa19■□□□□ 0.63
HDAC1-201ENST00000373548 FAM83HQ6ZRV2 1179 aaPredicted RBP19■□□□□ 0.63
HDAC1-201ENST00000373548 TRMT11Q7Z4G4 463 aaKnown RBP19■□□□□ 0.63
HDAC1-201ENST00000373548 ICA1LQ8NDH6 482 aa19■□□□□ 0.63
HDAC1-201ENST00000373548 CATSPER1Q8NEC5 780 aa19■□□□□ 0.63
HDAC1-201ENST00000373548 FAM110BQ8TC76 370 aa19■□□□□ 0.63
HDAC1-201ENST00000373548 EZH1Q92800 747 aaPredicted RBP19■□□□□ 0.63
HDAC1-201ENST00000373548 PRKAB1Q9Y478 270 aa19■□□□□ 0.63
HDAC1-201ENST00000373548 MGAT4DA6NG13 374 aa18.99■□□□□ 0.63
HDAC1-201ENST00000373548 KCNH1O95259 989 aa18.99■□□□□ 0.63
HDAC1-201ENST00000373548 PCCBP05166 539 aa18.99■□□□□ 0.63
HDAC1-201ENST00000373548 MTHFD1P11586 935 aaKnown RBP18.99■□□□□ 0.63
HDAC1-201ENST00000373548 AMD1P17707 334 aa18.99■□□□□ 0.63
HDAC1-201ENST00000373548 SDC1P18827 310 aa18.99■□□□□ 0.63
HDAC1-201ENST00000373548 CCR3P51677 355 aa18.99■□□□□ 0.63
HDAC1-201ENST00000373548 MTPNP58546 118 aa18.99■□□□□ 0.63
HDAC1-201ENST00000373548 ZNF33BQ06732 778 aa18.99■□□□□ 0.63
HDAC1-201ENST00000373548 MAPKAPK3Q16644 382 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms