RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 C9orf50Q5SZB4 431 aa10.94□□□□□ -0.66
RPRD1B-201ENST00000373433 TXNDC11Q6PKC3 985 aa10.94□□□□□ -0.66
RPRD1B-201ENST00000373433 RFPL4BQ6ZWI9 263 aa10.94□□□□□ -0.66
RPRD1B-201ENST00000373433 CMTM8Q8IZV2 173 aa10.94□□□□□ -0.66
RPRD1B-201ENST00000373433 DYNC2LI1Q8TCX1 351 aa10.94□□□□□ -0.66
RPRD1B-201ENST00000373433 FRS2Q8WU20 508 aa10.94□□□□□ -0.66
RPRD1B-201ENST00000373433 LGALS12Q96DT0 336 aa10.94□□□□□ -0.66
RPRD1B-201ENST00000373433 SAMD11Q96NU1 681 aa10.94□□□□□ -0.66
RPRD1B-201ENST00000373433 MUC13Q9H3R2 512 aa10.94□□□□□ -0.66
RPRD1B-201ENST00000373433 NECTIN3Q9NQS3 549 aa10.94□□□□□ -0.66
RPRD1B-201ENST00000373433 CD274Q9NZQ7 290 aa10.94□□□□□ -0.66
RPRD1B-201ENST00000373433 ZNF639Q9UID6 485 aa10.94□□□□□ -0.66
RPRD1B-201ENST00000373433 RAP2AP10114 183 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 ARNTP27540 789 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 GABARAPL2P60520 117 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 UBE3AQ05086 875 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 TOP3AQ13472 1001 aaPredicted RBP10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 SIM2Q14190 667 aaPredicted RBP10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 NPTX1Q15818 432 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 SNAP47Q5SQN1 464 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 TTC23LQ6PF05 361 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 DOK6Q6PKX4 331 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 DCP2Q8IU60 420 aaKnown RBP10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 FAM86B1Q8N7N1 296 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 SPPL3Q8TCT6 385 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 BPIFB1Q8TDL5 484 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 HERVK_113Q902F9 699 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 CEP295NLQ96MC4 621 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 TRMOQ9BU70 441 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 ZBP1Q9H171 429 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 SEMA4BQ9NPR2 832 aaPredicted RBP10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 PCDHB9Q9Y5E1 797 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 A0A0D9SEW6 157 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 FAM172BPA6NC97 362 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 RGS13O14921 159 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 APOA1P02647 267 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 IL10RBQ08334 325 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 GALNT3Q14435 633 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 SYT16Q17RD7 645 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 PROSER1Q86XN7 944 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 PEX5LQ8IYB4 626 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 DTWD1Q8N5C7 304 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 NT5C3BQ969T7 300 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 MBOAT4Q96T53 435 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 SDR39U1Q9NRG7 319 aaPredicted RBP10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 CLDND1Q9NY35 253 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 INTS6Q9UL03 887 aaKnown RBP10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 N6AMT1Q9Y5N5 214 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 UPK1AO00322 258 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 ABLIM3O94929 683 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 PCMT1P22061 227 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 CDC20Q12834 499 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 ZFP69Q49AA0 526 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 LRRC73Q5JTD7 316 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 ARMC12Q5T9G4 340 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 FKBP9P1Q75LS8 142 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 BNIPLQ7Z465 357 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 ZNF557Q8N988 423 aaPredicted RBP10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 PAPD5Q8NDF8 572 aaKnown RBP10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 PHF10Q8WUB8 498 aaKnown RBP10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 DCSTAMPQ9H295 470 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 LEF1Q9UJU2 399 aaPredicted RBP10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 C3orf18Q9UK00 162 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 HCFC2Q9Y5Z7 792 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 WNT6Q9Y6F9 365 aa10.93□□□□□ -0.66
RPRD1B-201ENST00000373433 LRRC37A2A6NM11 1700 aa10.92□□□□□ -0.66
RPRD1B-201ENST00000373433 EFCAB9A8MZ26 197 aa10.92□□□□□ -0.66
RPRD1B-201ENST00000373433 LEFTY2O00292 366 aa10.92□□□□□ -0.66
RPRD1B-201ENST00000373433 BCKDKO14874 412 aa10.92□□□□□ -0.66
RPRD1B-201ENST00000373433 ANXA6P08133 673 aa10.92□□□□□ -0.66
RPRD1B-201ENST00000373433 EPB42P16452 691 aa10.92□□□□□ -0.66
RPRD1B-201ENST00000373433 IRS1P35568 1242 aa10.92□□□□□ -0.66
RPRD1B-201ENST00000373433 EEFSECP57772 596 aaKnown RBP10.92□□□□□ -0.66
RPRD1B-201ENST00000373433 FOXM1Q08050 763 aa10.92□□□□□ -0.66
RPRD1B-201ENST00000373433 SYTL3Q4VX76 610 aa10.92□□□□□ -0.66
RPRD1B-201ENST00000373433 HECTD2Q5U5R9 776 aa10.92□□□□□ -0.66
RPRD1B-201ENST00000373433 MRNIPQ6NTE8 343 aa10.92□□□□□ -0.66
RPRD1B-201ENST00000373433 GLT6D1Q7Z4J2 308 aa10.92□□□□□ -0.66
RPRD1B-201ENST00000373433 PTRH1Q86Y79 214 aaKnown RBP10.92□□□□□ -0.66
RPRD1B-201ENST00000373433 BBS7Q8IWZ6 715 aa10.92□□□□□ -0.66
RPRD1B-201ENST00000373433 ZNF540Q8NDQ6 660 aa10.92□□□□□ -0.66
RPRD1B-201ENST00000373433 TMEM246Q9BRR3 403 aa10.92□□□□□ -0.66
RPRD1B-201ENST00000373433 RHNO1Q9BSD3 238 aa10.92□□□□□ -0.66
RPRD1B-201ENST00000373433 OR2B2Q9GZK3 357 aa10.92□□□□□ -0.66
RPRD1B-201ENST00000373433 RIBC2Q9H4K1 309 aa10.92□□□□□ -0.66
RPRD1B-201ENST00000373433 ZDHHC6Q9H6R6 413 aa10.92□□□□□ -0.66
RPRD1B-201ENST00000373433 ABCB8Q9NUT2 735 aa10.92□□□□□ -0.66
RPRD1B-201ENST00000373433 MAGEL2Q9UJ55 1249 aa10.92□□□□□ -0.66
RPRD1B-201ENST00000373433 PCDHGC4Q9Y5F7 938 aa10.92□□□□□ -0.66
RPRD1B-201ENST00000373433 CABIN1Q9Y6J0 2220 aa10.92□□□□□ -0.66
RPRD1B-201ENST00000373433 LINC00854A0A1B0GVQ3 168 aa10.92□□□□□ -0.66
RPRD1B-201ENST00000373433 CENPBD1B2RD01 187 aa10.92□□□□□ -0.66
RPRD1B-201ENST00000373433 HLA-DQB2P05538 268 aa10.92□□□□□ -0.66
RPRD1B-201ENST00000373433 CD36P16671 472 aa10.92□□□□□ -0.66
RPRD1B-201ENST00000373433 PRKCAP17252 672 aa10.92□□□□□ -0.66
RPRD1B-201ENST00000373433 CTPS1P17812 591 aa10.92□□□□□ -0.66
RPRD1B-201ENST00000373433 ENDOUP21128 410 aaKnown RBP10.92□□□□□ -0.66
RPRD1B-201ENST00000373433 DNAJB1P25685 340 aa10.92□□□□□ -0.66
RPRD1B-201ENST00000373433 GRK3P35626 688 aa10.92□□□□□ -0.66
RPRD1B-201ENST00000373433 RFX3P48380 749 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms